Gene Symbol | CDIP1 |
Entrez Gene ID | 100512098 |
Full Name | cell death inducing p53 target 1 |
Synonyms | C16orf5,C3H16orf5 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
ORF » Species Summary » Sus scrofa » CDIP1 cDNA ORF clone
gRNAs
Gene Symbol | CDIP1 |
Entrez Gene ID | 100512098 |
Full Name | cell death inducing p53 target 1 |
Synonyms | C16orf5,C3H16orf5 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
XM_005662155.2 | XP_005662212.1 | cell death-inducing p53-target protein 1 isoform X1 |
NM_001244099.1 | NP_001231028.1 | cell death-inducing p53-target protein 1 |
XM_021085649.1 | XP_020941308.1 | cell death-inducing p53-target protein 1 isoform X1 |
XM_021085650.1 | XP_020941309.1 | cell death-inducing p53-target protein 1 isoform X1 |
XM_021085652.1 | XP_020941311.1 | cell death-inducing p53-target protein 1 isoform X1 |
XM_021085653.1 | XP_020941312.1 | cell death-inducing p53-target protein 1 isoform X1 |
XM_005662155.3 | XP_005662212.1 | cell death-inducing p53-target protein 1 isoform X1 |
XM_021085651.1 | XP_020941310.1 | cell death-inducing p53-target protein 1 isoform X1 |
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags.
Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, J?rgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staefeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornsh?j H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M
Genome biology8(4)R45(2007)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
Porcine gene discovery by normalized cDNA-library sequencing and EST cluster assembly.
Fahrenkrug SC, Smith TP, Freking BA, Cho J, White J, Vallet J, Wise T, Rohrer G, Pertea G, Sultana R, Quackenbush J, Keele JW
Mammalian genome : official journal of the International Mammalian Genome Society13(8)475-8(2002 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CDIP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CDIP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | NM_001244099.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-06 | |
Organism | Sus scrofa(pig) | |
Product | cell death-inducing p53-target protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BE030992.1, DV935711.1, AEMK02000018.1 and EW093566.2. On Sep 15, 2011 this sequence version replaced XM_003124637.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5275317.230215.1, GFLN01097328.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA103886111, SAMEA103886114 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001231028.1 |
CDS | 147..773 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | XM_005662155.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | cell death-inducing p53-target protein 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609801.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005662155.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005662212.1 |
CDS | 231..857 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | XM_021085649.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | cell death-inducing p53-target protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020941308.1 |
CDS | 493..1119 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | XM_021085650.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | cell death-inducing p53-target protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020941309.1 |
CDS | 495..1121 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | XM_021085652.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | cell death-inducing p53-target protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020941311.1 |
CDS | 364..990 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | XM_021085653.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | cell death-inducing p53-target protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020941312.1 |
CDS | 365..991 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | XM_005662155.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | cell death-inducing p53-target protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005662155.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005662212.1 |
CDS | 267..893 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe06874 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662155.2 , NM_001244099.1 , XM_021085649.1 , XM_021085650.1 , XM_021085652.1 , XM_021085653.1 , XM_005662155.3 , XM_021085651.1 | |
Accession Version | XM_021085651.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | cell death-inducing p53-target protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020941310.1 |
CDS | 395..1021 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCGAATG AGCCGCCCCC CCCTTACCCC GGAGGCCCCA CAGCCCCGCT TCTGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |
Porcine gene discovery by normalized cDNA-library sequencing and EST cluster assembly. |