| Gene Symbol |
col9a2 |
| Entrez Gene ID |
100036633 |
| Full Name |
collagen, type IX, alpha 2 |
| General protein information |
- Preferred Names
collagen, type IX, alpha 2
Names
collagen alpha-2(IX) chain
|
| Gene Type |
protein-coding |
| Organism |
Xenopus tropicalis(tropical clawed frog) |
mRNA and Protein(s)
| mRNA |
Protein |
Name |
| NM_001097192.1 |
NP_001090661.1 |
collagen alpha-2(IX) chain precursor |
| Pan troglodytes (chimpanzee) |
COL9A2 |
XP_003949434.1 |
| Canis lupus familiaris (dog) |
COL9A2 |
NP_001184099.1 |
| Xenopus tropicalis (tropical clawed frog) |
col9a2 |
NP_001090661.1 |
|
COL9A2 |
XP_001082953.2 |
| Bos taurus (cattle) |
COL9A2 |
XP_002686588.2 |
| Mus musculus (house mouse) |
Col9a2 |
NP_031767.2 |
| Rattus norvegicus (Norway rat) |
Col9a2 |
NP_001102145.1 |
| Danio rerio (zebrafish) |
col9a2 |
NP_997744.1 |
| Gallus gallus (chicken) |
COL9A2 |
NP_001258917.1 |
| Homo sapiens (human) |
COL9A2 |
NP_001843.1 |
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following col9a2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the col9a2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID |
OXa22276 |
| Clone ID Related Accession (Same CDS sequence) |
NM_001097192.1
|
| Accession Version |
NM_001097192.1 Latest version! |
Documents for ORF clone product in default vector |
| Sequence Information |
ORF Nucleotide Sequence (Length: 2061bp)
Protein sequence
SNP |
| Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
 User Manual |
| Clone information |
Clone Map |
MSDS |
| Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
| ORF Insert Method |
CloneEZ™ Seamless cloning technology |
| Insert Structure |
linear |
| Update Date |
2019-12-21 |
| Organism |
Xenopus tropicalis(tropical clawed frog) |
| Product |
collagen alpha-2(IX) chain precursor |
| Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC127300.1.
##Evidence-Data-START##
Transcript exon combination :: BC127300.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMD00028291, SAMD00028292 [ECO:0000348]
##Evidence-Data-END##
|
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
| ATGGTCAGCT CCTGGGTCAG CCTCCGATTC TCTGTGATAC TTCACCTCGT CTGCCTGTCT
CTGGCACAGT TTACTGGTCC ACCAGGAGAG CCAGGTCCTC GTGGCCCTCC AGGCCCATCA
GGAATTCCAG GATCAGATGG CATTGATGGT GATCGAGGGC CTCCAGGGAT TGGACCAGCG
GGTTCTAAAG GCGATCCTGG CCCTCCTGGA CCAGACGGAC CTCCTGGTGA ACCTGGTATT
GATGGTCTGA TAGGAGCTAA AGGAGATCCA GGCCCTGCAG GGCGTCCAGG CTCAAAAGGA
CAGCCTGGGC TACCTGGACC ATCAGGAAAG ACAGGTCCTG GAATTGCTGG ACTTCCAGGT
AACCCTGGAC CAGTTGGTCT TCCTGGAGAA ATAGGAGCTA CAGGCCCCAA GGGCATACGT
GGACAATCTG GACCTGCAGG GCCCCCAGGA CCACCTGGTA AACCAGGACC TTCAGGAAAC
ATCCAGGGCT TGGAAGGCAG TGCAGATTTC CTGTGTCCTT CAAATTGCCC AGCAGGACCT
AAAGGACCAC AAGGACTGCA GGGGGTAAAG GGACATAAGG GTCGTCCAGG ACCATTGGGA
GAATCAGGAT TACAAGGGGC CCCGGGTCAA AAGGGAGATG TTGGGATTTC TGGAGAGCAA
GGAATTCCAG GACCACCGGG CCCTCAGGGA ATCCGTGGCT TCCCAGGATT GGAAGGACCT
AAGGGTGAAA CTGGCCCCGT TGGATATAAA GGAATGATTG GATCAGTTGG AGCCGCAGGA
AAGCCAGGTG AAGAGGGTCC TAAAGGGCCT CCTGGACCCC CAGGTGAAAA AGGAGACAGG
GGAGCTCGTG GTGTCATTGG ACAGATTGGA GGCATGGGAC CAAAAGGCAC CAATGGCCTT
CCTGGAATTG ATGGAAAAGA TGGCACCCCA GGCCTTGCTG GACTGAAGGG TAGCCCTGGT
CAAAATGGAA TGCCTGGTGG TCCCGGTCAC CAAGGATTAG CTGGTTTGCC TGGTCAACCT
GGAACTAAGG GTGCTCTTGG TGAAAAGGGT GAGCCCGGCT CTCGGGGAGA GCCAGGATTT
ACAGGTGCAC CTGGAAAGCA GGGAGAAAGA GGACCCCCTG GAGAAGCTGG CCCCAGAGGA
ATTGCAGGTG CCAAGGGAGA TCGTGGAGAG AGGGGACCAG TTGGACCAGT TGGACTTCAA
GGGAAAGTTG GCACAAAGGG TGAACAGGGC CCTCCTGGTG TCCCAGGTCC CCAGGGTCTT
CCTGGAGTAA AAGGGAGCAA GGGTTTCCCC GGAAAAGTTG GAACAAAAGG AGATGTGGGA
GATCCAGGAG TTGAAGGATT GGCCGGTGAC AAGGGTGAGA AGGGTGAATC TGGAGAACCA
GGACCTAAAG GACAGCAAGG TGTGCATGGA GAACTGGGTT ACAACGGACC AACTGGAGAC
CCAGGTATGC CTGGAGTACA AGGCCTTCCT GGGTCACCAG GGCCAAGAGG ACTTAATGGA
GAGAGAGGTG TTCCAGGGAT GCCAGGAAAT CAAGGAGTGC CGGGCCGGGA TACTAGTGAC
CAACACATTG TAGAAGTGGT TTTGAAAATG TTGCAAGAAA ATCTTGCAGC TGTTGCTGTC
AGTGCCAAGC GTGCAGCCCT TGGTGGAGCT GGTATCATGG GACCCCCTGG ACCACCTGGC
CCCCCAGGAC CACCAGGAGA ACAAGGACCT CATGGACACG TTGGTCCACG TGGTATTCCA
GGCATTGTGG GTGTAATGGG TCAGGTTGGA AACACAGGAC CCAAAGGCAA GAGGGGAGAA
AAAGGTGATC GGGGAGAGAC AGGACGTGGG CACCAAGGTT TACCTGGACC TCCTGGAATT
CCAGGTCTTC CTGGCATTCC CGGTCACTCT ATTGATGGAA AAGATGGTGA GAGAGGTCCA
CAAGGGGCAG CAGGAGAGCC TGGAAGACCT GGGCTCCCTG GACCAGCAGG TCTCCCAGGG
TTCTGCGAGG CAGCGGCATG TTTGGCAGCC TCTGCTTATG CTCCAGCATC TCTGACTGAA
CCAGGCACCA TTAAGGGTTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq |
NP_001090661.1 |
| CDS | 163..2223 |
| Translation | |
Target ORF information:
| RefSeq Version | NM_001097192.1 |
| Organism | Xenopus tropicalis(tropical clawed frog) |
| Definition | Xenopus tropicalis collagen, type IX, alpha 2 (col9a2), mRNA. |
Target ORF information:
| Epitope | DYKDDDDK |
| Bacterial selection | AMPR |
| Mammalian selection | NeoR |
| Vector | pcDNA3.1+/C-(K)DYK |
|
 NM_001097192.1 |
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
| ATGGTCAGCT CCTGGGTCAG CCTCCGATTC TCTGTGATAC TTCACCTCGT CTGCCTGTCT
CTGGCACAGT TTACTGGTCC ACCAGGAGAG CCAGGTCCTC GTGGCCCTCC AGGCCCATCA
GGAATTCCAG GATCAGATGG CATTGATGGT GATCGAGGGC CTCCAGGGAT TGGACCAGCG
GGTTCTAAAG GCGATCCTGG CCCTCCTGGA CCAGACGGAC CTCCTGGTGA ACCTGGTATT
GATGGTCTGA TAGGAGCTAA AGGAGATCCA GGCCCTGCAG GGCGTCCAGG CTCAAAAGGA
CAGCCTGGGC TACCTGGACC ATCAGGAAAG ACAGGTCCTG GAATTGCTGG ACTTCCAGGT
AACCCTGGAC CAGTTGGTCT TCCTGGAGAA ATAGGAGCTA CAGGCCCCAA GGGCATACGT
GGACAATCTG GACCTGCAGG GCCCCCAGGA CCACCTGGTA AACCAGGACC TTCAGGAAAC
ATCCAGGGCT TGGAAGGCAG TGCAGATTTC CTGTGTCCTT CAAATTGCCC AGCAGGACCT
AAAGGACCAC AAGGACTGCA GGGGGTAAAG GGACATAAGG GTCGTCCAGG ACCATTGGGA
GAATCAGGAT TACAAGGGGC CCCGGGTCAA AAGGGAGATG TTGGGATTTC TGGAGAGCAA
GGAATTCCAG GACCACCGGG CCCTCAGGGA ATCCGTGGCT TCCCAGGATT GGAAGGACCT
AAGGGTGAAA CTGGCCCCGT TGGATATAAA GGAATGATTG GATCAGTTGG AGCCGCAGGA
AAGCCAGGTG AAGAGGGTCC TAAAGGGCCT CCTGGACCCC CAGGTGAAAA AGGAGACAGG
GGAGCTCGTG GTGTCATTGG ACAGATTGGA GGCATGGGAC CAAAAGGCAC CAATGGCCTT
CCTGGAATTG ATGGAAAAGA TGGCACCCCA GGCCTTGCTG GACTGAAGGG TAGCCCTGGT
CAAAATGGAA TGCCTGGTGG TCCCGGTCAC CAAGGATTAG CTGGTTTGCC TGGTCAACCT
GGAACTAAGG GTGCTCTTGG TGAAAAGGGT GAGCCCGGCT CTCGGGGAGA GCCAGGATTT
ACAGGTGCAC CTGGAAAGCA GGGAGAAAGA GGACCCCCTG GAGAAGCTGG CCCCAGAGGA
ATTGCAGGTG CCAAGGGAGA TCGTGGAGAG AGGGGACCAG TTGGACCAGT TGGACTTCAA
GGGAAAGTTG GCACAAAGGG TGAACAGGGC CCTCCTGGTG TCCCAGGTCC CCAGGGTCTT
CCTGGAGTAA AAGGGAGCAA GGGTTTCCCC GGAAAAGTTG GAACAAAAGG AGATGTGGGA
GATCCAGGAG TTGAAGGATT GGCCGGTGAC AAGGGTGAGA AGGGTGAATC TGGAGAACCA
GGACCTAAAG GACAGCAAGG TGTGCATGGA GAACTGGGTT ACAACGGACC AACTGGAGAC
CCAGGTATGC CTGGAGTACA AGGCCTTCCT GGGTCACCAG GGCCAAGAGG ACTTAATGGA
GAGAGAGGTG TTCCAGGGAT GCCAGGAAAT CAAGGAGTGC CGGGCCGGGA TACTAGTGAC
CAACACATTG TAGAAGTGGT TTTGAAAATG TTGCAAGAAA ATCTTGCAGC TGTTGCTGTC
AGTGCCAAGC GTGCAGCCCT TGGTGGAGCT GGTATCATGG GACCCCCTGG ACCACCTGGC
CCCCCAGGAC CACCAGGAGA ACAAGGACCT CATGGACACG TTGGTCCACG TGGTATTCCA
GGCATTGTGG GTGTAATGGG TCAGGTTGGA AACACAGGAC CCAAAGGCAA GAGGGGAGAA
AAAGGTGATC GGGGAGAGAC AGGACGTGGG CACCAAGGTT TACCTGGACC TCCTGGAATT
CCAGGTCTTC CTGGCATTCC CGGTCACTCT ATTGATGGAA AAGATGGTGA GAGAGGTCCA
CAAGGGGCAG CAGGAGAGCC TGGAAGACCT GGGCTCCCTG GACCAGCAGG TCTCCCAGGG
TTCTGCGAGG CAGCGGCATG TTTGGCAGCC TCTGCTTATG CTCCAGCATC TCTGACTGAA
CCAGGCACCA TTAAGGGTTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
