| Gene Symbol |
slit1 |
| Entrez Gene ID |
100036682 |
| Full Name |
slit guidance ligand 1 |
| Synonyms |
Xslit,megf4,slil1,slit-1,slit3 |
| General protein information |
- Preferred Names
slit guidance ligand 1
Names
slit homolog 1 protein
slit homolog 1
|
| Gene Type |
protein-coding |
| Organism |
Xenopus tropicalis(tropical clawed frog) |
mRNA and Protein(s)
| mRNA |
Protein |
Name |
| XM_012965817.2 |
XP_012821271.1 |
slit homolog 1 protein isoform X1 |
| NM_001097233.1 |
NP_001090702.1 |
slit homolog 1 protein precursor |
| Pan troglodytes (chimpanzee) |
SLIT1 |
XP_003312806.1 |
| Homo sapiens (human) |
SLIT1 |
NP_003052.2 |
| Bos taurus (cattle) |
SLIT1 |
XP_002698459.1 |
| Xenopus tropicalis (tropical clawed frog) |
slit1 |
NP_001090702.1 |
|
SLIT1 |
XP_001094231.2 |
| Canis lupus familiaris (dog) |
SLIT1 |
XP_005637640.1 |
| Mus musculus (house mouse) |
Slit1 |
NP_056563.2 |
| Rattus norvegicus (Norway rat) |
Slit1 |
NP_075242.1 |
| Gallus gallus (chicken) |
SLIT1 |
NP_001264265.1 |
| Danio rerio (zebrafish) |
slit1a |
NP_001030140.1 |
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following slit1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the slit1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID |
OXa23016 |
| Clone ID Related Accession (Same CDS sequence) |
NM_001097233.1
|
| Accession Version |
NM_001097233.1 Latest version! |
Documents for ORF clone product in default vector |
| Sequence Information |
ORF Nucleotide Sequence (Length: 4590bp)
Protein sequence
SNP |
| Vector |
pcDNA3.1-C-(k)DYK or customized vector |
 User Manual |
| Clone information |
Clone Map |
MSDS |
| Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
| ORF Insert Method |
CloneEZ™ Seamless cloning technology |
| Insert Structure |
linear |
| Update Date |
2019-12-21 |
| Organism |
Xenopus tropicalis(tropical clawed frog) |
| Product |
slit homolog 1 protein precursor |
| Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135997.1.
##Evidence-Data-START##
Transcript exon combination :: BC135997.1, BC128626.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350]
##Evidence-Data-END##
|
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
| ATGGATGCCA AGGGCTCTCC TACCTTCCCA TTGTGGCTCC GAGCTGGAGT ATGGATACTG
GCATGGAGCT GGATCTGCCA AGTGTGTGCC AATGGCTGCC CGGCATTGTG TACCTGCAGT
GGCACCACAG TGGATTGTCA TGGCTTGGCA CTAAAGGGGG TCCCCAAGAA CATCCCCAGG
AGCACGGAGA GGCTGGAGCT GTATGGGAAC AACATTACAC GGATCAATAA GAACGACTTC
TCTGGACTTA AGCAACTGAG AGTTTTGCAA CTAATGGAAA ATCAGATTAG CAATGTTGAA
CGTGGAGCTT TTGACGACAT GAAGGAACTC GAGAGACTGC GCCTGAACCG TAACCAGCTG
CACACATTGC CGGAACTTCT CTTCCAGAAT AACCAGGCCC TGTCCAGACT AGATCTGAGT
GAGAATTTAA TCCAAGCCAT TCCGAGGAAA ACATTTAGAG GAGCTACGGA ACTCAAGAAC
CTCCAACTGG ATAAGAACCA GATCAGCTGC ATTGAAGATG GAGCTTTCCG GGCTCTAAGA
GGACTGGAGG TTTTAACTCT GAATAACAAC AACATAACTG CAATTCCTGT TTCCAGTTTC
AACCATATGC CCAAACTGAG GACATTCCGT CTGCATTCTA ACAACTTGTT TTGTGACTGC
CATTTGGCCT GGCTCTCCCA GTGGCTACGC CAGCGGCCAA CCATTGGACT TTTCACACAG
TGCACTGGAC CGTCTCCACT TCGAGGCCTC AACGTGGCAG AGATCCAGAA GCACGAGTTC
AGCTGCTCAG GTCAGTCTGA TCCCCCTAGT TCCCAGATCT GCAGCCTCTC CATTGGGTCC
TGTCCAGCTA TGTGCACCTG CAGCAATGGC ATTGTAGACT GTCGGGGGAA AGGCCTCACA
GCAATACCTG CAAATCTCCC CGAAACCATG ACAGAAATAC GCTTGGAGCT CAATGGTATC
AAATCTGTTC CACCTGGTGC CTTCTCACCC TATAAGAAGC TGCGCAGAAT AGACCTGAGC
AACAACCAAA TCTCAGAGAT CGCCCCCGAC GCTTTCCAGG GTCTCCGCTC GCTTAATTCC
CTGGTTTTAT ATGGCAACAA AATTACAGAC CTTCCCAAAG GTGTGTTTAG TGGTCTTCAT
GCCTTGCAGC TGCTACTTCT CAACGCCAAC AAAATAAACT GCATCCGAGC TGACACCTTC
CAGGACTTAC AAAACCTGTC CCTCCTGTCA CTTTATGACA ACAAGATTCA GAGTTTGGCG
AAAGGCACCT TTGCAGCTCT ACGTGCTATC CAGACTCTAC ACTTGGCGCA GAATCCTTTT
ATCTGTGACT GCAATTTGAA GTGGCTGGCA GACTTTCTGA GAACAAACCC CATTGAGACG
AGTGGAGCCC GATGTGCAAG CCCCCGGCGA CTCGCCAACA AGCGCATTGG GCAGATTAAA
AGCAAAAAGT TCCGATGTTC AGCCAAGGAA CAATATTTTA TTCCAGGGAC AGAGGATTAT
CAGTTGAACA GTGAATGTAA CAGCGATGTG GTGTGTCCCC CCAAGTGCCG ATGTGAATCC
AACGTGGTGG ATTGCTCAAA CCTGAAGCTC ACCAAGATCC CCGACCGTAT TCCCCAATCC
ACGGCAGAGC TGCGCTTGAA CAACAATGAA ATTGCTACCC TTGAGGCCAC TGGTCTATTC
AGGAAACTCC CACACCTCAA GAAAATAAAC CTGAGCAACA ACAAAATTTC TGAAATAGAA
GACGCGGCGT TCGAAGGGGC AGCATCTGTC AGTGAGTTAC ATCTGACGGC CAATCATTTG
GAGTCGGTTC GCAGCGGAAT GTTCCGGGGC CTGGAAGGAC TGAGGACGCT AATGCTACGG
AATAACCGGG TCAGTTGTGT CCATAATGAC AGCTTTACCG GCCTGAGGAA CGTTCGGCTT
CTCTCTCTAT ATGATAACCA GATAAGCACC ATCACCCCAG GAGCATTCGA CACTTTGCAG
TCACTTTCTA CTCTGAACTT GCTGGCTAAC CCATTTAACT GCAACTGCCA ACTGGCTTGG
CTCGGGGACT GGCTGAGGAA GAGGAAGATA GTAACTGGAA ATCCACGTTG CCAAAACCCA
GACTTCCTGA GACAGATCCC TCTGCAGGAT GTGGCCTTTC CGGATTTCAG ATGTGAAGAT
GGTCAGGAAG AGCTGAGTTG TGCGCCCCAA CCTCAGTGCC CCCAAGAATG CACCTGCCTG
GACACTGTTG TACGCTGCAG CAACAAGCAC CTCTTATCAT TGCCCAAGGG AATTCCAAAG
AATGTCACAG AGCTTTACCT GGATGGTAAT CAGTTTACTA TGGTACCCGG ACAGCTCTCC
AGTTTCAAAT ATCTGCAGCT GGTGGATCTA AGCAACAACA AAATCAGTTC CCTGAGTAAC
TCCTCCTTTA CCAACATGAG CCAACTCACC ACACTGATCC TAAGCTATAA TTCCTTGCAG
TGTATACCTC CTTTGGCTTT TGAGGGTCTT CGGTCCTTAA GATTGCTGTC TGTCCATGGG
AATGATATCT CCAGCCTTCC AGAAGGGATC TTTTCTGATG TCACCTCTCT TTCCCATCTA
GCTATTGGTG CCAACCCACT ATATTGTGAT TGTAACTTAC GCTGGCTGTC AAACTGGGTG
AAAACCGGTT ACAAGGAGCC TGGTATCGCC CGCTGTACTG GACCTCCGGA AATGGATGGC
AAGCTGCTTC TTACAACTCC CGCCAAAAAG TTTGAATGCA ATGGGCCTCC AAGCTTGAAT
ATTCTGGCCA AATGCAACCC CTGTCTCTCA GATCCTTGTA AAAACCAAGG TACCTGTCAA
GATGACGCTG TGCAGTACTA CAAGTGCGTT TGTCCTGCTG GCTTCAAGGG CAAAAATTGT
GAAATCTCCC TGAACGCGTG TTCCAGTAAC CCCTGCGAGA ATCAGGGACT GTGTCTTTCC
AAAGAAGAAG GAAGTGGATT TATGTGCACG TGTGCAGATG GATTCGAGGG CCCAACGTGT
GCTGTCAATA AAGATGACTG CAAATACAGT GACTGTGAAA ATGGTGGTAC CTGTTTAGAT
GGAATAAATA ACTACACCTG CTTGTGCCCC TCACAATACA CAGGTGAATA TTGTGAGCAC
CTTGTGGACA TTTGCTCAAC AGACTTGAAT CCTTGTCATA GTGACTCCAA ATGCACCGTG
ACACCCGAGG GCCCAAAGTG TGAGTGTGCC CCGGGCTATG GAGGAGATGA CTGCAGCCTG
AATTACGATG ACTGCAAGGA CCACCGCTGT CAGAATAATG CCCTGTGCGT GGATGAGGTC
AATGGATATT CTTGTCTCTG CACTGAGGGT TACAGCGGGC AGCTTTGTGA AATGCCATCC
CAAGCCCCTT CTCCATGTAA ACTAACACCA TGCCAGAATG GTGCCAACTG TATTGAGGTG
GGGAACAGCG CAGTGTGCCA GTGTCTCCCA GGCTTCGGAG GATCAAAGTG TGAGAAACTG
CTGAGCGTAA ACTTTGTGGA TAGAGATACG TATTTGCAAT TTACCGACCT GCAGAACTGG
CCCCGGGCAA ACATCACACT TCAGGTGTCA ACAGCGGAAG ACAATGGAAT TCTACTGTAC
AATGGAGACC ACGACCATAT GGCAGTAGAG TTATATCAAG GCCACGTCAG GGTCAGTTAT
GACCCCGGAA GCTTTCCCAG CTCTGCAATT TACAGTGCAG AGACCATCAA TGATGGGCAG
TTCCATACCG TGGAGTTGGT TACATTTGAC CAGATGGTTA ATCTGTCCAT TGACGGAGGG
GCGCCCATGA CAATGGATAA GTTTGGGAAA CATTATACCC TTAATAGTGA AGCACCTCTA
TATGTGGGAG GTATGCCCGT CGATGTCAAC TCTGCCGCTT TTAGACTCTG GCAAATCCTT
AATGGAACCA GTTTTCATGG CTGCATCCGG AACCTGTATA TCAATAACGA GCTGCAGGAT
TTTACCAAAA CCCAAATGAA GCCCGGAGTT GTGCCAGGCT GTGAACCATG TCGAAAACTC
TTTTGCCTTC ATGGAATATG TCAGCCCAAT GCAGCAAATG GACCAGTATG CCACTGTGAG
ACTGGGTGGG CTGGGCCACA CTGCGACCAA CAGCTAAATG ATCCCTGTCA AGGTCACAAA
TGTGTCCATG GAGCTTGCAT GCCATTGGAC GCTCTAACGT ACAGCTGCCT GTGCCAGGAT
GGGTACAAAG GTGCCCTATG CAACCAGCAA GGAGAGCTCT ACAATCCATG TAAAACTCTG
CAGTGCCAGC ACGGGCGCTG TCAGATCTCC GACCTGGGCG AAGCCTATTG CGAGTGCGAG
AGCGGCTATG TGGGAGACAA TTGCGATCAA GAATCGGAAT GCCGAGGGGA GCCCGTGCGG
GATTATTACC AAGTACAGCG AGGCTATGCC ATTTGCCAAA CCACACGCAC CGTGTCCTGG
GTGGAATGCC GTGGTTCCTG CCACAATCAG GGCTGCTGCA CTGGATTACG CATGAAGCGC
CGGAAGTACA CTTTCGAGTG CAGCGACGGA TCCTCCTTTG TGGAAGATGT AGAGAAACCC
ATTAAATGTG GGTGTGCTCA GTGTGTGTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq |
NP_001090702.1 |
| CDS | 400..4989 |
| Translation | |
Target ORF information:
| RefSeq Version | NM_001097233.1 |
| Organism | Xenopus tropicalis(tropical clawed frog) |
| Definition | Xenopus tropicalis slit guidance ligand 1 (slit1), mRNA. |
Target ORF information:
| Epitope | DYKDDDDK |
| Bacterial selection | AMPR |
| Mammalian selection | NeoR |
| Vector | pcDNA3.1+/C-(K)DYK |
|
 NM_001097233.1 |
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
| ATGGATGCCA AGGGCTCTCC TACCTTCCCA TTGTGGCTCC GAGCTGGAGT ATGGATACTG
GCATGGAGCT GGATCTGCCA AGTGTGTGCC AATGGCTGCC CGGCATTGTG TACCTGCAGT
GGCACCACAG TGGATTGTCA TGGCTTGGCA CTAAAGGGGG TCCCCAAGAA CATCCCCAGG
AGCACGGAGA GGCTGGAGCT GTATGGGAAC AACATTACAC GGATCAATAA GAACGACTTC
TCTGGACTTA AGCAACTGAG AGTTTTGCAA CTAATGGAAA ATCAGATTAG CAATGTTGAA
CGTGGAGCTT TTGACGACAT GAAGGAACTC GAGAGACTGC GCCTGAACCG TAACCAGCTG
CACACATTGC CGGAACTTCT CTTCCAGAAT AACCAGGCCC TGTCCAGACT AGATCTGAGT
GAGAATTTAA TCCAAGCCAT TCCGAGGAAA ACATTTAGAG GAGCTACGGA ACTCAAGAAC
CTCCAACTGG ATAAGAACCA GATCAGCTGC ATTGAAGATG GAGCTTTCCG GGCTCTAAGA
GGACTGGAGG TTTTAACTCT GAATAACAAC AACATAACTG CAATTCCTGT TTCCAGTTTC
AACCATATGC CCAAACTGAG GACATTCCGT CTGCATTCTA ACAACTTGTT TTGTGACTGC
CATTTGGCCT GGCTCTCCCA GTGGCTACGC CAGCGGCCAA CCATTGGACT TTTCACACAG
TGCACTGGAC CGTCTCCACT TCGAGGCCTC AACGTGGCAG AGATCCAGAA GCACGAGTTC
AGCTGCTCAG GTCAGTCTGA TCCCCCTAGT TCCCAGATCT GCAGCCTCTC CATTGGGTCC
TGTCCAGCTA TGTGCACCTG CAGCAATGGC ATTGTAGACT GTCGGGGGAA AGGCCTCACA
GCAATACCTG CAAATCTCCC CGAAACCATG ACAGAAATAC GCTTGGAGCT CAATGGTATC
AAATCTGTTC CACCTGGTGC CTTCTCACCC TATAAGAAGC TGCGCAGAAT AGACCTGAGC
AACAACCAAA TCTCAGAGAT CGCCCCCGAC GCTTTCCAGG GTCTCCGCTC GCTTAATTCC
CTGGTTTTAT ATGGCAACAA AATTACAGAC CTTCCCAAAG GTGTGTTTAG TGGTCTTCAT
GCCTTGCAGC TGCTACTTCT CAACGCCAAC AAAATAAACT GCATCCGAGC TGACACCTTC
CAGGACTTAC AAAACCTGTC CCTCCTGTCA CTTTATGACA ACAAGATTCA GAGTTTGGCG
AAAGGCACCT TTGCAGCTCT ACGTGCTATC CAGACTCTAC ACTTGGCGCA GAATCCTTTT
ATCTGTGACT GCAATTTGAA GTGGCTGGCA GACTTTCTGA GAACAAACCC CATTGAGACG
AGTGGAGCCC GATGTGCAAG CCCCCGGCGA CTCGCCAACA AGCGCATTGG GCAGATTAAA
AGCAAAAAGT TCCGATGTTC AGCCAAGGAA CAATATTTTA TTCCAGGGAC AGAGGATTAT
CAGTTGAACA GTGAATGTAA CAGCGATGTG GTGTGTCCCC CCAAGTGCCG ATGTGAATCC
AACGTGGTGG ATTGCTCAAA CCTGAAGCTC ACCAAGATCC CCGACCGTAT TCCCCAATCC
ACGGCAGAGC TGCGCTTGAA CAACAATGAA ATTGCTACCC TTGAGGCCAC TGGTCTATTC
AGGAAACTCC CACACCTCAA GAAAATAAAC CTGAGCAACA ACAAAATTTC TGAAATAGAA
GACGCGGCGT TCGAAGGGGC AGCATCTGTC AGTGAGTTAC ATCTGACGGC CAATCATTTG
GAGTCGGTTC GCAGCGGAAT GTTCCGGGGC CTGGAAGGAC TGAGGACGCT AATGCTACGG
AATAACCGGG TCAGTTGTGT CCATAATGAC AGCTTTACCG GCCTGAGGAA CGTTCGGCTT
CTCTCTCTAT ATGATAACCA GATAAGCACC ATCACCCCAG GAGCATTCGA CACTTTGCAG
TCACTTTCTA CTCTGAACTT GCTGGCTAAC CCATTTAACT GCAACTGCCA ACTGGCTTGG
CTCGGGGACT GGCTGAGGAA GAGGAAGATA GTAACTGGAA ATCCACGTTG CCAAAACCCA
GACTTCCTGA GACAGATCCC TCTGCAGGAT GTGGCCTTTC CGGATTTCAG ATGTGAAGAT
GGTCAGGAAG AGCTGAGTTG TGCGCCCCAA CCTCAGTGCC CCCAAGAATG CACCTGCCTG
GACACTGTTG TACGCTGCAG CAACAAGCAC CTCTTATCAT TGCCCAAGGG AATTCCAAAG
AATGTCACAG AGCTTTACCT GGATGGTAAT CAGTTTACTA TGGTACCCGG ACAGCTCTCC
AGTTTCAAAT ATCTGCAGCT GGTGGATCTA AGCAACAACA AAATCAGTTC CCTGAGTAAC
TCCTCCTTTA CCAACATGAG CCAACTCACC ACACTGATCC TAAGCTATAA TTCCTTGCAG
TGTATACCTC CTTTGGCTTT TGAGGGTCTT CGGTCCTTAA GATTGCTGTC TGTCCATGGG
AATGATATCT CCAGCCTTCC AGAAGGGATC TTTTCTGATG TCACCTCTCT TTCCCATCTA
GCTATTGGTG CCAACCCACT ATATTGTGAT TGTAACTTAC GCTGGCTGTC AAACTGGGTG
AAAACCGGTT ACAAGGAGCC TGGTATCGCC CGCTGTACTG GACCTCCGGA AATGGATGGC
AAGCTGCTTC TTACAACTCC CGCCAAAAAG TTTGAATGCA ATGGGCCTCC AAGCTTGAAT
ATTCTGGCCA AATGCAACCC CTGTCTCTCA GATCCTTGTA AAAACCAAGG TACCTGTCAA
GATGACGCTG TGCAGTACTA CAAGTGCGTT TGTCCTGCTG GCTTCAAGGG CAAAAATTGT
GAAATCTCCC TGAACGCGTG TTCCAGTAAC CCCTGCGAGA ATCAGGGACT GTGTCTTTCC
AAAGAAGAAG GAAGTGGATT TATGTGCACG TGTGCAGATG GATTCGAGGG CCCAACGTGT
GCTGTCAATA AAGATGACTG CAAATACAGT GACTGTGAAA ATGGTGGTAC CTGTTTAGAT
GGAATAAATA ACTACACCTG CTTGTGCCCC TCACAATACA CAGGTGAATA TTGTGAGCAC
CTTGTGGACA TTTGCTCAAC AGACTTGAAT CCTTGTCATA GTGACTCCAA ATGCACCGTG
ACACCCGAGG GCCCAAAGTG TGAGTGTGCC CCGGGCTATG GAGGAGATGA CTGCAGCCTG
AATTACGATG ACTGCAAGGA CCACCGCTGT CAGAATAATG CCCTGTGCGT GGATGAGGTC
AATGGATATT CTTGTCTCTG CACTGAGGGT TACAGCGGGC AGCTTTGTGA AATGCCATCC
CAAGCCCCTT CTCCATGTAA ACTAACACCA TGCCAGAATG GTGCCAACTG TATTGAGGTG
GGGAACAGCG CAGTGTGCCA GTGTCTCCCA GGCTTCGGAG GATCAAAGTG TGAGAAACTG
CTGAGCGTAA ACTTTGTGGA TAGAGATACG TATTTGCAAT TTACCGACCT GCAGAACTGG
CCCCGGGCAA ACATCACACT TCAGGTGTCA ACAGCGGAAG ACAATGGAAT TCTACTGTAC
AATGGAGACC ACGACCATAT GGCAGTAGAG TTATATCAAG GCCACGTCAG GGTCAGTTAT
GACCCCGGAA GCTTTCCCAG CTCTGCAATT TACAGTGCAG AGACCATCAA TGATGGGCAG
TTCCATACCG TGGAGTTGGT TACATTTGAC CAGATGGTTA ATCTGTCCAT TGACGGAGGG
GCGCCCATGA CAATGGATAA GTTTGGGAAA CATTATACCC TTAATAGTGA AGCACCTCTA
TATGTGGGAG GTATGCCCGT CGATGTCAAC TCTGCCGCTT TTAGACTCTG GCAAATCCTT
AATGGAACCA GTTTTCATGG CTGCATCCGG AACCTGTATA TCAATAACGA GCTGCAGGAT
TTTACCAAAA CCCAAATGAA GCCCGGAGTT GTGCCAGGCT GTGAACCATG TCGAAAACTC
TTTTGCCTTC ATGGAATATG TCAGCCCAAT GCAGCAAATG GACCAGTATG CCACTGTGAG
ACTGGGTGGG CTGGGCCACA CTGCGACCAA CAGCTAAATG ATCCCTGTCA AGGTCACAAA
TGTGTCCATG GAGCTTGCAT GCCATTGGAC GCTCTAACGT ACAGCTGCCT GTGCCAGGAT
GGGTACAAAG GTGCCCTATG CAACCAGCAA GGAGAGCTCT ACAATCCATG TAAAACTCTG
CAGTGCCAGC ACGGGCGCTG TCAGATCTCC GACCTGGGCG AAGCCTATTG CGAGTGCGAG
AGCGGCTATG TGGGAGACAA TTGCGATCAA GAATCGGAAT GCCGAGGGGA GCCCGTGCGG
GATTATTACC AAGTACAGCG AGGCTATGCC ATTTGCCAAA CCACACGCAC CGTGTCCTGG
GTGGAATGCC GTGGTTCCTG CCACAATCAG GGCTGCTGCA CTGGATTACG CATGAAGCGC
CGGAAGTACA CTTTCGAGTG CAGCGACGGA TCCTCCTTTG TGGAAGATGT AGAGAAACCC
ATTAAATGTG GGTGTGCTCA GTGTGTGTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID |
OXa29866 |
| Clone ID Related Accession (Same CDS sequence) |
XM_012965817.2
|
| Accession Version |
XM_012965817.2 Latest version! |
Documents for ORF clone product in default vector |
| Sequence Information |
ORF Nucleotide Sequence (Length: 4521bp)
Protein sequence
SNP |
| Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
| Clone information |
Clone Map |
MSDS |
| Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
| ORF Insert Method |
CloneEZ™ Seamless cloning technology |
| Insert Structure |
linear |
| Update Date |
2016-09-07 |
| Organism |
Xenopus tropicalis(tropical clawed frog) |
| Product |
slit homolog 1 protein isoform X1 |
| Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030683.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Sep 8, 2016 this sequence version replaced XM_012965817.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Xenopus tropicalis Annotation Release 103
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
| ATGGATGCCA AGGGCTCTCC TACCTTCCCA TTGTGGCTCC GAGCTGGAGT ATGGATACTG
GCATGGAGCT GGATCTGCCA AGTGTGTGCC AATGGCTGCC CGGCATTGTG TACCTGCAGT
GGCACCACAG TGGATTGTCA TGGCTTGGCA CTAAAGGGGG TCCCCAAGAA CATCCCCAGG
AGCACGGAGA GGCTGGAGCT GTATGGGAAC AACATTACAC GGATCAATAA GAACGACTTC
TCTGGACTTA AGCAACTGAG AGTTTTGCAA CTAATGGAAA ATCAGATTAG CAATGTTGAA
CGTGGAGCTT TTGACGACAT GAAGGAACTC GAGAGACTGC GCCTGAACCG TAACCAGCTG
CACACATTGC CGGAACTTCT CTTCCAGAAT AACCAGGCCC TGTCCAGACT AGATCTGAGT
GAGAATTTAA TCCAAGCCAT TCCGAGGAAA ACATTTAGAG GAGCTACGGA ACTCAAGAAC
CTCCAACTGG ATAAGAACCA GATCAGCTGC ATTGAAGATG GAGCTTTCCG GGCTCTAAGA
GGACTGGAGG TTTTAACTCT GAATAACAAC AACATAACCG CAATTCCTGT TTCCAGTTTC
AACCATATGC CCAAACTGAG GACATTCCGT CTGCATTCTA ACAACTTGTT TTGTGACTGC
CATTTGGCCT GGCTCTCCCA GTGGCTACGC CAGCGGCCAA CCATTGGACT TTTCACACAG
TGCACTGGAC CGTCTCCACT TCGAGGCCTC AACGTGGCAG AGATCCAGAA GCACGAGTTC
AGCTGCTCAG GTCAGTCTGA TCCCCCTAGT TCCCAGATCT GCAGCCTCTC CATTGGGTCC
TGTCCAGCTA TGTGCACCTG CAGCAATGGC ATTGTAGACT GTCGGGGGAA AGGCCTCACA
GCAATACCTG CAAATCTCCC CGAAACCATG ACAGAAATAC GCTTGGAGCT CAATGGTATC
AAATCTGTTC CACCTGGTGC CTTCTCACCC TATAAGAAGC TGCGCAGAAT AGACCTGAGC
AACAACCAAA TCTCAGAGAT CGCCCCCGAC GCTTTCCAGG GTCTCCGCTC GCTTAATTCC
CTGGTTTTAT ATGGCAACAA AATTACAGAC CTTCCCAAAG GTGTGTTTAG TGGTCTTCAT
GCCTTGCAGC TGCTACTTCT CAACGCCAAC AAAATAAACT GCATCCGAGC TGACACCTTC
CAGGACTTAC AAAACCTGTC CCTCCTGTCA CTTTATGACA ACAAGATTCA GAGTTTGGCG
AAAGGCACCT TTGCAGCTCT ACGTGCTATC CAGACTCTAC ACTTGGCGCA GAATCCTTTT
ATCTGTGACT GCAATTTGAA GTGGCTGGCA GACTTTCTGA GAACAAACCC CATTGAGACA
AGTGGAGCCC GATGTGCAAG CCCCCGGCGA CTCGCCAACA AGCGCATTGG GCAGATTAAA
AGCAAAAAGT TCCGATGTTC AGCCAAGGAA CAATATTTTA TTCCAGGGAC AGAGGATTAT
CAGTTGAACA GTGAATGTAA CAGCGATGTG GTGTGTCCCC CCAAGTGCCG ATGTGAATCC
AACGTGGTGG ATTGCTCAAA CCTGAAGCTC ACCAAGATCC CCGACCGTAT TCCCCAATCC
ACGGCAGAGC TGCGCTTGAA CAACAATGAA ATTGCTACCC TTGAGGCCAC TGGTCTATTC
AGGAAACTCC CACACCTCAA GAAAATAAAC CTGAGCAACA ACAAAATTTC TGAAATAGAA
GACGCGGCGT TCGAAGGGGC AGCATCTGTC AGTGAGTTAC ATCTGACGGC CAATCATTTG
GAGTCGGTTC GCAGCGGAAT GTTCCGGGGC CTGGAAGGAC TGAGGACGCT AATGCTACGG
AATAACCGGG TCAGTTGTGT CCATAATGAC AGCTTTACCG GCCTGAGGAA CGTTCGGCTT
CTCTCTCTAT ATGATAACCA GATAAGCACC ATCACCCCAG GAGCATTCGA CACTTTGCAG
TCACTTTCTA CTCTGAACTT GCTGGCTAAC CCATTTAACT GCAACTGCCA ACTGGCTTGG
CTCGGGGACT GGCTGAGGAA GAGGAAGATA GTAACTGGAA ATCCACGTTG CCAAAACCCA
GACTTCCTGA GACAGATCCC TCTGCAGGAT GTGGCCTTTC CGGATTTCAG ATGTGAAGAT
GGTCAGGAAG AGCTGAGTTG TGCGCCCCAA CCTCAGTGCC CCCAAGAATG CACCTGCCTG
GACACTGTTG TACGCTGCAG CAACAAGCAC CTCTTATCAT TGCCCAAGGG AATTCCAAAG
AATGTCACAG AGCTGGATCT AAGCAACAAC AAAATCAGTT CCCTGAGTAA CTCCTCCTTT
ACCAACATGA GCCAACTCAC CACACTGATC CTAAGCTATA ATTCCTTGCA GTGTATACCT
CCTTTGGCTT TTGAGGGTCT TCGGTCCTTA AGATTGCTGT CTGTCCATGG GAATGATATC
TCCAGCCTTC CAGAAGGGAT CTTTTCTGAT GTCACCTCTC TTTCCCATCT AGCTATTGGT
GCCAACCCAC TATATTGTGA TTGTAACTTA CGCTGGCTGT CAAACTGGGT GAAAACCGGT
TACAAGGAGC CTGGCATCGC CCGCTGTACT GGACCTCCGG AAATGGATGG CAAGCTGCTT
CTTACAACTC CCGCCAAAAA GTTTGAATGC AATGGGCCTC CAAGCTTGAA TATTCTGGCC
AAATGCAACC CCTGTCTCTC AGATCCTTGT AAAAACCAAG GTACCTGTCA AGATGACGCT
GTGCAGTACT ACAAGTGCGT TTGTCCTGCT GGCTTCAAGG GCAAAAATTG TGAAATCTCC
CTGAACGCGT GTTCCAGTAA CCCCTGCGAG AATCAGGGAC TGTGTCTTTC CAAAGAAGAA
GGAAGTGGAT TTATGTGCAC GTGTGCAGAT GGATTCGAGG GCCCAACGTG TGCTGTCAAT
AAAGATGACT GCAAATACAG TGACTGTGAA AATGGTGGTA CCTGTTTAGA TGGAATAAAT
AACTACACCT GCTTGTGCCC CTCACAATAC ACAGGTGAAT ATTGTGAGCA CCTTGTGGAC
ATTTGCTCAA CAGACTTGAA TCCTTGTCAT AGTGACTCCA AATGCACCGT GACACCCGAG
GGCCCAAAGT GTGAGTGTGC CCCGGGCTAT GGAGGAGATG ACTGCAGCCT GAATTACGAT
GACTGCAAGG ACCACCGCTG TCAGAATAAT GCCCTGTGCG TGGATGAGGT CAATGGATAT
TCTTGTCTCT GCACTGAGGG TTACAGCGGG CAGCTTTGTG AAATGCCATC CCAAGCCCCT
TCTCCATGTA AACTAACACC ATGCCAGAAT GGTGCCAACT GTATTGAGGT GGGGAACAGC
GCAGTGTGCC AGTGTCTCCC AGGCTTCGGA GGATCAAAGT GTGAGAAACT GCTGAGCGTA
AACTTTGTGG ATAGAGATAC GTATTTGCAA TTTACCGACC TGCAGAACTG GCCCCGGGCA
AACATCACAC TTCAGGTGTC AACAGCGGAA GACAATGGAA TTCTACTGTA CAATGGAGAC
CACGACCATA TGGCAGTAGA GTTATATCAA GGCCACGTCA GGGTCAGTTA TGACCCCGGA
AGCTTTCCCA GCTCTGCAAT TTACAGTGCA GAGACCATCA ATGATGGGCA GTTCCATACC
GTGGAGTTGG TTACATTTGA CCAGATGGTT AATCTGTCCA TTGACGGAGG GGCGCCCATG
ACAATGGATA AGTTTGGGAA ACATTATACC CTTAATAGTG AAGCACCTCT ATATGTGGGA
GGTATGCCCG TCGATGTCAA CTCTGCCGCT TTTAGACTCT GGCAAATCCT TAATGGAACC
AGTTTTCATG GCTGCATCCG GAACCTGTAT ATCAATAACG AGCTGCAGGA TTTTACCAAA
ACCCAAATGA AGCCCGGAGT TGTGCCAGGC TGTGAACCAT GTCGAAAACT CTTTTGCCTT
CATGGAATAT GTCAGCCCAA TGCAGCAAAT GGACCAGTAT GCCACTGTGA GACTGGGTGG
GCTGGGCCAC ACTGCGACCA ACAGCTAAAT GATCCCTGTC AAGGTCACAA ATGTGTCCAT
GGAGCTTGCA TGCCATTGGA CGCTCTAACG TACAGCTGCC TGTGCCAGGA TGGGTACAAA
GGTGCCCTAT GCAACCAGCA AGGAGAGCTC TACAATCCAT GTAAAACTCT GCAGTGCCAG
CACGGGCGCT GTCAGATCTC CGACCTGGGC GAAGCCTATT GCGAGTGCGA GAGCGGCTAT
GTGGGAGACA ATTGCGATCA AGAATCGGAA TGCCGAGGGG AGCCGGTGCG GGATTATTAC
CAAGTACAGC GAGGCTATGC CATTTGCCAA ACCACACGCA CCGTGTCCTG GGTGGAATGC
CGTGGTTCCT GCCACAATCA GGGCTGCTGC ACTGGATTAC GCATGAAGCG CCGGAAGTAC
ACTTTCGAGT GCAGCGACGG ATCCTCCTTT GTGGAAGATG TAGAGAAACC CATTAAATGT
GGGTGTGCTC AGTGTGTGTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq |
XP_012821271.1 |
| CDS | 639..5159 |
| Translation | |
Target ORF information:
| RefSeq Version | XM_012965817.2 |
| Organism | Xenopus tropicalis(tropical clawed frog) |
| Definition | Xenopus tropicalis slit guidance ligand 1 (slit1), transcript variant X1, mRNA. |
Target ORF information:
| Epitope | DYKDDDDK |
| Bacterial selection | AMPR |
| Mammalian selection | NeoR |
| Vector | pcDNA3.1+/C-(K)DYK |
|
XM_012965817.2 |
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
| ATGGATGCCA AGGGCTCTCC TACCTTCCCA TTGTGGCTCC GAGCTGGAGT ATGGATACTG
GCATGGAGCT GGATCTGCCA AGTGTGTGCC AATGGCTGCC CGGCATTGTG TACCTGCAGT
GGCACCACAG TGGATTGTCA TGGCTTGGCA CTAAAGGGGG TCCCCAAGAA CATCCCCAGG
AGCACGGAGA GGCTGGAGCT GTATGGGAAC AACATTACAC GGATCAATAA GAACGACTTC
TCTGGACTTA AGCAACTGAG AGTTTTGCAA CTAATGGAAA ATCAGATTAG CAATGTTGAA
CGTGGAGCTT TTGACGACAT GAAGGAACTC GAGAGACTGC GCCTGAACCG TAACCAGCTG
CACACATTGC CGGAACTTCT CTTCCAGAAT AACCAGGCCC TGTCCAGACT AGATCTGAGT
GAGAATTTAA TCCAAGCCAT TCCGAGGAAA ACATTTAGAG GAGCTACGGA ACTCAAGAAC
CTCCAACTGG ATAAGAACCA GATCAGCTGC ATTGAAGATG GAGCTTTCCG GGCTCTAAGA
GGACTGGAGG TTTTAACTCT GAATAACAAC AACATAACCG CAATTCCTGT TTCCAGTTTC
AACCATATGC CCAAACTGAG GACATTCCGT CTGCATTCTA ACAACTTGTT TTGTGACTGC
CATTTGGCCT GGCTCTCCCA GTGGCTACGC CAGCGGCCAA CCATTGGACT TTTCACACAG
TGCACTGGAC CGTCTCCACT TCGAGGCCTC AACGTGGCAG AGATCCAGAA GCACGAGTTC
AGCTGCTCAG GTCAGTCTGA TCCCCCTAGT TCCCAGATCT GCAGCCTCTC CATTGGGTCC
TGTCCAGCTA TGTGCACCTG CAGCAATGGC ATTGTAGACT GTCGGGGGAA AGGCCTCACA
GCAATACCTG CAAATCTCCC CGAAACCATG ACAGAAATAC GCTTGGAGCT CAATGGTATC
AAATCTGTTC CACCTGGTGC CTTCTCACCC TATAAGAAGC TGCGCAGAAT AGACCTGAGC
AACAACCAAA TCTCAGAGAT CGCCCCCGAC GCTTTCCAGG GTCTCCGCTC GCTTAATTCC
CTGGTTTTAT ATGGCAACAA AATTACAGAC CTTCCCAAAG GTGTGTTTAG TGGTCTTCAT
GCCTTGCAGC TGCTACTTCT CAACGCCAAC AAAATAAACT GCATCCGAGC TGACACCTTC
CAGGACTTAC AAAACCTGTC CCTCCTGTCA CTTTATGACA ACAAGATTCA GAGTTTGGCG
AAAGGCACCT TTGCAGCTCT ACGTGCTATC CAGACTCTAC ACTTGGCGCA GAATCCTTTT
ATCTGTGACT GCAATTTGAA GTGGCTGGCA GACTTTCTGA GAACAAACCC CATTGAGACA
AGTGGAGCCC GATGTGCAAG CCCCCGGCGA CTCGCCAACA AGCGCATTGG GCAGATTAAA
AGCAAAAAGT TCCGATGTTC AGCCAAGGAA CAATATTTTA TTCCAGGGAC AGAGGATTAT
CAGTTGAACA GTGAATGTAA CAGCGATGTG GTGTGTCCCC CCAAGTGCCG ATGTGAATCC
AACGTGGTGG ATTGCTCAAA CCTGAAGCTC ACCAAGATCC CCGACCGTAT TCCCCAATCC
ACGGCAGAGC TGCGCTTGAA CAACAATGAA ATTGCTACCC TTGAGGCCAC TGGTCTATTC
AGGAAACTCC CACACCTCAA GAAAATAAAC CTGAGCAACA ACAAAATTTC TGAAATAGAA
GACGCGGCGT TCGAAGGGGC AGCATCTGTC AGTGAGTTAC ATCTGACGGC CAATCATTTG
GAGTCGGTTC GCAGCGGAAT GTTCCGGGGC CTGGAAGGAC TGAGGACGCT AATGCTACGG
AATAACCGGG TCAGTTGTGT CCATAATGAC AGCTTTACCG GCCTGAGGAA CGTTCGGCTT
CTCTCTCTAT ATGATAACCA GATAAGCACC ATCACCCCAG GAGCATTCGA CACTTTGCAG
TCACTTTCTA CTCTGAACTT GCTGGCTAAC CCATTTAACT GCAACTGCCA ACTGGCTTGG
CTCGGGGACT GGCTGAGGAA GAGGAAGATA GTAACTGGAA ATCCACGTTG CCAAAACCCA
GACTTCCTGA GACAGATCCC TCTGCAGGAT GTGGCCTTTC CGGATTTCAG ATGTGAAGAT
GGTCAGGAAG AGCTGAGTTG TGCGCCCCAA CCTCAGTGCC CCCAAGAATG CACCTGCCTG
GACACTGTTG TACGCTGCAG CAACAAGCAC CTCTTATCAT TGCCCAAGGG AATTCCAAAG
AATGTCACAG AGCTGGATCT AAGCAACAAC AAAATCAGTT CCCTGAGTAA CTCCTCCTTT
ACCAACATGA GCCAACTCAC CACACTGATC CTAAGCTATA ATTCCTTGCA GTGTATACCT
CCTTTGGCTT TTGAGGGTCT TCGGTCCTTA AGATTGCTGT CTGTCCATGG GAATGATATC
TCCAGCCTTC CAGAAGGGAT CTTTTCTGAT GTCACCTCTC TTTCCCATCT AGCTATTGGT
GCCAACCCAC TATATTGTGA TTGTAACTTA CGCTGGCTGT CAAACTGGGT GAAAACCGGT
TACAAGGAGC CTGGCATCGC CCGCTGTACT GGACCTCCGG AAATGGATGG CAAGCTGCTT
CTTACAACTC CCGCCAAAAA GTTTGAATGC AATGGGCCTC CAAGCTTGAA TATTCTGGCC
AAATGCAACC CCTGTCTCTC AGATCCTTGT AAAAACCAAG GTACCTGTCA AGATGACGCT
GTGCAGTACT ACAAGTGCGT TTGTCCTGCT GGCTTCAAGG GCAAAAATTG TGAAATCTCC
CTGAACGCGT GTTCCAGTAA CCCCTGCGAG AATCAGGGAC TGTGTCTTTC CAAAGAAGAA
GGAAGTGGAT TTATGTGCAC GTGTGCAGAT GGATTCGAGG GCCCAACGTG TGCTGTCAAT
AAAGATGACT GCAAATACAG TGACTGTGAA AATGGTGGTA CCTGTTTAGA TGGAATAAAT
AACTACACCT GCTTGTGCCC CTCACAATAC ACAGGTGAAT ATTGTGAGCA CCTTGTGGAC
ATTTGCTCAA CAGACTTGAA TCCTTGTCAT AGTGACTCCA AATGCACCGT GACACCCGAG
GGCCCAAAGT GTGAGTGTGC CCCGGGCTAT GGAGGAGATG ACTGCAGCCT GAATTACGAT
GACTGCAAGG ACCACCGCTG TCAGAATAAT GCCCTGTGCG TGGATGAGGT CAATGGATAT
TCTTGTCTCT GCACTGAGGG TTACAGCGGG CAGCTTTGTG AAATGCCATC CCAAGCCCCT
TCTCCATGTA AACTAACACC ATGCCAGAAT GGTGCCAACT GTATTGAGGT GGGGAACAGC
GCAGTGTGCC AGTGTCTCCC AGGCTTCGGA GGATCAAAGT GTGAGAAACT GCTGAGCGTA
AACTTTGTGG ATAGAGATAC GTATTTGCAA TTTACCGACC TGCAGAACTG GCCCCGGGCA
AACATCACAC TTCAGGTGTC AACAGCGGAA GACAATGGAA TTCTACTGTA CAATGGAGAC
CACGACCATA TGGCAGTAGA GTTATATCAA GGCCACGTCA GGGTCAGTTA TGACCCCGGA
AGCTTTCCCA GCTCTGCAAT TTACAGTGCA GAGACCATCA ATGATGGGCA GTTCCATACC
GTGGAGTTGG TTACATTTGA CCAGATGGTT AATCTGTCCA TTGACGGAGG GGCGCCCATG
ACAATGGATA AGTTTGGGAA ACATTATACC CTTAATAGTG AAGCACCTCT ATATGTGGGA
GGTATGCCCG TCGATGTCAA CTCTGCCGCT TTTAGACTCT GGCAAATCCT TAATGGAACC
AGTTTTCATG GCTGCATCCG GAACCTGTAT ATCAATAACG AGCTGCAGGA TTTTACCAAA
ACCCAAATGA AGCCCGGAGT TGTGCCAGGC TGTGAACCAT GTCGAAAACT CTTTTGCCTT
CATGGAATAT GTCAGCCCAA TGCAGCAAAT GGACCAGTAT GCCACTGTGA GACTGGGTGG
GCTGGGCCAC ACTGCGACCA ACAGCTAAAT GATCCCTGTC AAGGTCACAA ATGTGTCCAT
GGAGCTTGCA TGCCATTGGA CGCTCTAACG TACAGCTGCC TGTGCCAGGA TGGGTACAAA
GGTGCCCTAT GCAACCAGCA AGGAGAGCTC TACAATCCAT GTAAAACTCT GCAGTGCCAG
CACGGGCGCT GTCAGATCTC CGACCTGGGC GAAGCCTATT GCGAGTGCGA GAGCGGCTAT
GTGGGAGACA ATTGCGATCA AGAATCGGAA TGCCGAGGGG AGCCGGTGCG GGATTATTAC
CAAGTACAGC GAGGCTATGC CATTTGCCAA ACCACACGCA CCGTGTCCTG GGTGGAATGC
CGTGGTTCCT GCCACAATCA GGGCTGCTGC ACTGGATTAC GCATGAAGCG CCGGAAGTAC
ACTTTCGAGT GCAGCGACGG ATCCTCCTTT GTGGAAGATG TAGAGAAACC CATTAAATGT
GGGTGTGCTC AGTGTGTGTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
