Gene Symbol | pcdh7 |
Entrez Gene ID | 100124985 |
Full Name | protocadherin 7 |
Synonyms | bh-pcdh,bhpcdh,nfpc |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » pcdh7 cDNA ORF clone
gRNAs
Gene Symbol | pcdh7 |
Entrez Gene ID | 100124985 |
Full Name | protocadherin 7 |
Synonyms | bh-pcdh,bhpcdh,nfpc |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_012965366.2 | XP_012820820.1 | protocadherin-7 isoform X2 |
XM_018093920.2 | XP_017949409.1 | protocadherin-7 isoform X1 |
XM_018093920.1 | XP_017949409.1 | protocadherin-7 isoform X1 |
XM_031901728.1 | XP_031757588.1 | protocadherin-7 isoform X2 |
XM_012965366.3 | XP_012820820.1 | protocadherin-7 isoform X3 |
NM_001134820.3 | NP_001128292.2 | protocadherin-7 precursor |
Homo sapiens (human) | PCDH7 | NP_001166994.1 |
Bos taurus (cattle) | PCDH7 | NP_001179904.1 |
Gallus gallus (chicken) | PCDH7 | XP_420748.3 |
Danio rerio (zebrafish) | pcdh7b | XP_683121.5 |
Xenopus tropicalis (tropical clawed frog) | pcdh7 | NP_001128292.2 |
Mus musculus (house mouse) | Pcdh7 | NP_001116230.1 |
Rattus norvegicus (Norway rat) | Pcdh7 | NP_001004087.1 |
Pan troglodytes (chimpanzee) | PCDH7 | XP_003310324.1 |
Canis lupus familiaris (dog) | PCDH7 | XP_545961.3 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following pcdh7 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pcdh7 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa41641 | |
Clone ID Related Accession (Same CDS sequence) | XM_018093920.1 | |
Accession Version | XM_018093920.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protocadherin-7 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017949409.1 |
CDS | 703..4383 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa47428 | |
Clone ID Related Accession (Same CDS sequence) | XM_018093920.2 | |
Accession Version | XM_018093920.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protocadherin-7 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_018093920.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017949409.1 |
CDS | 688..4368 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa47429 | |
Clone ID Related Accession (Same CDS sequence) | XM_031901728.1 | |
Accession Version | XM_031901728.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protocadherin-7 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_031757588.1 |
CDS | 688..4344 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa47430 | |
Clone ID Related Accession (Same CDS sequence) | XM_012965366.3 | |
Accession Version | XM_012965366.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3105bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protocadherin-7 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012965366.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012820820.1 |
CDS | 683..3787 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa20406 | |
Clone ID Related Accession (Same CDS sequence) | NM_001134820.3 | |
Accession Version | NM_001134820.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3129bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-06 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protocadherin-7 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AAMC03001088.1. On Aug 8, 2013 this sequence version replaced NM_001134820.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC168528.1, CX812225.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1025683, SAMEA1025686 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001128292.2 |
CDS | 515..3643 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa30566 | |
Clone ID Related Accession (Same CDS sequence) | XM_012965366.2 | |
Accession Version | XM_012965366.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3105bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protocadherin-7 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012965366.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012820820.1 |
CDS | 697..3801 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGACTG AGGGGGTACC GAGTTGCTGG AGCTCCTGGC TGCTCCTGCT GCAGATTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |