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borcs5 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol borcs5
Entrez Gene ID 100127605
Full Name BLOC-1 related complex subunit 5
Synonyms loh12cr1
General protein information
Preferred Names

BLOC-1 related complex subunit 5

Names

BLOC-1-related complex subunit 5
loss of heterozygosity 12 chromosomal region 1 protein homolog
Loss of heterozygosity 12 chromosomal region 1 protein homolog
loss of heterozygosity, 12, chromosomal region 1
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012958496.2 XP_012813950.1 loss of heterozygosity 12 chromosomal region 1 protein homolog isoform X1
NM_001112962.1 NP_001106433.1 BLOC-1-related complex subunit 5

Pathways from BioSystems


Homologies


Homo sapiens (human) LOH12CR1 NP_477517.1
Mus musculus (house mouse) Loh12cr1 NP_080647.2
LOH12CR1 XP_001084966.1
Bos taurus (cattle) LOH12CR1 NP_001069823.1
Gallus gallus (chicken) LOH12CR1 NP_001026528.1
Canis lupus familiaris (dog) LOH12CR1 XP_005637192.1
Drosophila melanogaster (fruit fly) CG11802 NP_572759.1
Pan troglodytes (chimpanzee) LOH12CR1 XP_001139139.2
Rattus norvegicus (Norway rat) Loh12cr1 NP_001102120.1
Danio rerio (zebrafish) loh12cr1 NP_001007053.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP009657 XP_001689139.1
Xenopus tropicalis (tropical clawed frog) loh12cr1 NP_001106433.1

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following borcs5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the borcs5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa21392 NM_001112962.1
Latest version!		 Xenopus tropicalis BLOC-1 related complex subunit 5 (borcs5), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
OXa30915 XM_012958496.2
Latest version!		 Xenopus tropicalis BLOC-1 related complex subunit 5 (borcs5), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00

ORF Online Only Promotion

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1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa21392
Clone ID Related Accession (Same CDS sequence) NM_001112962.1
Accession Version NM_001112962.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 591bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-01-20
Organism Xenopus tropicalis(tropical clawed frog)
Product BLOC-1-related complex subunit 5
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC153719.1. ##Evidence-Data-START## Transcript exon combination :: BC153719.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1025687, SAMEA2431823 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGTGCTG AGCAGAGTTC TGAGGGGGAT CTCAGGCAGA ATGATCTCAG CTCCTCTGTT 
TCACCATCTC CTGCCAAGCA GAAAGCAAAG ATGGACGACA TTGTGGTTGT AGCCCCTGGA 
ACCCAGTCCC TCCGTAACGT GAGTAAGGAC CCTGAAGTTA TCAAGTTACA GGAGATACCG 
ACGTTTCAAC CACTTCTAAA AGGTCTCCTG AGCGGTCAGA CATCCCCCAC TAACGTCCGG 
CTCGAGAGAC TGGACTCCCC CCAAGTATTA CAGCTGTGCG TTCGTTACCA GGAGCACCTG 
CACCAGTGCG CAGAGGCCGT GTCCTTCGAC CAGAACGCCC TAGTAAAGAG AATTAAGGAG 
ATGGACTCCT CGGTGGACGG ACTTTACAGC CTCATGCAGG AAAGACAGAA GCGCTTCGCC 
AAGTACGCCG AGCAAATCCA GAAGGTCAAC GAGATGTCTG CCATTCTCCG ACGCATCCAG 
ATGGGCATCG ACCAGACGGT TCCCCTCATG GAGAAGCTAA ACATCATGCT GCCCGAAGGC 
GAGAGACTGG AGCCGTTCTG TATGAGCCCC GACAGGGAGA GCAAACCGTA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001106433.1
CDS138..728
Translation

Target ORF information:

RefSeq Version NM_001112962.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis BLOC-1 related complex subunit 5 (borcs5), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001112962.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGTGCTG AGCAGAGTTC TGAGGGGGAT CTCAGGCAGA ATGATCTCAG CTCCTCTGTT 
TCACCATCTC CTGCCAAGCA GAAAGCAAAG ATGGACGACA TTGTGGTTGT AGCCCCTGGA 
ACCCAGTCCC TCCGTAACGT GAGTAAGGAC CCTGAAGTTA TCAAGTTACA GGAGATACCG 
ACGTTTCAAC CACTTCTAAA AGGTCTCCTG AGCGGTCAGA CATCCCCCAC TAACGTCCGG 
CTCGAGAGAC TGGACTCCCC CCAAGTATTA CAGCTGTGCG TTCGTTACCA GGAGCACCTG 
CACCAGTGCG CAGAGGCCGT GTCCTTCGAC CAGAACGCCC TAGTAAAGAG AATTAAGGAG 
ATGGACTCCT CGGTGGACGG ACTTTACAGC CTCATGCAGG AAAGACAGAA GCGCTTCGCC 
AAGTACGCCG AGCAAATCCA GAAGGTCAAC GAGATGTCTG CCATTCTCCG ACGCATCCAG 
ATGGGCATCG ACCAGACGGT TCCCCTCATG GAGAAGCTAA ACATCATGCT GCCCGAAGGC 
GAGAGACTGG AGCCGTTCTG TATGAGCCCC GACAGGGAGA GCAAACCGTA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa30915
Clone ID Related Accession (Same CDS sequence) XM_012958496.2
Accession Version XM_012958496.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 591bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product loss of heterozygosity 12 chromosomal region 1 protein homolog isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016683387.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012958496.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGTGCTG AGCAGAGTTC TGAGGGGGAT CTCAGGCAGA ATGATCTCAG CTCCTCTGTT 
TCACCATCTC CTGCCAAGCA GAAAGCAAAG ATGGACGACA TTGTGGTTGT AGCCCCTGGA 
ACCCAGTCCC TCCGTAACGT GAGTAAGGAC CCTGAAGTTA TCAAGTTACA AGAGATTCCG 
ACATTTCAAC CACTTCTAAA AGGTCTCCTG AGTGGTCAGA CATCCCCCAC TAACGTCCGG 
CTCGAGAGAC TGGACTCCCC CCAAGTATTA CAGCTGTGCG TGCGTTACCA GGAACACCTG 
CACCAGTGCG CAGAGGCCGT GTCCTTCGAC CAGAACGCCC TAGTAAAGAG AATTAAGGAG 
ATGGACTCCT CGGTGGACGG ACTTTACAGC CTCATGCAGG AAAGACAGAA GCGCTTCGCC 
AAGTACGCCG AGCAAATCCA GAAGGTCAAC GAGATGTCTG CCATTCTCCG ACGCATCCAG 
ATGGGCATCG ACCAGACGGT TCCCCTCATG GAGAAACTAA ACATCATGCT GCCCGAAGGC 
GAGAGACTGG AGCCGTTCTG TATGAGCCCC GACAGGGAGA GCAAACCGTA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012813950.1
CDS400..990
Translation

Target ORF information:

RefSeq Version XM_012958496.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis BLOC-1 related complex subunit 5 (borcs5), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012958496.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGTGCTG AGCAGAGTTC TGAGGGGGAT CTCAGGCAGA ATGATCTCAG CTCCTCTGTT 
TCACCATCTC CTGCCAAGCA GAAAGCAAAG ATGGACGACA TTGTGGTTGT AGCCCCTGGA 
ACCCAGTCCC TCCGTAACGT GAGTAAGGAC CCTGAAGTTA TCAAGTTACA AGAGATTCCG 
ACATTTCAAC CACTTCTAAA AGGTCTCCTG AGTGGTCAGA CATCCCCCAC TAACGTCCGG 
CTCGAGAGAC TGGACTCCCC CCAAGTATTA CAGCTGTGCG TGCGTTACCA GGAACACCTG 
CACCAGTGCG CAGAGGCCGT GTCCTTCGAC CAGAACGCCC TAGTAAAGAG AATTAAGGAG 
ATGGACTCCT CGGTGGACGG ACTTTACAGC CTCATGCAGG AAAGACAGAA GCGCTTCGCC 
AAGTACGCCG AGCAAATCCA GAAGGTCAAC GAGATGTCTG CCATTCTCCG ACGCATCCAG 
ATGGGCATCG ACCAGACGGT TCCCCTCATG GAGAAACTAA ACATCATGCT GCCCGAAGGC 
GAGAGACTGG AGCCGTTCTG TATGAGCCCC GACAGGGAGA GCAAACCGTA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P