Gene Symbol | sirt5 |
Entrez Gene ID | 100170199 |
Full Name | sirtuin 5 |
Synonyms | sir2l5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » sirt5 cDNA ORF clone
Gene Symbol | sirt5 |
Entrez Gene ID | 100170199 |
Full Name | sirtuin 5 |
Synonyms | sir2l5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
NM_001276702.1 | NP_001263631.1 | NAD-dependent protein deacylase sirtuin-5, mitochondrial precursor |
NM_001276703.1 | NP_001263632.1 | NAD-dependent protein deacylase sirtuin-5, mitochondrial precursor |
XM_012964359.2 | XP_012819813.1 | NAD-dependent protein deacylase sirtuin-5, mitochondrial isoform X1 |
Gallus gallus (chicken) | SIRT5 | NP_001263293.1 |
Canis lupus familiaris (dog) | SIRT5 | XP_535891.2 |
Eremothecium gossypii | AGOS_ABL004W | NP_982943.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_15048 | XP_003721315.1 |
Xenopus tropicalis (tropical clawed frog) | sirt5 | NP_001263631.1 |
SIRT5 | XP_001091987.1 | |
Mus musculus (house mouse) | Sirt5 | NP_849179.1 |
Rattus norvegicus (Norway rat) | Sirt5 | NP_001004256.1 |
Homo sapiens (human) | SIRT5 | NP_036373.1 |
Pan troglodytes (chimpanzee) | SIRT5 | XP_001169506.1 |
Bos taurus (cattle) | SIRT5 | NP_001029467.1 |
Danio rerio (zebrafish) | sirt5 | NP_001002605.1 |
The genome of the Western clawed frog Xenopus tropicalis.
Hellsten U, Harland RM, Gilchrist MJ, Hendrix D, Jurka J, Kapitonov V, Ovcharenko I, Putnam NH, Shu S, Taher L, Blitz IL, Blumberg B, Dichmann DS, Dubchak I, Amaya E, Detter JC, Fletcher R, Gerhard DS, Goodstein D, Graves T, Grigoriev IV, Grimwood J, Kawashima T, Lindquist E, Lucas SM, Mead PE, Mitros T, Ogino H, Ohta Y, Poliakov AV, Pollet N, Robert J, Salamov A, Sater AK, Schmutz J, Terry A, Vize PD, Warren WC, Wells D, Wills A, Wilson RK, Zimmerman LB, Zorn AM, Grainger R, Grammer T, Khokha MK, Richardson PM, Rokhsar DS
Science (New York, N.Y.)328(5978)633-6(2010 Apr)
Exploring nervous system transcriptomes during embryogenesis and metamorphosis in Xenopus tropicalis using EST analysis.
Fierro AC, Thuret R, Coen L, Perron M, Demeneix BA, Wegnez M, Gyapay G, Weissenbach J, Wincker P, Mazabraud A, Pollet N
BMC genomics8118(2007 May)
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following sirt5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sirt5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa00001 | |
Clone ID Related Accession (Same CDS sequence) | NM_001276702.1 , NM_001276703.1 | |
Accession Version | NM_001276702.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 930bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | NAD-dependent protein deacylase sirtuin-5, mitochondrial precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CN096619.1, DN089721.1, CR585771.1, DT532116.1, DT402089.1 and DR895353.1. On Feb 28, 2013 this sequence version replaced XM_002941369.1. Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein. ##Evidence-Data-START## CDS exon combination :: CU025128.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATTCTTC TTCCGTTCCA CACCAGAAGA CTGGTGAGCC ACGTTTACTG TGGACTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001263631.1 |
CDS | 208..1137 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001276702.1 |
1 | ATGATTCTTC TTCCGTTCCA CACCAGAAGA CTGGTGAGCC ACGTTTACTG TGGACTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa00001 | |
Clone ID Related Accession (Same CDS sequence) | NM_001276702.1 , NM_001276703.1 | |
Accession Version | NM_001276703.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 930bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | NAD-dependent protein deacylase sirtuin-5, mitochondrial precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CN096619.1, CU025128.1, BC121686.1 and DR895353.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: CU025128.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATTCTTC TTCCGTTCCA CACCAGAAGA CTGGTGAGCC ACGTTTACTG TGGACTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001263632.1 |
CDS | 75..1004 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001276703.1 |
1 | ATGATTCTTC TTCCGTTCCA CACCAGAAGA CTGGTGAGCC ACGTTTACTG TGGACTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa32317 | |
Clone ID Related Accession (Same CDS sequence) | XM_012964359.2 | |
Accession Version | XM_012964359.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 876bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | NAD-dependent protein deacylase sirtuin-5, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030682.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012964359.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTCTTC TTCCGTTCCA CACCAGAAGA CTGGTGAGCC ACGTTTACTG TGGACTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012819813.1 |
CDS | 290..1165 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012964359.2 |
1 | ATGATTCTTC TTCCGTTCCA CACCAGAAGA CTGGTGAGCC ACGTTTACTG TGGACTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The genome of the Western clawed frog Xenopus tropicalis. |
Exploring nervous system transcriptomes during embryogenesis and metamorphosis in Xenopus tropicalis using EST analysis. |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |