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exosc5 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol exosc5
Entrez Gene ID 100170617
Full Name exosome component 5
Synonyms hrrp46p,rrp41b,rrp46,rrp46p
General protein information
Preferred Names

exosome component 5

Names

exosome complex component RRP46
exosome complex exonuclease RRP46
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_002939391.4 XP_002939437.3 exosome complex component RRP46
XM_002939391.3 XP_002939437.3 exosome complex component RRP46

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) EXOSC5 XP_001152170.1
EXOSC5 XP_001102687.2
Gallus gallus (chicken) EXOSC5 XP_003643513.1
Oryza sativa (rice) Os03g0854200 NP_001051936.1
Xenopus tropicalis (tropical clawed frog) exosc5 XP_002939437.2
Mus musculus (house mouse) Exosc5 NP_613052.1
Danio rerio (zebrafish) exosc5 NP_001038817.2
Eremothecium gossypii AGOS_AAR035C NP_982576.2
Arabidopsis thaliana (thale cress) AT3G46210 NP_001030818.1
Homo sapiens (human) EXOSC5 NP_064543.3
Canis lupus familiaris (dog) EXOSC5 XP_852838.1
Rattus norvegicus (Norway rat) Exosc5 NP_001100963.2
Drosophila melanogaster (fruit fly) Rrp46 NP_650001.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP002177 XP_308011.5
Caenorhabditis elegans (roundworm) crn-5 NP_496284.1
Bos taurus (cattle) EXOSC5 XP_005219175.1

Gene Ontology

The following exosc5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the exosc5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa32473 XM_002939391.4
Latest version!		 Xenopus tropicalis exosome component 5 (exosc5), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
View Old Accession Versions >>
OXa32473 XM_002939391.3 Xenopus tropicalis exosome component 5 (exosc5), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa32473
Clone ID Related Accession (Same CDS sequence) XM_002939391.4 , XM_002939391.3
Accession Version XM_002939391.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 648bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product exosome complex component RRP46
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 23, 2015 this sequence version replaced XM_002939391.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
ATGGAGGCTG TAGGTTCTGT ATTGCGGGAA TACGGGTGTG AGCAGAGTTT GCTGAGCCGT 
CCCGATGGAT CCGCTACGTT TCTTCAGGGC GACACATCTG TAATGGCTGG AGTATATGGC 
CCTGCAGAGA TCAAGGTCAG CAGAGAAATC CATAATAAAG CCACATTAGA GGTGATCCTC 
AGGCCCAAGA CTGGGTTGCC TGCTATCCAG GAGAAAAACC AGGAGCAGCT AATTCGTGAA 
ACATGTGAAT CTGTCATCAT TGGATCCTTG CATCCTAGAA CCTCAATAAC CATTGTGCTA 
CAGATAGTCA GTGATGCTGG ATCTCTGCTG TCCTGCTGCC TTAATGCAGC TTGCATGGGT 
TTAATGGATG CAGGTCTCCC CATGCGGGCC CTGTTCTGTG GGGTGACATG TGCAATGGAT 
AATGACGGAA CTATAACCCT CGATCCTAAT TTTCGGCAAC AGAAGGAAAG CAGAGCAGTT 
CTAACATTTG CTATTGAAAG CACAGAAAGG AAAGTTCTAA TGATGTCAAA TAGAGGAGTC 
TATTCTGCCA CAGAGCTCCA GCAGTGCATT GCAGCCGCAC AAATCGCATC CGAGAAGCTG 
TTCCAGTTCT ACAGGGACTT CATAAGAAGG AGATATTCTA AATCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_002939437.3
CDS31..678
Translation

Target ORF information:

RefSeq Version XM_002939391.3
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis exosome component 5 (exosc5), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_002939391.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGGAGGCTG TAGGTTCTGT ATTGCGGGAA TACGGGTGTG AGCAGAGTTT GCTGAGCCGT 
CCCGATGGAT CCGCTACGTT TCTTCAGGGC GACACATCTG TAATGGCTGG AGTATATGGC 
CCTGCAGAGA TCAAGGTCAG CAGAGAAATC CATAATAAAG CCACATTAGA GGTGATCCTC 
AGGCCCAAGA CTGGGTTGCC TGCTATCCAG GAGAAAAACC AGGAGCAGCT AATTCGTGAA 
ACATGTGAAT CTGTCATCAT TGGATCCTTG CATCCTAGAA CCTCAATAAC CATTGTGCTA 
CAGATAGTCA GTGATGCTGG ATCTCTGCTG TCCTGCTGCC TTAATGCAGC TTGCATGGGT 
TTAATGGATG CAGGTCTCCC CATGCGGGCC CTGTTCTGTG GGGTGACATG TGCAATGGAT 
AATGACGGAA CTATAACCCT CGATCCTAAT TTTCGGCAAC AGAAGGAAAG CAGAGCAGTT 
CTAACATTTG CTATTGAAAG CACAGAAAGG AAAGTTCTAA TGATGTCAAA TAGAGGAGTC 
TATTCTGCCA CAGAGCTCCA GCAGTGCATT GCAGCCGCAC AAATCGCATC CGAGAAGCTG 
TTCCAGTTCT ACAGGGACTT CATAAGAAGG AGATATTCTA AATCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa32473
Clone ID Related Accession (Same CDS sequence) XM_002939391.4 , XM_002939391.3
Accession Version XM_002939391.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 648bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product exosome complex component RRP46
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_002939391.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
ATGGAGGCTG TAGGTTCTGT ATTGCGGGAA TACGGGTGTG AGCAGAGTTT GCTGAGCCGT 
CCCGATGGAT CCGCTACGTT TCTTCAGGGC GACACATCTG TAATGGCTGG AGTATATGGC 
CCTGCAGAGA TCAAGGTCAG CAGAGAAATC CATAATAAAG CCACATTAGA GGTGATCCTC 
AGGCCCAAGA CTGGGTTGCC TGCTATCCAG GAGAAAAACC AGGAGCAGCT AATTCGTGAA 
ACATGTGAAT CTGTCATCAT TGGATCCTTG CATCCTAGAA CCTCAATAAC CATTGTGCTA 
CAGATAGTCA GTGATGCTGG ATCTCTGCTG TCCTGCTGCC TTAATGCAGC TTGCATGGGT 
TTAATGGATG CAGGTCTCCC CATGCGGGCC CTGTTCTGTG GGGTGACATG TGCAATGGAT 
AATGACGGAA CTATAACCCT CGATCCTAAT TTTCGGCAAC AGAAGGAAAG CAGAGCAGTT 
CTAACATTTG CTATTGAAAG CACAGAAAGG AAAGTTCTAA TGATGTCAAA TAGAGGAGTC 
TATTCTGCCA CAGAGCTCCA GCAGTGCATT GCAGCCGCAC AAATCGCATC CGAGAAGCTG 
TTCCAGTTCT ACAGGGACTT CATAAGAAGG AGATATTCTA AATCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_002939437.3
CDS31..678
Translation

Target ORF information:

RefSeq Version XM_002939391.4
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis exosome component 5 (exosc5), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_002939391.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGGAGGCTG TAGGTTCTGT ATTGCGGGAA TACGGGTGTG AGCAGAGTTT GCTGAGCCGT 
CCCGATGGAT CCGCTACGTT TCTTCAGGGC GACACATCTG TAATGGCTGG AGTATATGGC 
CCTGCAGAGA TCAAGGTCAG CAGAGAAATC CATAATAAAG CCACATTAGA GGTGATCCTC 
AGGCCCAAGA CTGGGTTGCC TGCTATCCAG GAGAAAAACC AGGAGCAGCT AATTCGTGAA 
ACATGTGAAT CTGTCATCAT TGGATCCTTG CATCCTAGAA CCTCAATAAC CATTGTGCTA 
CAGATAGTCA GTGATGCTGG ATCTCTGCTG TCCTGCTGCC TTAATGCAGC TTGCATGGGT 
TTAATGGATG CAGGTCTCCC CATGCGGGCC CTGTTCTGTG GGGTGACATG TGCAATGGAT 
AATGACGGAA CTATAACCCT CGATCCTAAT TTTCGGCAAC AGAAGGAAAG CAGAGCAGTT 
CTAACATTTG CTATTGAAAG CACAGAAAGG AAAGTTCTAA TGATGTCAAA TAGAGGAGTC 
TATTCTGCCA CAGAGCTCCA GCAGTGCATT GCAGCCGCAC AAATCGCATC CGAGAAGCTG 
TTCCAGTTCT ACAGGGACTT CATAAGAAGG AGATATTCTA AATCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed