Gene Symbol |
cert1 |
Entrez Gene ID |
387331 |
Full Name |
collagen, type IV, alpha 3 (Goodpasture antigen) binding protein |
Synonyms |
cert,certl,gpbp,stard11 |
General protein information |
- Preferred Names
collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
Names
collagen type IV alpha-3-binding protein ceramide transfer protein collagen, type IV, alpha 3 binding protein
|
Gene Type |
protein-coding |
Organism |
Xenopus tropicalis(tropical clawed frog) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_012957986.2 |
XP_012813440.1 |
ceramide transfer protein isoform X1 |
XM_012957986.1 |
XP_012813440.1 |
collagen type IV alpha-3-binding protein isoform X1 |
NM_203513.1 |
NP_988844.1 |
ceramide transfer protein |
Gallus gallus (chicken) |
COL4A3BP |
XP_424796.3 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP007093 |
XP_565108.3 |
Xenopus tropicalis (tropical clawed frog) |
col4a3bp |
NP_988844.1 |
Danio rerio (zebrafish) |
LOC797430 |
XP_005161004.1 |
Drosophila melanogaster (fruit fly) |
cert |
NP_648199.1 |
Caenorhabditis elegans (roundworm) |
F25H2.6 |
NP_492762.1 |
Pan troglodytes (chimpanzee) |
COL4A3BP |
XP_526893.2 |
Canis lupus familiaris (dog) |
COL4A3BP |
XP_849925.2 |
Homo sapiens (human) |
COL4A3BP |
NP_001123577.1 |
|
COL4A3BP |
XP_002804474.1 |
Bos taurus (cattle) |
COL4A3BP |
NP_777190.1 |
Mus musculus (house mouse) |
Col4a3bp |
NP_075909.1 |
Rattus norvegicus (Norway rat) |
Col4a3bp |
NP_001102405.1 |
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cert1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cert1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OXa00443 |
Clone ID Related Accession (Same CDS sequence) |
NM_203513.1
|
Accession Version |
NM_203513.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1854bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-25 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
ceramide transfer protein |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC063901.1.
##Evidence-Data-START##
Transcript exon combination :: BC063901.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801
| ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC GGCAGTCACA GATTTGTTCA AGCTCCCCCT AGTTGTCCAC CTCCCACTGA TCTAGTCAGT TCCTCTGATG AACACAGATT CAGGATCCAG GTCGAAGAAA TGGTACAGAA CCACATGACT TATTCTCTGC AAGATGTCGG AGGGGATGCC AACTGGCAGC TGGTTGTTGA AGAGGGGGAA ATGAAGGTCT ATAGGAGAGA AGTGGAAGAG AATGGAATTG TCCTAGATCC CCTGAAAGCT ACACATTCTG TGAAAGGGGT GACCGGCCAC GAGGTCTGCC AGCACTTCTG GAATGTAGAT GTGCGCAATG ACTGGGAAAC GACCATTGAA AATTTCCATG TTGTTGAAAA GTTATCACCA AATGCAATCA TCGTATACCA AACGCACAAG AGAGTTTGGC CTGCTTCCCA GCGTGATGTG TTGTATTTAT CTGCTATTCG GATGGTACCA GCTGCCAGCG AGAATGAAAT GGACACTTGG ATTGTCTGCA ACTTCTCAGT TGACCATGAC AACGCTCCCC TAAACCGATG TGTTCGTGCC AAAATCAATA TTGCGATGAT CTGTCAGACT CTGGTTAGCC CACCGGAAGG AAATAAAGAA ATCAGCAGAG ATAATATTCA GTGCAAAATA ACATATGTTG CTAATGTCAA TCCAGGAGGA TGGGCTCCTG CCTCTGTACT TCGGGCAGTA GCAAAACGGG AGTATCCTAA ATTTCTGAAA CGCTTTACAT CATATGTGCA AGAGAAAACC GCTGGCAAGT CTATTCTTTT CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_988844.1 |
CDS | 169..2022 |
Translation | |
Target ORF information:
RefSeq Version | NM_203513.1 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis ceramide transporter 1 (cert1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_203513.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801
| ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC GGCAGTCACA GATTTGTTCA AGCTCCCCCT AGTTGTCCAC CTCCCACTGA TCTAGTCAGT TCCTCTGATG AACACAGATT CAGGATCCAG GTCGAAGAAA TGGTACAGAA CCACATGACT TATTCTCTGC AAGATGTCGG AGGGGATGCC AACTGGCAGC TGGTTGTTGA AGAGGGGGAA ATGAAGGTCT ATAGGAGAGA AGTGGAAGAG AATGGAATTG TCCTAGATCC CCTGAAAGCT ACACATTCTG TGAAAGGGGT GACCGGCCAC GAGGTCTGCC AGCACTTCTG GAATGTAGAT GTGCGCAATG ACTGGGAAAC GACCATTGAA AATTTCCATG TTGTTGAAAA GTTATCACCA AATGCAATCA TCGTATACCA AACGCACAAG AGAGTTTGGC CTGCTTCCCA GCGTGATGTG TTGTATTTAT CTGCTATTCG GATGGTACCA GCTGCCAGCG AGAATGAAAT GGACACTTGG ATTGTCTGCA ACTTCTCAGT TGACCATGAC AACGCTCCCC TAAACCGATG TGTTCGTGCC AAAATCAATA TTGCGATGAT CTGTCAGACT CTGGTTAGCC CACCGGAAGG AAATAAAGAA ATCAGCAGAG ATAATATTCA GTGCAAAATA ACATATGTTG CTAATGTCAA TCCAGGAGGA TGGGCTCCTG CCTCTGTACT TCGGGCAGTA GCAAAACGGG AGTATCCTAA ATTTCTGAAA CGCTTTACAT CATATGTGCA AGAGAAAACC GCTGGCAAGT CTATTCTTTT CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa25865 |
Clone ID Related Accession (Same CDS sequence) |
XM_012957986.1
|
Accession Version |
XM_012957986.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1788bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-09-07 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
collagen type IV alpha-3-binding protein isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Xenopus tropicalis Annotation Release 103
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCG AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_012813440.1 |
CDS | 345..2132 |
Translation | |
Target ORF information:
RefSeq Version | XM_012957986.1 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (col4a3bp), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_012957986.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCG AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa47700 |
Clone ID Related Accession (Same CDS sequence) |
XM_012957986.2
|
Accession Version |
XM_012957986.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1788bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-17 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
ceramide transfer protein isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Dec 18, 2019 this sequence version replaced XM_012957986.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Xenopus tropicalis Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_012813440.1 |
CDS | 345..2132 |
Translation | |
Target ORF information:
RefSeq Version | XM_012957986.2 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis ceramide transporter 1 (cert1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_012957986.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.