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cert1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol cert1
Entrez Gene ID 387331
Full Name collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
Synonyms cert,certl,gpbp,stard11
General protein information
Preferred Names

collagen, type IV, alpha 3 (Goodpasture antigen) binding protein

Names

collagen type IV alpha-3-binding protein
ceramide transfer protein
collagen, type IV, alpha 3 binding protein
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012957986.2 XP_012813440.1 ceramide transfer protein isoform X1
XM_012957986.1 XP_012813440.1 collagen type IV alpha-3-binding protein isoform X1
NM_203513.1 NP_988844.1 ceramide transfer protein

Pathways from BioSystems


Homologies


Gallus gallus (chicken) COL4A3BP XP_424796.3
Anopheles gambiae (African malaria mosquito) AgaP_AGAP007093 XP_565108.3
Xenopus tropicalis (tropical clawed frog) col4a3bp NP_988844.1
Danio rerio (zebrafish) LOC797430 XP_005161004.1
Drosophila melanogaster (fruit fly) cert NP_648199.1
Caenorhabditis elegans (roundworm) F25H2.6 NP_492762.1
Pan troglodytes (chimpanzee) COL4A3BP XP_526893.2
Canis lupus familiaris (dog) COL4A3BP XP_849925.2
Homo sapiens (human) COL4A3BP NP_001123577.1
COL4A3BP XP_002804474.1
Bos taurus (cattle) COL4A3BP NP_777190.1
Mus musculus (house mouse) Col4a3bp NP_075909.1
Rattus norvegicus (Norway rat) Col4a3bp NP_001102405.1

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cert1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cert1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa00443 NM_203513.1
Latest version!		 Xenopus tropicalis ceramide transporter 1 (cert1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
OXa25865 XM_012957986.1
Latest version!		 Xenopus tropicalis collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (col4a3bp), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
OXa47700 XM_012957986.2
Latest version!		 Xenopus tropicalis ceramide transporter 1 (cert1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa00443
Clone ID Related Accession (Same CDS sequence) NM_203513.1
Accession Version NM_203513.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1854bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-25
Organism Xenopus tropicalis(tropical clawed frog)
Product ceramide transfer protein
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC063901.1. ##Evidence-Data-START## Transcript exon combination :: BC063901.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC 
GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG 
CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG 
ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA 
TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA 
GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC 
TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA 
AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA 
CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA 
TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA 
GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT 
GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT 
AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC 
TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC 
GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA 
TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA 
TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT 
GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC 
GGCAGTCACA GATTTGTTCA AGCTCCCCCT AGTTGTCCAC CTCCCACTGA TCTAGTCAGT 
TCCTCTGATG AACACAGATT CAGGATCCAG GTCGAAGAAA TGGTACAGAA CCACATGACT 
TATTCTCTGC AAGATGTCGG AGGGGATGCC AACTGGCAGC TGGTTGTTGA AGAGGGGGAA 
ATGAAGGTCT ATAGGAGAGA AGTGGAAGAG AATGGAATTG TCCTAGATCC CCTGAAAGCT 
ACACATTCTG TGAAAGGGGT GACCGGCCAC GAGGTCTGCC AGCACTTCTG GAATGTAGAT 
GTGCGCAATG ACTGGGAAAC GACCATTGAA AATTTCCATG TTGTTGAAAA GTTATCACCA 
AATGCAATCA TCGTATACCA AACGCACAAG AGAGTTTGGC CTGCTTCCCA GCGTGATGTG 
TTGTATTTAT CTGCTATTCG GATGGTACCA GCTGCCAGCG AGAATGAAAT GGACACTTGG 
ATTGTCTGCA ACTTCTCAGT TGACCATGAC AACGCTCCCC TAAACCGATG TGTTCGTGCC 
AAAATCAATA TTGCGATGAT CTGTCAGACT CTGGTTAGCC CACCGGAAGG AAATAAAGAA 
ATCAGCAGAG ATAATATTCA GTGCAAAATA ACATATGTTG CTAATGTCAA TCCAGGAGGA 
TGGGCTCCTG CCTCTGTACT TCGGGCAGTA GCAAAACGGG AGTATCCTAA ATTTCTGAAA 
CGCTTTACAT CATATGTGCA AGAGAAAACC GCTGGCAAGT CTATTCTTTT CTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_988844.1
CDS169..2022
Translation

Target ORF information:

RefSeq Version NM_203513.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis ceramide transporter 1 (cert1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_203513.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC 
GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG 
CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG 
ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA 
TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA 
GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC 
TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA 
AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA 
CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA 
TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA 
GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT 
GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT 
AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC 
TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC 
GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA 
TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA 
TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT 
GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC 
GGCAGTCACA GATTTGTTCA AGCTCCCCCT AGTTGTCCAC CTCCCACTGA TCTAGTCAGT 
TCCTCTGATG AACACAGATT CAGGATCCAG GTCGAAGAAA TGGTACAGAA CCACATGACT 
TATTCTCTGC AAGATGTCGG AGGGGATGCC AACTGGCAGC TGGTTGTTGA AGAGGGGGAA 
ATGAAGGTCT ATAGGAGAGA AGTGGAAGAG AATGGAATTG TCCTAGATCC CCTGAAAGCT 
ACACATTCTG TGAAAGGGGT GACCGGCCAC GAGGTCTGCC AGCACTTCTG GAATGTAGAT 
GTGCGCAATG ACTGGGAAAC GACCATTGAA AATTTCCATG TTGTTGAAAA GTTATCACCA 
AATGCAATCA TCGTATACCA AACGCACAAG AGAGTTTGGC CTGCTTCCCA GCGTGATGTG 
TTGTATTTAT CTGCTATTCG GATGGTACCA GCTGCCAGCG AGAATGAAAT GGACACTTGG 
ATTGTCTGCA ACTTCTCAGT TGACCATGAC AACGCTCCCC TAAACCGATG TGTTCGTGCC 
AAAATCAATA TTGCGATGAT CTGTCAGACT CTGGTTAGCC CACCGGAAGG AAATAAAGAA 
ATCAGCAGAG ATAATATTCA GTGCAAAATA ACATATGTTG CTAATGTCAA TCCAGGAGGA 
TGGGCTCCTG CCTCTGTACT TCGGGCAGTA GCAAAACGGG AGTATCCTAA ATTTCTGAAA 
CGCTTTACAT CATATGTGCA AGAGAAAACC GCTGGCAAGT CTATTCTTTT CTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa25865
Clone ID Related Accession (Same CDS sequence) XM_012957986.1
Accession Version XM_012957986.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1788bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product collagen type IV alpha-3-binding protein isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC 
GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG 
CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG 
ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA 
TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA 
GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC 
TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCG 
AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA 
CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA 
TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA 
GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT 
GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT 
AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC 
TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC 
GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA 
TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA 
TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT 
GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC 
GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT 
CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG 
GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT 
TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC 
AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA 
ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT 
TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC 
TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC 
AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC 
AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT 
CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT 
ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012813440.1
CDS345..2132
Translation

Target ORF information:

RefSeq Version XM_012957986.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (col4a3bp), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012957986.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC 
GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG 
CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG 
ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA 
TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA 
GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC 
TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCG 
AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA 
CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA 
TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA 
GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT 
GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT 
AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC 
TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC 
GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA 
TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA 
TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT 
GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC 
GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT 
CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG 
GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT 
TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC 
AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA 
ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT 
TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC 
TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC 
AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC 
AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT 
CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT 
ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa47700
Clone ID Related Accession (Same CDS sequence) XM_012957986.2
Accession Version XM_012957986.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1788bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product ceramide transfer protein isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012957986.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC 
GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG 
CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG 
ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA 
TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA 
GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC 
TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA 
AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA 
CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA 
TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA 
GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT 
GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT 
AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC 
TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC 
GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA 
TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA 
TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT 
GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC 
GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT 
CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG 
GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT 
TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC 
AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA 
ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT 
TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC 
TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC 
AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC 
AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT 
CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT 
ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012813440.1
CDS345..2132
Translation

Target ORF information:

RefSeq Version XM_012957986.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis ceramide transporter 1 (cert1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012957986.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGTCGGATA ATCAGAGCTG GAATTCCTCG GGCTCAGAGG AAGACCTGGA GACTGAGTCC 
GGGCCGCCGG TTGAGAGGTG CGGTGTCCTG TCTAAGTGGA CCAACTATAT TCATGGCTGG 
CAGGATCGAT GGGTAGTCTT GAAAAACAAC ACATTAAGCT ACTACAAATC AGAGGATGAG 
ACAGAATATG GCTGCAGGGG ATCCATTTGC CTTAGCAAAG CTGTTATCAC GCCTCATGAA 
TTTGATGAGT GCCGTTTCGA TATCAGTGTT AATGACAGTG TGTGGTATCT CCGTGCTCAA 
GACCCAGATC ATCGGCAAAG ATGGATAGAT TCAATTGAAC AACACAAGTC TGAATCTGGC 
TATGGATCAG AATCCAGTTT ACGGCGGCAT GGCTCAATGG TGTCCCTCGT GTCTGGGGCA 
AGTGGTTACT CTGCCACATC CACGTCATCA TTTAAGAAAG GACACAGCCT GCGGGAGAAA 
CTGGCGGAAA TGGAGACTTT CCGAGACATC CTATGCAGAC AGGTTGACAC GCTGCAGAAA 
TATTTTGATG CGTGTGCAGA TGCAGTTTCC AAAGATGAGC TTGAAAGGGA TAAAGTTGAA 
GACGATGAAG ATGATTTTCT TCATAGCCAT CCCAATGGAG ATTACATTCA TAGCAGTATT 
GGGAGTAAAG ATAAATTATT CCAGCACGTG TCTCCAAAGG GCATTAATGG CATTGACTTT 
AAAGGAGAAG CCATCACATT TAAAGCTACC ACTGCAGGAA TATTGGCTAC TTTGTCGCAC 
TGCATTGATC TCATGGTGAA GCGGGAGGAC AGCTGGCAGA AACGGCTTGA TAAGGAAATC 
GAGAAGAGGA GGCGAGTAGA GGAAGCCTAT AAGAATGCAA TGACTGAACT CAAAAAGAAA 
TCTCATTTTG GTGGACCAGA TTATGAGGAA GGCCCCAACA GCCTGATAAA TGAAGAAGAA 
TTCTTTGATG CGGTTGAAGC TGCTCTGGAC AGACAAGATA AAATTGAGCA GTCTCAGAGT 
GAAAAGGGCA GATCACACTG GCCATCTTCT CTTCCTTCAA CTGAAGCATA CACAACTGCC 
GGCAGTCACA GATTTGTTCA AGCTGTCGAA GAAATGGTAC AGAACCACAT GACTTATTCT 
CTGCAAGATG TCGGAGGGGA TGCCAACTGG CAGCTGGTTG TTGAAGAGGG GGAAATGAAG 
GTCTATAGGA GAGAAGTGGA AGAGAATGGA ATTGTCCTAG ATCCCCTGAA AGCTACACAT 
TCTGTGAAAG GGGTGACCGG CCACGAGGTC TGCCAGCACT TCTGGAATGT AGATGTGCGC 
AATGACTGGG AAACGACCAT TGAAAATTTC CATGTTGTTG AAAAGTTATC ACCAAATGCA 
ATCATCGTAT ACCAAACGCA CAAGAGAGTT TGGCCTGCTT CCCAGCGTGA TGTGTTGTAT 
TTATCTGCTA TTCGGATGGT ACCAGCTGCC AGCGAGAATG AAATGGACAC TTGGATTGTC 
TGCAACTTCT CAGTTGACCA TGACAACGCT CCCCTAAACC GATGTGTTCG TGCCAAAATC 
AATATTGCGA TGATCTGTCA GACTCTGGTT AGCCCACCGG AAGGAAATAA AGAAATCAGC 
AGAGATAATA TTCAGTGCAA AATAACATAT GTTGCTAATG TCAATCCAGG AGGATGGGCT 
CCTGCCTCTG TACTTCGGGC AGTAGCAAAA CGGGAGTATC CTAAATTTCT GAAACGCTTT 
ACATCATATG TGCAAGAGAA AACCGCTGGC AAGTCTATTC TTTTCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P