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ctnnbl1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol ctnnbl1
Entrez Gene ID 394960
Full Name catenin beta like 1
General protein information
Preferred Names

catenin beta like 1

Names

beta-catenin-like protein 1
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012971607.1 XP_012827061.1 beta-catenin-like protein 1 isoform X1
NM_204004.1 NP_989335.1 beta-catenin-like protein 1
XM_012971607.2 XP_012827061.1 beta-catenin-like protein 1 isoform X1

Pathways from BioSystems


Homologies


Homo sapiens (human) CTNNBL1 NP_110517.2
Rattus norvegicus (Norway rat) Ctnnbl1 NP_001020041.1
Gallus gallus (chicken) CTNNBL1 XP_001234108.1
Arabidopsis thaliana (thale cress) AT3G02710 NP_186920.2
Xenopus tropicalis (tropical clawed frog) ctnnbl1 NP_989335.1
Oryza sativa (rice) Os02g0831300 NP_001048618.1
Danio rerio (zebrafish) ctnnbl1 NP_957160.1
Drosophila melanogaster (fruit fly) CG11964 NP_649847.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP001357 XP_321789.1
Caenorhabditis elegans (roundworm) M01E11.2 NP_491634.1
Canis lupus familiaris (dog) CTNNBL1 XP_005635099.1
Mus musculus (house mouse) Ctnnbl1 NP_079956.3
Pan troglodytes (chimpanzee) CTNNBL1 NP_001233581.1
CTNNBL1 XP_001091478.1
Bos taurus (cattle) CTNNBL1 NP_777062.2

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ctnnbl1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ctnnbl1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa23902 NM_204004.1
Latest version!		 Xenopus tropicalis catenin beta like 1 (ctnnbl1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
OXa26169 XM_012971607.1
Latest version!		 Xenopus tropicalis catenin beta like 1 (ctnnbl1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
OXa50002 XM_012971607.2
Latest version!		 Xenopus tropicalis catenin beta like 1 (ctnnbl1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 14-16 $307.30
$439.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa23902
Clone ID Related Accession (Same CDS sequence) NM_204004.1
Accession Version NM_204004.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1662bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-21
Organism Xenopus tropicalis(tropical clawed frog)
Product beta-catenin-like protein 1
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC064212.1. ##Evidence-Data-START## Transcript exon combination :: BC064212.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
ATGGATGTGG GGGAGTTGTT GCGGTACCAG CCGGACAGAG GCACAAAACG AGGGCGAGAT 
GATGAACCGG AAGACTTGAG ACCACCGAGA AAAGAAAGAG GAGGGAGGAA CTGGCACCGA 
GATGAGGAAC GGGGGCCAAC TGCAGAGGAG GATAGGAACG CATTGGATGA TGGTGATGAT 
GAGGAAGAGA ATGAAACACT GGATGAGGGT GCAGTGAAAA GGATGATCCT GAATTTCGAA 
AAGAGATCCT ACAAGAACCA AGAACTACGT ATCAAATTCC CAGACAACCC TGAGAAGTTC 
ATGGAGTCAG AACTAGACCT GAATGATATT ATCCAGGAGA TGCATGTTAT TGCCACTATA 
CCAGATCTGT ACCATCTACT TGTGGAGCTC AATGCTGTGC AGTCACTGCT TGGCTTGTTA 
AGCCATGAGA ACACTGATGT GTGCATTGCT GTGGTTGACC TGCTGCAGGA ACTAACGGAT 
ATTGACACAC TTCATGAGAG CGAAGAGGGT GCCCAGGTCC TTATAGATGC ACTGTTGGAA 
GGTCAAGTCG TTGCTCTCCT GGTGCAGAAT CTGGAACGCC TGGATGAATC TACGAAGGAG 
GAGGCAGATG GAGTTCACAA TACCCTAGCA ATCACTGAGA ATATGACGGA GTTTCGCCCT 
GAAATATGCT CAGACGCTGC ACAGCAGGGA CTCCTCCATT GGCTGCTCAA AAGACTGAAG 
GCCAAGATGC CGTTTGATGC CAACAAGCTG TACTGCAGTG AGATCCTGGC CATTCTTTTA 
CAGAACAACG ATGACACTCG GGAGCTACTG GGGGAGCTGG ACGGAATAGA TGTGCTGCTT 
CAGCAGTTGT CGGTTTTTAA GCGCCATGAT CCAGGAACAG CAGAAGAGCA GGAGATGATG 
GAGAATCTTT TTGATGCACT TTGCTCCTGT CTGATGCTGA GCAGCAACAG AGACAGGTTC 
CTGAAGGGAG AGGGTCTGCA GCTCATGAAC CTCATGCTCC GCGAGAAAAA AATGTCCCGT 
TGCAGTGCCC TGCGGGTATT AGATCACGCC ATGATCGGCC CAGAGGGTAC AGATAATTGT 
CACAAGTTTG TCGACATCCT CGGACTCCGA ACCATCTTTC CTCTTTTCAT GAAATCTCCC 
AAAAAAGCAA AGAAAACCGG CGTCTCTGAG AAGGAGCATG AGGAACACGT GTGCTCCATC 
CTGGCCTCGC TGCTGCGGAA CCTGAGGGGT CAGCAGAGGA CACGGCTTCT CAGCAAGTTC 
ACAGAAAGTG ACTGCGAAAA GGTGGATCGG CTCATGGAGT TGTACTTTAA ATACCTGGAG 
GCTGTACGGG TGGCTGACAA GAAGATCGAG GGAGAGAAGC ATGATATGGT GCGCCGAGGG 
GAGATTTTAG ATGATGATGT CGAGGAGGAG TTTTACTTGC GAAGATTGGA TGCCGGCCTC 
TTCCTGCTTC AGCTCCTGTG TTACGTCACA GCGGAGATCT GTAACAACAA CCTGCCGCAG 
ATTCGCCAGA GAGTGCTGCA AATTCTAAAC ATGAGGGGAA GCTCTGTGAA AATCATGAGA 
CATATTCTAA AAGAATACTC TGAGAGCATT GGTGATGGGA AGAGCGAAGA GTTCCGGGAA 
AGTGAGCAAA AGAGAATTCA GGAGCTGCTG GAGACGCTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_989335.1
CDS10..1671
Translation

Target ORF information:

RefSeq Version NM_204004.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis catenin beta like 1 (ctnnbl1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_204004.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
ATGGATGTGG GGGAGTTGTT GCGGTACCAG CCGGACAGAG GCACAAAACG AGGGCGAGAT 
GATGAACCGG AAGACTTGAG ACCACCGAGA AAAGAAAGAG GAGGGAGGAA CTGGCACCGA 
GATGAGGAAC GGGGGCCAAC TGCAGAGGAG GATAGGAACG CATTGGATGA TGGTGATGAT 
GAGGAAGAGA ATGAAACACT GGATGAGGGT GCAGTGAAAA GGATGATCCT GAATTTCGAA 
AAGAGATCCT ACAAGAACCA AGAACTACGT ATCAAATTCC CAGACAACCC TGAGAAGTTC 
ATGGAGTCAG AACTAGACCT GAATGATATT ATCCAGGAGA TGCATGTTAT TGCCACTATA 
CCAGATCTGT ACCATCTACT TGTGGAGCTC AATGCTGTGC AGTCACTGCT TGGCTTGTTA 
AGCCATGAGA ACACTGATGT GTGCATTGCT GTGGTTGACC TGCTGCAGGA ACTAACGGAT 
ATTGACACAC TTCATGAGAG CGAAGAGGGT GCCCAGGTCC TTATAGATGC ACTGTTGGAA 
GGTCAAGTCG TTGCTCTCCT GGTGCAGAAT CTGGAACGCC TGGATGAATC TACGAAGGAG 
GAGGCAGATG GAGTTCACAA TACCCTAGCA ATCACTGAGA ATATGACGGA GTTTCGCCCT 
GAAATATGCT CAGACGCTGC ACAGCAGGGA CTCCTCCATT GGCTGCTCAA AAGACTGAAG 
GCCAAGATGC CGTTTGATGC CAACAAGCTG TACTGCAGTG AGATCCTGGC CATTCTTTTA 
CAGAACAACG ATGACACTCG GGAGCTACTG GGGGAGCTGG ACGGAATAGA TGTGCTGCTT 
CAGCAGTTGT CGGTTTTTAA GCGCCATGAT CCAGGAACAG CAGAAGAGCA GGAGATGATG 
GAGAATCTTT TTGATGCACT TTGCTCCTGT CTGATGCTGA GCAGCAACAG AGACAGGTTC 
CTGAAGGGAG AGGGTCTGCA GCTCATGAAC CTCATGCTCC GCGAGAAAAA AATGTCCCGT 
TGCAGTGCCC TGCGGGTATT AGATCACGCC ATGATCGGCC CAGAGGGTAC AGATAATTGT 
CACAAGTTTG TCGACATCCT CGGACTCCGA ACCATCTTTC CTCTTTTCAT GAAATCTCCC 
AAAAAAGCAA AGAAAACCGG CGTCTCTGAG AAGGAGCATG AGGAACACGT GTGCTCCATC 
CTGGCCTCGC TGCTGCGGAA CCTGAGGGGT CAGCAGAGGA CACGGCTTCT CAGCAAGTTC 
ACAGAAAGTG ACTGCGAAAA GGTGGATCGG CTCATGGAGT TGTACTTTAA ATACCTGGAG 
GCTGTACGGG TGGCTGACAA GAAGATCGAG GGAGAGAAGC ATGATATGGT GCGCCGAGGG 
GAGATTTTAG ATGATGATGT CGAGGAGGAG TTTTACTTGC GAAGATTGGA TGCCGGCCTC 
TTCCTGCTTC AGCTCCTGTG TTACGTCACA GCGGAGATCT GTAACAACAA CCTGCCGCAG 
ATTCGCCAGA GAGTGCTGCA AATTCTAAAC ATGAGGGGAA GCTCTGTGAA AATCATGAGA 
CATATTCTAA AAGAATACTC TGAGAGCATT GGTGATGGGA AGAGCGAAGA GTTCCGGGAA 
AGTGAGCAAA AGAGAATTCA GGAGCTGCTG GAGACGCTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa26169
Clone ID Related Accession (Same CDS sequence) XM_012971607.1
Accession Version XM_012971607.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1722bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product beta-catenin-like protein 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030686.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGAGTCTG CTCCTGTATG GGCTGGGTAC CGGCGGGATA TCCGCAAAGC AGTCGCAACC 
CGTCTGGGAT CTACGTCATG TCCCAACCGT CCGGACAGAG GCACAAAACG AGGGCGAGAT 
GATGAACCGG AAGACTTGAG ACCACCGAGA AAAGAAAGAG GAGGGAGGAA CTGGCACCGA 
GATGAGGAAC GGGGGCCAAC TGCAGAGGAG GATAGGAACG CATTGGATGA TGGTGATGAT 
GAGGAAGAGA ATGAAACACT GGATGAGGGT GCAGTGAAAA GGATGATCCT GAATTTCGAA 
AAGAGATCCT ACAAGAACCA AGAACTACGT ATCAAATTCC CAGACAACCC TGAGAAGTTC 
ATGGAGTCAG AACTAGACCT GAATGATATT ATCCAGGAGA TGCATGTTAT TGCCACTATA 
CCAGATCTGT ACCATCTACT TGTGGAGCTC AATGCTGTGC AGTCACTGCT TGGCTTGTTA 
AGCCATGAGA ACACTGATGT GTGCATTGCT GTGGTTGACC TGCTGCAGGA ACTAACGGAT 
ATTGACACAC TTCATGAGAG CGAAGAGGGT GCCCAGGTCC TTATAGATGC ACTGTTGGAA 
GGTCAAGTAG TTGCTCTCCT GGTGCAGAAT CTGGAACGCC TGGATGAATC TACGAAGGAG 
GAGGCAGATG GAGTTCACAA TACCCTAGCA ATCATTGAGA ATATGACAGA GTTTCGCCCT 
GAAATATGCT CAGACGCTGC ACAGCAGGGA CTCCTCCATT GGCTGCTCAA AAGACTGAAG 
GCCAAGATGC CGTTTGATGC CAACAAGCTG TACTGCAGTG AGATCCTGGC CATTCTTTTA 
CAGAACAACG ATGACACTCG GGAGCTACTG GGGGAGCTGG ACGGAATAGA TGTGCTGCTT 
CAGCAGTTGT CGGTTTTTAA GCGCCATGAT CCAGGAACAG CAGAAGAGCA GGAGATGATG 
GAGAATCTTT TTGATGCACT TTGCTCCTGT CTGATGCTGA GCAGCAACAG AGACAGGTTC 
CTGAAGGGAG AGGGTCTGCA GCTCATGAAC CTCATGCTCC GCGAGAAAAA AATGTCCCGT 
TGCAGTGCCC TGCGGGTATT AGATCACGCC ATGATCGGCC CAGAGGGTAC AGATAATTGT 
CACAAGTTTG TCGACATCCT CGGACTCCGA ACCATCTTTC CTCTTTTCAT GAAATCTCCC 
AAAAAAGCAA AGAAAACCGG CGTCTCTGAG AAGGAGCATG AGGAACACGT GTGCTCCATC 
CTGGCCTCGC TGCTGCGGAA CCTGAGGGGT CAGCAGAGGA CACGGCTTCT CAGCAAGTTC 
ACAGAAAGTG ACTGCGAAAA GGTGGATCGG CTCATGGAGT TGTACTTTAA ATACCTGGAG 
GCTGTACGGG TGGCTGACAA GAAGATCGAG GGAGAGAAGC ATGATATGGT GCGCCGAGGG 
GAGATTTTAG ATGATGATGT CGAGGAGGAG TTTTACTTGC GAAGATTGGA TGCCGGCCTC 
TTCCTGCTTC AGCTCCTGTG TTACGTCACA GCGGAGATCT GTAACAACAA CCTGCCGCAG 
ATTCGCCAGA GAGTGCTGCA AATTCTAAAC ATGAGGGGAA GCTCTGTGAA AATCATGAGA 
CATATTCTAA AAGAATACTC TGAGAGCATT GGTGATGGGA AGAGCGAAGA GTTCCGGGAA 
AGTGAGCAAA AGAGAATTCA GGAGCTGCTG GAGACGCTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012827061.1
CDS16..1737
Translation

Target ORF information:

RefSeq Version XM_012971607.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis catenin beta like 1 (ctnnbl1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012971607.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGAGTCTG CTCCTGTATG GGCTGGGTAC CGGCGGGATA TCCGCAAAGC AGTCGCAACC 
CGTCTGGGAT CTACGTCATG TCCCAACCGT CCGGACAGAG GCACAAAACG AGGGCGAGAT 
GATGAACCGG AAGACTTGAG ACCACCGAGA AAAGAAAGAG GAGGGAGGAA CTGGCACCGA 
GATGAGGAAC GGGGGCCAAC TGCAGAGGAG GATAGGAACG CATTGGATGA TGGTGATGAT 
GAGGAAGAGA ATGAAACACT GGATGAGGGT GCAGTGAAAA GGATGATCCT GAATTTCGAA 
AAGAGATCCT ACAAGAACCA AGAACTACGT ATCAAATTCC CAGACAACCC TGAGAAGTTC 
ATGGAGTCAG AACTAGACCT GAATGATATT ATCCAGGAGA TGCATGTTAT TGCCACTATA 
CCAGATCTGT ACCATCTACT TGTGGAGCTC AATGCTGTGC AGTCACTGCT TGGCTTGTTA 
AGCCATGAGA ACACTGATGT GTGCATTGCT GTGGTTGACC TGCTGCAGGA ACTAACGGAT 
ATTGACACAC TTCATGAGAG CGAAGAGGGT GCCCAGGTCC TTATAGATGC ACTGTTGGAA 
GGTCAAGTAG TTGCTCTCCT GGTGCAGAAT CTGGAACGCC TGGATGAATC TACGAAGGAG 
GAGGCAGATG GAGTTCACAA TACCCTAGCA ATCATTGAGA ATATGACAGA GTTTCGCCCT 
GAAATATGCT CAGACGCTGC ACAGCAGGGA CTCCTCCATT GGCTGCTCAA AAGACTGAAG 
GCCAAGATGC CGTTTGATGC CAACAAGCTG TACTGCAGTG AGATCCTGGC CATTCTTTTA 
CAGAACAACG ATGACACTCG GGAGCTACTG GGGGAGCTGG ACGGAATAGA TGTGCTGCTT 
CAGCAGTTGT CGGTTTTTAA GCGCCATGAT CCAGGAACAG CAGAAGAGCA GGAGATGATG 
GAGAATCTTT TTGATGCACT TTGCTCCTGT CTGATGCTGA GCAGCAACAG AGACAGGTTC 
CTGAAGGGAG AGGGTCTGCA GCTCATGAAC CTCATGCTCC GCGAGAAAAA AATGTCCCGT 
TGCAGTGCCC TGCGGGTATT AGATCACGCC ATGATCGGCC CAGAGGGTAC AGATAATTGT 
CACAAGTTTG TCGACATCCT CGGACTCCGA ACCATCTTTC CTCTTTTCAT GAAATCTCCC 
AAAAAAGCAA AGAAAACCGG CGTCTCTGAG AAGGAGCATG AGGAACACGT GTGCTCCATC 
CTGGCCTCGC TGCTGCGGAA CCTGAGGGGT CAGCAGAGGA CACGGCTTCT CAGCAAGTTC 
ACAGAAAGTG ACTGCGAAAA GGTGGATCGG CTCATGGAGT TGTACTTTAA ATACCTGGAG 
GCTGTACGGG TGGCTGACAA GAAGATCGAG GGAGAGAAGC ATGATATGGT GCGCCGAGGG 
GAGATTTTAG ATGATGATGT CGAGGAGGAG TTTTACTTGC GAAGATTGGA TGCCGGCCTC 
TTCCTGCTTC AGCTCCTGTG TTACGTCACA GCGGAGATCT GTAACAACAA CCTGCCGCAG 
ATTCGCCAGA GAGTGCTGCA AATTCTAAAC ATGAGGGGAA GCTCTGTGAA AATCATGAGA 
CATATTCTAA AAGAATACTC TGAGAGCATT GGTGATGGGA AGAGCGAAGA GTTCCGGGAA 
AGTGAGCAAA AGAGAATTCA GGAGCTGCTG GAGACGCTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa50002
Clone ID Related Accession (Same CDS sequence) XM_012971607.2
Accession Version XM_012971607.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1722bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product beta-catenin-like protein 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030686.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012971607.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGAGTCTG CTCCTGTATG GGCTGGGTAC CGGCGGGATA TCCGCAAAGC AGTCGCAACC 
CGTCTGGGAT CTACGTCATG TCCCAACCGT CCGGACAGAG GCACAAAACG AGGGCGAGAT 
GATGAACCGG AAGACTTGAG ACCACCGAGA AAAGAAAGAG GAGGGAGGAA CTGGCACCGA 
GATGAGGAAC GGGGGCCAAC TGCAGAGGAG GATAGGAACG CATTGGATGA TGGTGATGAT 
GAGGAAGAGA ATGAAACACT GGATGAGGGT GCAGTGAAAA GGATGATCCT GAATTTCGAA 
AAGAGATCCT ACAAGAACCA AGAACTACGT ATCAAATTCC CAGACAACCC TGAGAAGTTC 
ATGGAGTCAG AACTAGACCT GAATGATATT ATCCAGGAGA TGCATGTTAT TGCCACTATA 
CCAGATCTGT ACCATCTACT TGTGGAGCTC AATGCTGTGC AGTCACTGCT TGGCTTGTTA 
AGCCATGAGA ACACTGATGT GTGCATTGCT GTGGTTGACC TGCTGCAGGA ACTAACGGAT 
ATTGACACAC TTCATGAGAG CGAAGAGGGT GCCCAGGTCC TTATAGATGC ACTGTTGGAA 
GGTCAAGTCG TTGCTCTCCT GGTGCAGAAT CTGGAACGCC TGGATGAATC TACGAAGGAG 
GAGGCAGATG GAGTTCACAA TACCCTAGCA ATCATTGAGA ATATGACGGA GTTTCGCCCT 
GAAATATGCT CAGACGCTGC ACAGCAGGGA CTCCTCCATT GGCTGCTCAA AAGACTGAAG 
GCCAAGATGC CGTTTGATGC CAACAAGCTG TACTGCAGTG AGATCCTGGC CATTCTTTTA 
CAGAACAACG ATGACACTCG GGAGCTACTG GGGGAGCTGG ACGGAATAGA TGTGCTGCTT 
CAGCAGTTGT CGGTTTTTAA GCGCCATGAT CCAGGAACAG CAGAAGAGCA GGAGATGATG 
GAGAATCTTT TTGATGCACT TTGCTCCTGT CTGATGCTGA GCAGCAACAG AGACAGGTTC 
CTGAAGGGAG AGGGTCTGCA GCTCATGAAC CTCATGCTCC GCGAGAAAAA AATGTCCCGT 
TGCAGTGCCC TGCGGGTATT AGATCACGCC ATGATCGGCC CAGAGGGTAC AGATAATTGT 
CACAAGTTTG TCGACATCCT CGGACTCCGA ACCATCTTTC CTCTTTTCAT GAAATCTCCC 
AAAAAAGCAA AGAAAACCGG CGTCTCTGAG AAGGAGCATG AGGAACACGT GTGCTCCATC 
CTGGCCTCGC TGCTGCGGAA CCTGAGGGGT CAGCAGAGGA CACGGCTTCT CAGCAAGTTC 
ACAGAAAGTG ACTGCGAAAA GGTGGATCGG CTCATGGAGT TGTACTTTAA ATACCTGGAG 
GCTGTACGGG TGGCTGACAA GAAGATCGAG GGAGAGAAGC ATGATATGGT GCGCCGAGGG 
GAGATTTTAG ATGATGATGT CGAGGAGGAG TTTTACTTGC GAAGATTGGA TGCCGGCCTC 
TTCCTGCTTC AGCTCCTGTG TTACGTCACA GCGGAGATCT GTAACAACAA CCTGCCGCAG 
ATTCGCCAGA GAGTGCTGCA AATTCTAAAC ATGAGGGGAA GCTCTGTGAA AATCATGAGA 
CATATTCTAA AAGAATACTC TGAGAGCATT GGTGATGGGA AGAGCGAAGA GTTCCGGGAA 
AGTGAGCAAA AGAGAATTCA GGAGCTGCTG GAGACGCTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012827061.1
CDS16..1737
Translation

Target ORF information:

RefSeq Version XM_012971607.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis catenin beta like 1 (ctnnbl1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012971607.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGAGTCTG CTCCTGTATG GGCTGGGTAC CGGCGGGATA TCCGCAAAGC AGTCGCAACC 
CGTCTGGGAT CTACGTCATG TCCCAACCGT CCGGACAGAG GCACAAAACG AGGGCGAGAT 
GATGAACCGG AAGACTTGAG ACCACCGAGA AAAGAAAGAG GAGGGAGGAA CTGGCACCGA 
GATGAGGAAC GGGGGCCAAC TGCAGAGGAG GATAGGAACG CATTGGATGA TGGTGATGAT 
GAGGAAGAGA ATGAAACACT GGATGAGGGT GCAGTGAAAA GGATGATCCT GAATTTCGAA 
AAGAGATCCT ACAAGAACCA AGAACTACGT ATCAAATTCC CAGACAACCC TGAGAAGTTC 
ATGGAGTCAG AACTAGACCT GAATGATATT ATCCAGGAGA TGCATGTTAT TGCCACTATA 
CCAGATCTGT ACCATCTACT TGTGGAGCTC AATGCTGTGC AGTCACTGCT TGGCTTGTTA 
AGCCATGAGA ACACTGATGT GTGCATTGCT GTGGTTGACC TGCTGCAGGA ACTAACGGAT 
ATTGACACAC TTCATGAGAG CGAAGAGGGT GCCCAGGTCC TTATAGATGC ACTGTTGGAA 
GGTCAAGTCG TTGCTCTCCT GGTGCAGAAT CTGGAACGCC TGGATGAATC TACGAAGGAG 
GAGGCAGATG GAGTTCACAA TACCCTAGCA ATCATTGAGA ATATGACGGA GTTTCGCCCT 
GAAATATGCT CAGACGCTGC ACAGCAGGGA CTCCTCCATT GGCTGCTCAA AAGACTGAAG 
GCCAAGATGC CGTTTGATGC CAACAAGCTG TACTGCAGTG AGATCCTGGC CATTCTTTTA 
CAGAACAACG ATGACACTCG GGAGCTACTG GGGGAGCTGG ACGGAATAGA TGTGCTGCTT 
CAGCAGTTGT CGGTTTTTAA GCGCCATGAT CCAGGAACAG CAGAAGAGCA GGAGATGATG 
GAGAATCTTT TTGATGCACT TTGCTCCTGT CTGATGCTGA GCAGCAACAG AGACAGGTTC 
CTGAAGGGAG AGGGTCTGCA GCTCATGAAC CTCATGCTCC GCGAGAAAAA AATGTCCCGT 
TGCAGTGCCC TGCGGGTATT AGATCACGCC ATGATCGGCC CAGAGGGTAC AGATAATTGT 
CACAAGTTTG TCGACATCCT CGGACTCCGA ACCATCTTTC CTCTTTTCAT GAAATCTCCC 
AAAAAAGCAA AGAAAACCGG CGTCTCTGAG AAGGAGCATG AGGAACACGT GTGCTCCATC 
CTGGCCTCGC TGCTGCGGAA CCTGAGGGGT CAGCAGAGGA CACGGCTTCT CAGCAAGTTC 
ACAGAAAGTG ACTGCGAAAA GGTGGATCGG CTCATGGAGT TGTACTTTAA ATACCTGGAG 
GCTGTACGGG TGGCTGACAA GAAGATCGAG GGAGAGAAGC ATGATATGGT GCGCCGAGGG 
GAGATTTTAG ATGATGATGT CGAGGAGGAG TTTTACTTGC GAAGATTGGA TGCCGGCCTC 
TTCCTGCTTC AGCTCCTGTG TTACGTCACA GCGGAGATCT GTAACAACAA CCTGCCGCAG 
ATTCGCCAGA GAGTGCTGCA AATTCTAAAC ATGAGGGGAA GCTCTGTGAA AATCATGAGA 
CATATTCTAA AAGAATACTC TGAGAGCATT GGTGATGGGA AGAGCGAAGA GTTCCGGGAA 
AGTGAGCAAA AGAGAATTCA GGAGCTGCTG GAGACGCTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P