Gene Symbol | gapdh |
Entrez Gene ID | 448356 |
Full Name | glyceraldehyde-3-phosphate dehydrogenase |
Synonyms | g3pd,gapd |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » gapdh cDNA ORF clone
gRNAs
Gene Symbol | gapdh |
Entrez Gene ID | 448356 |
Full Name | glyceraldehyde-3-phosphate dehydrogenase |
Synonyms | g3pd,gapd |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
NM_001004949.2 | NP_001004949.1 | glyceraldehyde-3-phosphate dehydrogenase |
XM_012966386.2 | XP_012821840.1 | glyceraldehyde-3-phosphate dehydrogenase isoform X1 |
XM_012966386.3 | XP_012821840.1 | glyceraldehyde-3-phosphate dehydrogenase isoform X1 |
Canis lupus familiaris (dog) | LOC100688969 | XP_003435697.1 |
Bos taurus (cattle) | GAPDH | NP_001029206.1 |
Mus musculus (house mouse) | Gapdh | NP_032110.1 |
Mus musculus (house mouse) | Gm20899 | XP_001476757.1 |
Gallus gallus (chicken) | GAPDH | NP_989636.1 |
Caenorhabditis elegans (roundworm) | gpd-1 | NP_496237.1 |
Caenorhabditis elegans (roundworm) | gpd-3 | NP_508534.3 |
Saccharomyces cerevisiae (baker's yeast) | TDH2 | NP_012542.1 |
Drosophila melanogaster (fruit fly) | Gapdh1 | NP_525108.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009623 | XP_318655.2 |
Caenorhabditis elegans (roundworm) | gpd-4 | NP_496192.1 |
Caenorhabditis elegans (roundworm) | gpd-2 | NP_508535.1 |
Saccharomyces cerevisiae (baker's yeast) | TDH1 | NP_012483.3 |
Kluyveromyces lactis | KLLA0F20988g | XP_456022.1 |
Schizosaccharomyces pombe (fission yeast) | gpd3 | NP_595236.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_01084 | XP_003717853.1 |
Oryza sativa (rice) | Os08g0126300 | NP_001060897.1 |
GAPDH | XP_001105471.1 | |
Canis lupus familiaris (dog) | LOC100683724 | XP_003434435.1 |
Rattus norvegicus (Norway rat) | Gapdh | NP_058704.1 |
Drosophila melanogaster (fruit fly) | Gapdh2 | NP_001259584.1 |
Saccharomyces cerevisiae (baker's yeast) | TDH3 | NP_011708.3 |
Schizosaccharomyces pombe (fission yeast) | tdh1 | NP_596154.1 |
Pan troglodytes (chimpanzee) | GAPDH | XP_508955.1 |
Canis lupus familiaris (dog) | GAPDH | NP_001003142.1 |
Homo sapiens (human) | GAPDH | NP_002037.2 |
Danio rerio (zebrafish) | gapdh | NP_001108586.1 |
Neurospora crassa | NCU01528 | XP_956977.1 |
Xenopus tropicalis (tropical clawed frog) | gapdh | NP_001004949.1 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following gapdh gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the gapdh cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa22829 | |
Clone ID Related Accession (Same CDS sequence) | NM_001004949.2 | |
Accession Version | NM_001004949.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | glyceraldehyde-3-phosphate dehydrogenase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075438.1. On Aug 31, 2012 this sequence version replaced NM_001004949.1. ##Evidence-Data-START## Transcript exon combination :: BC075438.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01758129, SAMN05930350 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTTACA TGTTCAAATA TGACTCCACC CACGGCCGAT TCAAGGGAAC AGTGTGTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001004949.1 |
CDS | 146..1027 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTACA TGTTCAAATA TGACTCCACC CACGGCCGAT TCAAGGGAAC AGTGTGTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26539 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966386.2 | |
Accession Version | XM_012966386.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1005bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | glyceraldehyde-3-phosphate dehydrogenase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030683.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012966386.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTGTCA AGATTGGAAT CAATGGATTT GGCCGCATCG GGCGCCTGGT GACCCGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012821840.1 |
CDS | 237..1241 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACTGTCA AGATTGGAAT CAATGGATTT GGCCGCATCG GGCGCCTGGT GACCCGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa61366 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966386.3 | |
Accession Version | XM_012966386.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1005bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | glyceraldehyde-3-phosphate dehydrogenase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030683.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012966386.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTGTCA AGATTGGAAT CAATGGATTT GGCCGCATCG GGCGCCTGGT GACCCGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012821840.1 |
CDS | 232..1236 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACTGTCA AGATTGGAAT CAATGGATTT GGCCGCATCG GGCGCCTGGT GACCCGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |