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fcf1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol fcf1
Entrez Gene ID 448479
Full Name FCF1, rRNA-processing protein
Synonyms C14orf111
General protein information
Preferred Names

FCF1, rRNA-processing protein

Names

rRNA-processing protein FCF1 homolog
FCF1 small subunit (SSU) processome component homolog
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001004999.1 NP_001004999.1 rRNA-processing protein FCF1 homolog

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) FCF1 XP_003314465.1
Caenorhabditis elegans (roundworm) F30A10.9 NP_492523.1
Kluyveromyces lactis KLLA0A07018g XP_451311.1
Oryza sativa (rice) Os06g0158600 NP_001056867.1
Gallus gallus (chicken) FCF1 XP_421270.1
Danio rerio (zebrafish) fcf1 NP_001017601.1
Saccharomyces cerevisiae (baker's yeast) FCF1 NP_010626.1
Arabidopsis thaliana (thale cress) AT2G46230 NP_566068.1
Canis lupus familiaris (dog) FCF1 XP_537508.2
Drosophila melanogaster (fruit fly) Bka NP_524867.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP009504 XP_310192.3
Eremothecium gossypii AGOS_AEL102W NP_984759.1
Schizosaccharomyces pombe (fission yeast) SPBC32H8.04c NP_595610.1
Magnaporthe oryzae (rice blast fungus) MGG_08302 XP_003715775.1
Xenopus tropicalis (tropical clawed frog) fcf1 NP_001004999.1
Neurospora crassa NCU04159 XP_961315.1
Homo sapiens (human) FCF1 NP_057046.1
FCF1 XP_001088448.1
Bos taurus (cattle) FCF1 NP_001032529.1
Mus musculus (house mouse) Fcf1 NP_082908.2
Rattus norvegicus (Norway rat) Fcf1 NP_001037700.1

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following fcf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the fcf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa24369 NM_001004999.1
Latest version!		 Xenopus tropicalis FCF1, rRNA-processing protein (fcf1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00

ORF Online Only Promotion

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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa24369
Clone ID Related Accession (Same CDS sequence) NM_001004999.1
Accession Version NM_001004999.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 594bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-21
Organism Xenopus tropicalis(tropical clawed frog)
Product rRNA-processing protein FCF1 homolog
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075594.1. ##Evidence-Data-START## Transcript exon combination :: BC075594.1, CR413941.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGAAAGC AGAAAAAAAC GAAGAAATAT GCAGTAATGA AGAAGAGGAT TAGCCTTAAA 
GACCAACGCA TCAAGGAGAA AGATAGAGCA AAAATTCAGC CGAAAAAGGA AGACTCAAGT 
GCCATCAAAG AAAGAGAAGT ACCTCAGGTC CCGTCATGTC TTTTCTTCCA ATATAATACC 
AACTTGGGGC CACCCTACTA CATTCTGGTG GATACCAATT TCATCAACTT TTCCATCAAA 
GCAAAACTGG ACCTAGTGCA ATCTATGATG GACTGCCTTT ATGCTAAATG TGTCCCCTGT 
ATAACAGACT GTGTGATGGC TGAATTGGAG AAACTGGGAC AAAAATACAG AGTGGCTTTG 
AGGATTGCAA AGGACCCATC CTTTGAGCGA CTTCCTTGCT CTCATCCTGG AACCTATGCA 
GATGACTGCC TTGTACAAAG AGTTACTCAG CATAAGTGCT ATATTGTGGC TACAGTGGAC 
AGAGACCTGA AAAGAAGAAT CCGTAAAATC CCTGGTGTTC CCATCATGTA CATTTCAAAC 
CACAGATATA ATATTGAACG AATGCCAGAT GACTATGGAG CTCCACGTTT TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001004999.1
CDS78..671
Translation

Target ORF information:

RefSeq Version NM_001004999.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis FCF1, rRNA-processing protein (fcf1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001004999.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGAAAGC AGAAAAAAAC GAAGAAATAT GCAGTAATGA AGAAGAGGAT TAGCCTTAAA 
GACCAACGCA TCAAGGAGAA AGATAGAGCA AAAATTCAGC CGAAAAAGGA AGACTCAAGT 
GCCATCAAAG AAAGAGAAGT ACCTCAGGTC CCGTCATGTC TTTTCTTCCA ATATAATACC 
AACTTGGGGC CACCCTACTA CATTCTGGTG GATACCAATT TCATCAACTT TTCCATCAAA 
GCAAAACTGG ACCTAGTGCA ATCTATGATG GACTGCCTTT ATGCTAAATG TGTCCCCTGT 
ATAACAGACT GTGTGATGGC TGAATTGGAG AAACTGGGAC AAAAATACAG AGTGGCTTTG 
AGGATTGCAA AGGACCCATC CTTTGAGCGA CTTCCTTGCT CTCATCCTGG AACCTATGCA 
GATGACTGCC TTGTACAAAG AGTTACTCAG CATAAGTGCT ATATTGTGGC TACAGTGGAC 
AGAGACCTGA AAAGAAGAAT CCGTAAAATC CCTGGTGTTC CCATCATGTA CATTTCAAAC 
CACAGATATA ATATTGAACG AATGCCAGAT GACTATGGAG CTCCACGTTT TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P