Gene Symbol |
chmp2a |
Entrez Gene ID |
448496 |
Full Name |
charged multivesicular body protein 2A |
Synonyms |
bc-2,bc2,chmp2,vps2,vps2a |
General protein information |
- Preferred Names
charged multivesicular body protein 2A
Names
charged multivesicular body protein 2a chromatin modifying protein 2A chromatin-modifying protein 2a
|
Gene Type |
protein-coding |
Organism |
Xenopus tropicalis(tropical clawed frog) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_012966412.3 |
XP_012821866.1 |
charged multivesicular body protein 2a isoform X1 |
NM_001005008.1 |
NP_001005008.1 |
charged multivesicular body protein 2a |
XM_012966412.2 |
XP_012821866.1 |
charged multivesicular body protein 2a isoform X1 |
Xenopus tropicalis (tropical clawed frog) |
chmp2a |
NP_001005008.1 |
Homo sapiens (human) |
CHMP2A |
NP_940818.1 |
Canis lupus familiaris (dog) |
CHMP2A |
XP_850536.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP001285 |
XP_321862.3 |
Caenorhabditis elegans (roundworm) |
vps-2 |
NP_496717.1 |
Schizosaccharomyces pombe (fission yeast) |
did4 |
NP_593871.3 |
Oryza sativa (rice) |
Os07g0236800 |
NP_001059248.1 |
Bos taurus (cattle) |
CHMP2A |
NP_001029722.1 |
Mus musculus (house mouse) |
Chmp2a |
NP_081161.1 |
Rattus norvegicus (Norway rat) |
Chmp2a |
NP_001102376.1 |
Danio rerio (zebrafish) |
bc2 |
NP_998682.1 |
Neurospora crassa |
NCU00435 |
XP_956699.1 |
Pan troglodytes (chimpanzee) |
CHMP2A |
XP_003316813.1 |
|
CHMP2A |
XP_001099219.1 |
Gallus gallus (chicken) |
CHMP2A |
NP_001074361.1 |
Drosophila melanogaster (fruit fly) |
vps2 |
NP_651455.1 |
Magnaporthe oryzae (rice blast fungus) |
MGG_05208 |
XP_003712753.1 |
Saccharomyces cerevisiae (baker's yeast) |
DID4 |
NP_012924.2 |
Kluyveromyces lactis |
KLLA0B13343g |
XP_452125.1 |
Eremothecium gossypii |
AGOS_ABR002C |
NP_982948.1 |
Arabidopsis thaliana (thale cress) |
VPS2.1 |
NP_565336.1 |
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following chmp2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the chmp2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OXa00442 |
Clone ID Related Accession (Same CDS sequence) |
XM_012966412.3
, NM_001005008.1
, XM_012966412.2
|
Accession Version |
NM_001005008.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 663bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-25 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
charged multivesicular body protein 2a |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076657.1.
##Evidence-Data-START##
Transcript exon combination :: BC076657.1, DT390548.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGAGTTCC TGTTTGGACG ACGCAAGACC CCAGAAGAGA TGCTGAGGCA AAATCAGCGA GCTCTCAACA AGGCTATGAG AGAAATGGAT CGGGAGAGAC AGAAACTAGA GCAACAAGAG AAGAAAATAA TTGCGGATAT TAAAAAAATG GCAAAACAAG GACAAATGGA TGCAGTGAAA ATCATGGCAA AAGATCTCGT ACGCACTCGT CGTTATGTAA AGAAATTTAT CATGATGCGG GCAAACATCC AGGCGGTTTC ACTTAAAATT CAAACACTAA AGTCCAACAA TTCTATGGCT CAAGCTATGA AAGGAGTAAC GAAAGCCATG GCCACAATGA ACAGACAGCT AAAGCTTCCC CAGATACAGA AAATAATGAT GGAGTTTGAA AAGCAATCAG AAATTATGGA CATGAAAGAA GAAATGATGA ATGATGCCAT TGATGATGCC ATGGGTGATG AAGATGATGA GGAGGAAAGC GATGCTGTTG TATCTCAGGT CCTGGATGAG CTGGGCTTAA CTCTGACCGA TGAGCTGTCT AACCTCCCAT CAACAGGGGG CTCCCTCAGT GTGGCTGGAG CAAAGAAAGG CGAACCCTCA GCGGCCTTGG CCGATGCAGA TGCAGATTTA GAAGAGCGGC TGAACAACCT GCGACGGGAC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001005008.1 |
CDS | 86..748 |
Translation | |
Target ORF information:
RefSeq Version | NM_001005008.1 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis charged multivesicular body protein 2A (chmp2a), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001005008.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGAGTTCC TGTTTGGACG ACGCAAGACC CCAGAAGAGA TGCTGAGGCA AAATCAGCGA GCTCTCAACA AGGCTATGAG AGAAATGGAT CGGGAGAGAC AGAAACTAGA GCAACAAGAG AAGAAAATAA TTGCGGATAT TAAAAAAATG GCAAAACAAG GACAAATGGA TGCAGTGAAA ATCATGGCAA AAGATCTCGT ACGCACTCGT CGTTATGTAA AGAAATTTAT CATGATGCGG GCAAACATCC AGGCGGTTTC ACTTAAAATT CAAACACTAA AGTCCAACAA TTCTATGGCT CAAGCTATGA AAGGAGTAAC GAAAGCCATG GCCACAATGA ACAGACAGCT AAAGCTTCCC CAGATACAGA AAATAATGAT GGAGTTTGAA AAGCAATCAG AAATTATGGA CATGAAAGAA GAAATGATGA ATGATGCCAT TGATGATGCC ATGGGTGATG AAGATGATGA GGAGGAAAGC GATGCTGTTG TATCTCAGGT CCTGGATGAG CTGGGCTTAA CTCTGACCGA TGAGCTGTCT AACCTCCCAT CAACAGGGGG CTCCCTCAGT GTGGCTGGAG CAAAGAAAGG CGAACCCTCA GCGGCCTTGG CCGATGCAGA TGCAGATTTA GAAGAGCGGC TGAACAACCT GCGACGGGAC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa00442 |
Clone ID Related Accession (Same CDS sequence) |
XM_012966412.3
, NM_001005008.1
, XM_012966412.2
|
Accession Version |
XM_012966412.2 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 663bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-09-07 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
charged multivesicular body protein 2a isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030683.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Sep 8, 2016 this sequence version replaced XM_012966412.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Xenopus tropicalis Annotation Release 103
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGAGTTCC TGTTTGGACG ACGCAAGACC CCAGAAGAGA TGCTGAGGCA AAATCAGCGA GCTCTCAACA AGGCTATGAG AGAAATGGAT CGGGAGAGAC AGAAACTAGA GCAACAAGAG AAGAAAATAA TTGCGGATAT TAAAAAAATG GCAAAACAAG GACAAATGGA TGCAGTGAAA ATCATGGCAA AAGATCTCGT ACGCACTCGT CGTTATGTAA AGAAATTTAT CATGATGCGG GCAAACATCC AGGCGGTTTC ACTTAAAATT CAAACACTAA AGTCCAACAA TTCTATGGCT CAAGCTATGA AAGGAGTAAC GAAAGCCATG GCCACAATGA ACAGACAGCT AAAGCTTCCC CAGATACAGA AAATAATGAT GGAGTTTGAA AAGCAATCAG AAATTATGGA CATGAAAGAA GAAATGATGA ATGATGCCAT TGATGATGCC ATGGGTGATG AAGATGATGA GGAGGAAAGC GATGCTGTTG TATCTCAGGT CCTGGATGAG CTGGGCTTAA CTCTGACCGA TGAGCTGTCT AACCTCCCAT CAACAGGGGG CTCCCTCAGT GTGGCTGGAG CAAAGAAAGG CGAACCCTCA GCGGCCTTGG CCGATGCAGA TGCAGATTTA GAAGAGCGGC TGAACAACCT GCGACGGGAC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_012821866.1 |
CDS | 89..751 |
Translation | |
Target ORF information:
RefSeq Version | XM_012966412.2 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis charged multivesicular body protein 2A (chmp2a), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_012966412.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGAGTTCC TGTTTGGACG ACGCAAGACC CCAGAAGAGA TGCTGAGGCA AAATCAGCGA GCTCTCAACA AGGCTATGAG AGAAATGGAT CGGGAGAGAC AGAAACTAGA GCAACAAGAG AAGAAAATAA TTGCGGATAT TAAAAAAATG GCAAAACAAG GACAAATGGA TGCAGTGAAA ATCATGGCAA AAGATCTCGT ACGCACTCGT CGTTATGTAA AGAAATTTAT CATGATGCGG GCAAACATCC AGGCGGTTTC ACTTAAAATT CAAACACTAA AGTCCAACAA TTCTATGGCT CAAGCTATGA AAGGAGTAAC GAAAGCCATG GCCACAATGA ACAGACAGCT AAAGCTTCCC CAGATACAGA AAATAATGAT GGAGTTTGAA AAGCAATCAG AAATTATGGA CATGAAAGAA GAAATGATGA ATGATGCCAT TGATGATGCC ATGGGTGATG AAGATGATGA GGAGGAAAGC GATGCTGTTG TATCTCAGGT CCTGGATGAG CTGGGCTTAA CTCTGACCGA TGAGCTGTCT AACCTCCCAT CAACAGGGGG CTCCCTCAGT GTGGCTGGAG CAAAGAAAGG CGAACCCTCA GCGGCCTTGG CCGATGCAGA TGCAGATTTA GAAGAGCGGC TGAACAACCT GCGACGGGAC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa00442 |
Clone ID Related Accession (Same CDS sequence) |
XM_012966412.3
, NM_001005008.1
, XM_012966412.2
|
Accession Version |
XM_012966412.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 663bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-17 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
charged multivesicular body protein 2a isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030683.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Dec 18, 2019 this sequence version replaced XM_012966412.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Xenopus tropicalis Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGAGTTCC TGTTTGGACG ACGCAAGACC CCAGAAGAGA TGCTGAGGCA AAATCAGCGA GCTCTCAACA AGGCTATGAG AGAAATGGAT CGGGAGAGAC AGAAACTAGA GCAACAAGAG AAGAAAATAA TTGCGGATAT TAAAAAAATG GCAAAACAAG GACAAATGGA TGCAGTGAAA ATCATGGCAA AAGATCTCGT ACGCACTCGT CGTTATGTAA AGAAATTTAT CATGATGCGG GCAAACATCC AGGCGGTTTC ACTTAAAATT CAAACACTAA AGTCCAACAA TTCTATGGCT CAAGCTATGA AAGGAGTAAC GAAAGCCATG GCCACAATGA ACAGACAGCT AAAGCTTCCC CAGATACAGA AAATAATGAT GGAGTTTGAA AAGCAATCAG AAATTATGGA CATGAAAGAA GAAATGATGA ATGATGCCAT TGATGATGCC ATGGGTGATG AAGATGATGA GGAGGAAAGC GATGCTGTTG TATCTCAGGT CCTGGATGAG CTGGGCTTAA CTCTGACCGA TGAGCTGTCT AACCTCCCAT CAACAGGGGG CTCCCTCAGT GTGGCTGGAG CAAAGAAAGG CGAACCCTCA GCGGCCTTGG CCGATGCAGA TGCAGATTTA GAAGAGCGGC TGAACAACCT GCGACGGGAC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_012821866.1 |
CDS | 63..725 |
Translation | |
Target ORF information:
RefSeq Version | XM_012966412.3 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis charged multivesicular body protein 2A (chmp2a), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_012966412.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGAGTTCC TGTTTGGACG ACGCAAGACC CCAGAAGAGA TGCTGAGGCA AAATCAGCGA GCTCTCAACA AGGCTATGAG AGAAATGGAT CGGGAGAGAC AGAAACTAGA GCAACAAGAG AAGAAAATAA TTGCGGATAT TAAAAAAATG GCAAAACAAG GACAAATGGA TGCAGTGAAA ATCATGGCAA AAGATCTCGT ACGCACTCGT CGTTATGTAA AGAAATTTAT CATGATGCGG GCAAACATCC AGGCGGTTTC ACTTAAAATT CAAACACTAA AGTCCAACAA TTCTATGGCT CAAGCTATGA AAGGAGTAAC GAAAGCCATG GCCACAATGA ACAGACAGCT AAAGCTTCCC CAGATACAGA AAATAATGAT GGAGTTTGAA AAGCAATCAG AAATTATGGA CATGAAAGAA GAAATGATGA ATGATGCCAT TGATGATGCC ATGGGTGATG AAGATGATGA GGAGGAAAGC GATGCTGTTG TATCTCAGGT CCTGGATGAG CTGGGCTTAA CTCTGACCGA TGAGCTGTCT AACCTCCCAT CAACAGGGGG CTCCCTCAGT GTGGCTGGAG CAAAGAAAGG CGAACCCTCA GCGGCCTTGG CCGATGCAGA TGCAGATTTA GAAGAGCGGC TGAACAACCT GCGACGGGAC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.