Gene Symbol | fam3d |
Entrez Gene ID | 493229 |
Full Name | family with sequence similarity 3 member D |
Synonyms | oit1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » fam3d cDNA ORF clone
Gene Symbol | fam3d |
Entrez Gene ID | 493229 |
Full Name | family with sequence similarity 3 member D |
Synonyms | oit1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_018089361.2 | XP_017944850.1 | protein FAM3D isoform X1 |
NM_001007502.1 | NP_001007503.1 | protein FAM3D |
XM_012960902.2 | XP_012816356.1 | protein FAM3D isoform X3 |
XM_012960901.3 | XP_012816355.1 | protein FAM3D isoform X2 |
XM_012960901.2 | XP_012816355.1 | protein FAM3D isoform X2 |
XM_018089361.1 | XP_017944850.1 | protein FAM3D isoform X1 |
XM_012960902.3 | XP_012816356.1 | protein FAM3D isoform X3 |
LOC705756 | XP_001094099.2 | |
Canis lupus familiaris (dog) | FAM3D | XP_003639818.1 |
Mus musculus (house mouse) | Oit1 | NP_666162.1 |
Gallus gallus (chicken) | FAM3D | XP_004944700.1 |
Xenopus tropicalis (tropical clawed frog) | fam3d | NP_001007503.1 |
Homo sapiens (human) | FAM3D | NP_620160.1 |
Pan troglodytes (chimpanzee) | FAM3D | XP_001174358.1 |
Bos taurus (cattle) | FAM3D | XP_002697035.1 |
Rattus norvegicus (Norway rat) | Fam3d | NP_001099497.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100496780 | XP_004914216.1 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following fam3d gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the fam3d cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa25274 | |
Clone ID Related Accession (Same CDS sequence) | XM_018089361.2 , NM_001007502.1 , XM_018089361.1 | |
Accession Version | NM_001007502.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-22 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protein FAM3D | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079939.1. ##Evidence-Data-START## Transcript exon combination :: BC079939.1, CR760189.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028291, SAMD00028292 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001007503.1 |
CDS | 148..828 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001007502.1 |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa25274 | |
Clone ID Related Accession (Same CDS sequence) | XM_018089361.2 , NM_001007502.1 , XM_018089361.1 | |
Accession Version | XM_018089361.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protein FAM3D isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016683370.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017944850.1 |
CDS | 168..848 |
Translation |
Target ORF information:
Target ORF information:
|
XM_018089361.1 |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26813 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960901.3 , XM_012960901.2 | |
Accession Version | XM_012960901.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protein FAM3D isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016683370.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012960901.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012816355.1 |
CDS | 270..926 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960901.2 |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26814 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960902.2 , XM_012960902.3 | |
Accession Version | XM_012960902.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protein FAM3D isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016683370.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012960902.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATTCTA ATCGGGACAA TATGAAGAGC CTGAGGAGTA TATTTGATAA TAAAGCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012816356.1 |
CDS | 388..993 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960902.2 |
1 | ATGTATTCTA ATCGGGACAA TATGAAGAGC CTGAGGAGTA TATTTGATAA TAAAGCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa25274 | |
Clone ID Related Accession (Same CDS sequence) | XM_018089361.2 , NM_001007502.1 , XM_018089361.1 | |
Accession Version | XM_018089361.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protein FAM3D isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030680.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_018089361.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017944850.1 |
CDS | 166..846 |
Translation |
Target ORF information:
Target ORF information:
|
XM_018089361.2 |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26813 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960901.3 , XM_012960901.2 | |
Accession Version | XM_012960901.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protein FAM3D isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030680.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960901.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012816355.1 |
CDS | 256..912 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960901.3 |
1 | ATGCGGTGTG CGGCTATTCT ACGGGTCATA GTGATTCTAC TTACCCTGAT CACCACATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26814 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960902.2 , XM_012960902.3 | |
Accession Version | XM_012960902.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | protein FAM3D isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030680.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960902.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATTCTA ATCGGGACAA TATGAAGAGC CTGAGGAGTA TATTTGATAA TAAAGCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012816356.1 |
CDS | 373..978 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960902.3 |
1 | ATGTATTCTA ATCGGGACAA TATGAAGAGC CTGAGGAGTA TATTTGATAA TAAAGCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |