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ptafr cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol ptafr
Entrez Gene ID 493365
Full Name platelet activating factor receptor
Synonyms pafr
General protein information
Preferred Names

platelet activating factor receptor

Names

platelet-activating factor receptor
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012956811.2 XP_012812265.1 platelet-activating factor receptor isoform X1
XM_018091192.1 XP_017946681.1 platelet-activating factor receptor isoform X2
NM_001008002.1 NP_001008003.1 platelet-activating factor receptor
XM_012956812.2 XP_012812266.1 platelet-activating factor receptor isoform X1
XM_018091192.2 XP_017946681.1 platelet-activating factor receptor isoform X2
XM_012956811.3 XP_012812265.1 platelet-activating factor receptor isoform X1

Pathways from BioSystems


Homologies


PTAFR XP_001112942.2
Canis lupus familiaris (dog) PTAFR XP_005617766.1
Rattus norvegicus (Norway rat) Ptafr NP_445773.1
Xenopus tropicalis (tropical clawed frog) ptafr NP_001008003.1
Homo sapiens (human) PTAFR NP_000943.1
Pan troglodytes (chimpanzee) PTAFR XP_001151906.1
Bos taurus (cattle) PTAFR NP_001035628.1
Mus musculus (house mouse) Ptafr NP_001074680.1
Danio rerio (zebrafish) LOC100002627 XP_001342372.1
Gallus gallus (chicken) PTAFR XP_004947758.1

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ptafr gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ptafr cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa21553 NM_001008002.1
Latest version!		 Xenopus tropicalis platelet activating factor receptor (ptafr), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
OXa26907 XM_012956812.2
Latest version!		 Xenopus tropicalis platelet-activating factor receptor (ptafr), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
OXa26907 XM_012956811.3
Latest version!		 Xenopus tropicalis platelet activating factor receptor (ptafr), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00
OXa26908 XM_018091192.2
Latest version!		 Xenopus tropicalis platelet activating factor receptor (ptafr), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00
View Old Accession Versions >>
OXa26908 XM_018091192.1 Xenopus tropicalis platelet-activating factor receptor (ptafr), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
OXa26907 XM_012956811.2 Xenopus tropicalis platelet-activating factor receptor (ptafr), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa21553
Clone ID Related Accession (Same CDS sequence) NM_001008002.1
Accession Version NM_001008002.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1062bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-22
Organism Xenopus tropicalis(tropical clawed frog)
Product platelet-activating factor receptor
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC080881.1. ##Evidence-Data-START## Transcript exon combination :: BC080881.1, CF591606.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028291, SAMD00028292 [ECO:0000348] ##Evidence-Data-END## 

1
61
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541
601
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721
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841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATAATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001008003.1
CDS164..1225
Translation

Target ORF information:

RefSeq Version NM_001008002.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis platelet activating factor receptor (ptafr), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001008002.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATAATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa26907
Clone ID Related Accession (Same CDS sequence) XM_012956811.2 , XM_012956812.2 , XM_012956811.3
Accession Version XM_012956811.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1062bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product platelet-activating factor receptor isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012956811.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012812265.1
CDS348..1409
Translation

Target ORF information:

RefSeq Version XM_012956811.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis platelet-activating factor receptor (ptafr), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012956811.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa26907
Clone ID Related Accession (Same CDS sequence) XM_012956811.2 , XM_012956812.2 , XM_012956811.3
Accession Version XM_012956812.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1062bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product platelet-activating factor receptor isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012956812.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012812266.1
CDS189..1250
Translation

Target ORF information:

RefSeq Version XM_012956812.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis platelet-activating factor receptor (ptafr), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012956812.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa26908
Clone ID Related Accession (Same CDS sequence) XM_018091192.1 , XM_018091192.2
Accession Version XM_018091192.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1032bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product platelet-activating factor receptor isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGAAC AACCATTCCA CCTGTGAACC AAGATCCTCA ACTAATGAAT 
TTGGCAACCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017946681.1
CDS943..1974
Translation

Target ORF information:

RefSeq Version XM_018091192.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis platelet-activating factor receptor (ptafr), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_018091192.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGAAC AACCATTCCA CCTGTGAACC AAGATCCTCA ACTAATGAAT 
TTGGCAACCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa26907
Clone ID Related Accession (Same CDS sequence) XM_012956811.2 , XM_012956812.2 , XM_012956811.3
Accession Version XM_012956811.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1062bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product platelet-activating factor receptor isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012956811.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012812265.1
CDS273..1334
Translation

Target ORF information:

RefSeq Version XM_012956811.3
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis platelet activating factor receptor (ptafr), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012956811.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGTAA GTTGTCTAGA AATACCACTG ACACCAACCT AGAGACCACA 
TTGCCATTCA AAGAAAAGCT AGACAACATT ACCAGTGTAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa26908
Clone ID Related Accession (Same CDS sequence) XM_018091192.1 , XM_018091192.2
Accession Version XM_018091192.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1032bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product platelet-activating factor receptor isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_018091192.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGAAC AACCATTCCA CCTGTGAACC AAGATCCTCA ACTAATGAAT 
TTGGCAACCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017946681.1
CDS961..1992
Translation

Target ORF information:

RefSeq Version XM_018091192.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis platelet activating factor receptor (ptafr), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_018091192.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTCTTCAG AGACAACTAC AAACTACCTA AGTAAAACAG ATCCTTGTAA TGTGGATTCC 
ACGTTCAGAT ACTCCCTCTT CACCGTGACC TATAGCATCA TTTTTGTCTT CGGATTCATT 
GCCAACTGTT ATGTCTTGTG GATATTTGGC AAAGTTTACC CTGCCAAGAA TCTCAGTGAA 
ATTAAAATTT TTATGATCAA TTTGACAGTT GCAGACTTGC TGTTTTTAGT AACGCTTCCA 
CTCTGGATTG TTTATTACCA TTACGGAGGA GACTGGTTTA TGCCTTCCTT TCTGTGCAAT 
GTGGCAGGCT GCTTTTTTTT CCTCAACACA TATTGTTCAG TGGCATTTCT AGGAGTCATA 
AGCTATAACC GATTCCAGGC TGTAACACGT CCAGTAGAAA CTGCTCAGTC CACAGCAAGA 
ATAAGAGGCA TCTGTATCTC AGCAGCTGTA TGGATCCTTT TGTTTGCCAG CTCACTGTAT 
TTTCTTATTT TTCCTGGCAC TAATGAAGTA AACATTAATG GTCAAAACTA CACCCGATGT 
TTTGAAGGAT ACAGCATTGA CAACAGGGAA CCAGTGGCTG TTATCCATTT TATTCTGGTT 
GGGGCATTTT TTGTTGTGTT TCTAATCATA TTAACCTGCA ATCTGGTGAT TGCCAGAACA 
TTACTTACCC AGCCAGTGAA GTCGAGGAAA AGTTCAGATA TGAAACATAG AGCTTTGTGG 
ATGGTGGTCA CTGTACTGGC TGTCTTTGTC ATATGTTTTG TACCCCACCA TATTGTAGAT 
GGTCCTTGGA CTCTGACAGT ATTGAGAATG TGGCATGAAA GAGATTGTGA GTTTCGCTTG 
ACACTGAACA ATGCGCATCA AATAACACTG TGCCTTATGA GCACCAACTG TATGCTGGAC 
CCTATCATCT ACTGTTTCCT CACAAAGAAG TTCAGGAAAC ATCTCAGTGA GCGAATTCAG 
AACATTAAAA GCAGCCGAAC AACCATTCCA CCTGTGAACC AAGATCCTCA ACTAATGAAT 
TTGGCAACCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P