Gene Symbol | ythdc1 |
Entrez Gene ID | 493483 |
Full Name | YTH domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » ythdc1 cDNA ORF clone
Gene Symbol | ythdc1 |
Entrez Gene ID | 493483 |
Full Name | YTH domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_012960472.1 | XP_012815926.1 | YTH domain-containing protein 1 isoform X4 |
XM_012960472.2 | XP_012815926.1 | YTH domain-containing protein 1 isoform X4 |
NM_001008120.1 | NP_001008121.1 | YTH domain-containing protein 1 |
XM_012960461.1 | XP_012815915.1 | YTH domain-containing protein 1 isoform X2 |
XM_012960461.2 | XP_012815915.1 | YTH domain-containing protein 1 isoform X2 |
XM_012960459.1 | XP_012815913.1 | YTH domain-containing protein 1 isoform X1 |
XM_012960466.1 | XP_012815920.1 | YTH domain-containing protein 1 isoform X3 |
XM_012960459.2 | XP_012815913.1 | YTH domain-containing protein 1 isoform X1 |
XM_012960466.2 | XP_012815920.1 | YTH domain-containing protein 1 isoform X3 |
Mus musculus (house mouse) | Ythdc1 | NP_808348.2 |
Homo sapiens (human) | YTHDC1 | NP_001026902.1 |
YTHDC1 | XP_001098270.2 | |
Bos taurus (cattle) | YTHDC1 | NP_001039985.1 |
Danio rerio (zebrafish) | ythdc1 | NP_001007411.1 |
Pan troglodytes (chimpanzee) | YTHDC1 | XP_517262.2 |
Xenopus tropicalis (tropical clawed frog) | ythdc1 | NP_001008121.1 |
Canis lupus familiaris (dog) | YTHDC1 | XP_005628316.1 |
Rattus norvegicus (Norway rat) | Ythdc1 | NP_596914.1 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ythdc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ythdc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa26966 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960459.1 | |
Accession Version | XM_012960459.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2112bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815913.1 |
CDS | 460..2571 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960459.1 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26967 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960461.1 | |
Accession Version | XM_012960461.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2058bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815915.1 |
CDS | 460..2517 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960461.1 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26968 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960466.1 | |
Accession Version | XM_012960466.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2049bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815920.1 |
CDS | 460..2508 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960466.1 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26969 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960472.1 | |
Accession Version | XM_012960472.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1968bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815926.1 |
CDS | 460..2427 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960472.1 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa23865 | |
Clone ID Related Accession (Same CDS sequence) | NM_001008120.1 | |
Accession Version | NM_001008120.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2022bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081325.1. ##Evidence-Data-START## Transcript exon combination :: BC081325.1, CT030071.2 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001008121.1 |
CDS | 233..2254 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001008120.1 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa47824 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960459.2 | |
Accession Version | XM_012960459.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2112bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960459.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815913.1 |
CDS | 460..2571 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960459.2 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa47825 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960461.2 | |
Accession Version | XM_012960461.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2058bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960461.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815915.1 |
CDS | 460..2517 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960461.2 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa47826 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960466.2 | |
Accession Version | XM_012960466.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2049bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960466.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815920.1 |
CDS | 460..2508 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960466.2 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa47827 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960472.2 | |
Accession Version | XM_012960472.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1968bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | YTH domain-containing protein 1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960472.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815926.1 |
CDS | 460..2427 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012960472.2 |
1 | ATGGAGGCGG AGCGAGGGGA ACAGAGTAAA GAAGGTGAAG TGAATGTTTT GGATGATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |