Gene Symbol |
farsb |
Entrez Gene ID |
548428 |
Full Name |
phenylalanyl-tRNA synthetase beta subunit |
General protein information |
- Preferred Names
phenylalanyl-tRNA synthetase beta subunit
Names
phenylalanine--tRNA ligase beta subunit phenylalanine tRNA synthetase like beta subunit
|
Gene Type |
protein-coding |
Organism |
Xenopus tropicalis(tropical clawed frog) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_001015711.2 |
NP_001015711.1 |
phenylalanine--tRNA ligase beta subunit |
XM_031901685.1 |
XP_031757545.1 |
phenylalanine--tRNA ligase beta subunit isoform X1 |
Danio rerio (zebrafish) |
farsb |
NP_001007769.1 |
|
FARSB |
XP_002808073.1 |
Drosophila melanogaster (fruit fly) |
CG5706 |
NP_651237.1 |
Arabidopsis thaliana (thale cress) |
AT1G72550 |
NP_177399.1 |
Oryza sativa (rice) |
Os05g0558900 |
NP_001056297.1 |
Canis lupus familiaris (dog) |
FARSB |
XP_536085.2 |
Pan troglodytes (chimpanzee) |
FARSB |
NP_001233467.1 |
Gallus gallus (chicken) |
FARSB |
NP_001006543.1 |
Caenorhabditis elegans (roundworm) |
fars-3 |
NP_495785.1 |
Saccharomyces cerevisiae (baker's yeast) |
FRS1 |
NP_013161.1 |
Kluyveromyces lactis |
KLLA0D05137g |
XP_453289.1 |
Eremothecium gossypii |
AGOS_ACR219W |
NP_983621.2 |
Schizosaccharomyces pombe (fission yeast) |
frs1 |
NP_594442.1 |
Homo sapiens (human) |
FARSB |
NP_005678.3 |
Bos taurus (cattle) |
FARSB |
NP_001098491.1 |
Mus musculus (house mouse) |
Farsb |
NP_001265004.1 |
Rattus norvegicus (Norway rat) |
Farsb |
NP_001004252.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP003517 |
XP_003436507.1 |
Magnaporthe oryzae (rice blast fungus) |
MGG_00876 |
XP_003718093.1 |
Neurospora crassa |
NCU08888 |
XP_958826.2 |
Xenopus tropicalis (tropical clawed frog) |
farsb |
NP_001015711.1 |
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following farsb gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the farsb cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OXa01589 |
Clone ID Related Accession (Same CDS sequence) |
NM_001015711.2
|
Accession Version |
NM_001015711.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1767bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-21 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
phenylalanine--tRNA ligase beta subunit |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR942340.2. On Mar 19, 2006 this sequence version replaced NM_001015711.1.
##Evidence-Data-START##
Transcript exon combination :: CR942340.2, BC089642.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGCCGACTG TCAGTGTAAA GAGGGATCTG CTGTACCACG CTTTGGGCCG CACTTACACT GATGAAGAAT TTGATGAACT CTGCTTTGAA TTTGGCCTAG AGTTGGATGA AATTACCTCA GAACGTGAGA TTATCAGCAA GGAGAAGGGT GATGTAAAGG CAGAAGGTGC CTCCGATGTT ATTCTATTTA AGATTGATGT ACCTGCCAAC CGCTATGACC TTCTGTGCAT AGAGGGGCTG GTGCGGGGGC TACAGGTCTT CAAAGAAAGG TTAGAAGCAC CAAGGTACAA GAGGATCACT CCATCAGATC AAGGGCTGCA GAGACTTTTC ATCACAGAGG AGACTGCTGT AGTTCGCCCC CATGCAGTGG CTGCAGTACT CCGGAACATT ACATTTACTC AGGAACGATA TGATAGTTTC ATTGATCTGC AGGAGAAGCT TCACCAGAAC ATCTGCAGGC GGAGGACTTT GGTGGCAATT GGCACACATG ACCTGGACAC TATCTCTGGC CCATTTGTAT ACACAGCTAA ACCACCTGCA AGTATTAAAT TTAAGGCCTT GAACCAAAGC AAGGAGTTAA CAGCCCCAGA GCTAATGGAC CTGTACAGAA CTGACAGCCA TATGAAGCAC TATCTGCACA TTGTTGAGGA TAAGCCTGTT TATCCAGTAA TCTATGACCG CAACGGAGTG CTGCTGTCCA TGCCGCCGAT CATCAATGGG GATCATTCAA GAATCACCTT AAATACTCGC AACGTATTCA TTGAATGCAC CGCAACTGAT TTGACAAAGG CCAAAATAGT CTTGGATATT ATGGTCACCA TGTTTAGTGA ATACTGTGCT GAACCATTCA CTGTAGAGGC AGCAGAAGTT ATTCAGCCAG ATGGATCGAC TTCTATTTAC CCAGAACTGG CGTACAGGAA GGAAGTGGTA CCTGCTGAGA AGATGAACTC TAAAATTGGA ATCAGTGAAA CACCCTCCAA CCTGGCAAAG CTTCTTACAC GCATGTGCCT AAAGTCTCAC GTGCTGGAAG ATGGGGAGCA GATAGAAATA GAGGTGCCCC CAACAAGAGC AGACATTATC CAAGCCTGTG ACATTGTGGA GGATGCTGCT GTTGCTTATG GGTTCAATAA CATCAAGATG GTTATTCCTA AAACTTACAC AATAGCCAAC CAGTTTCCAC TCAATAAACT CACTGAGTTA CTGCGCCAGG ACCTGGCTGC TGCTGGATTT ACAGAAGCCC TGACATTCGC TCTGTGCTCT GTAGATGATA TCTCTGATAA GCTCGGGATA CCAGTCTCTG CCACTAAAGC TGCACATATC TCCAACCCTA AAACAGCTGA ATTTCAGGTG GCTCGCACAA CTCTTCTCCC AGGCCTGTTG AAAACCATTG CAGCCAACCG TAAAATGCCC TTGCCTCTGA AGCTGTTTGA GATCTCTGAT GTGGTTGTAA AGGATCCCAC TAAAGATGTG GGTGCCAGAA ATTATCGACA TCTGTGTGCA GTTTACTACA ACAAGTACCC TGGATTTGAG GTGATACATG GCCTCCTGGA CCGAACCATG CAACTGCTGG CACTGTGCCC GGGGGAGACA GGGTACCAGA TCAAAGCAGC ACAAGATCCA GCCTTTTTTC CTGGTCGCTG TGCCGAGATC TTGGTTAATG AGCAGATTAT AGGCAAACTG GGTGTCCTGC ATCCTGATGT CGTCACTAAA TTCGACCTGA CCTTACCGTG CTCTGCGCTT GAGATCAACG TGGAGCCTTT CCTGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001015711.1 |
CDS | 243..2009 |
Translation | |
Target ORF information:
RefSeq Version | NM_001015711.2 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis phenylalanyl-tRNA synthetase subunit beta (farsb), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001015711.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGCCGACTG TCAGTGTAAA GAGGGATCTG CTGTACCACG CTTTGGGCCG CACTTACACT GATGAAGAAT TTGATGAACT CTGCTTTGAA TTTGGCCTAG AGTTGGATGA AATTACCTCA GAACGTGAGA TTATCAGCAA GGAGAAGGGT GATGTAAAGG CAGAAGGTGC CTCCGATGTT ATTCTATTTA AGATTGATGT ACCTGCCAAC CGCTATGACC TTCTGTGCAT AGAGGGGCTG GTGCGGGGGC TACAGGTCTT CAAAGAAAGG TTAGAAGCAC CAAGGTACAA GAGGATCACT CCATCAGATC AAGGGCTGCA GAGACTTTTC ATCACAGAGG AGACTGCTGT AGTTCGCCCC CATGCAGTGG CTGCAGTACT CCGGAACATT ACATTTACTC AGGAACGATA TGATAGTTTC ATTGATCTGC AGGAGAAGCT TCACCAGAAC ATCTGCAGGC GGAGGACTTT GGTGGCAATT GGCACACATG ACCTGGACAC TATCTCTGGC CCATTTGTAT ACACAGCTAA ACCACCTGCA AGTATTAAAT TTAAGGCCTT GAACCAAAGC AAGGAGTTAA CAGCCCCAGA GCTAATGGAC CTGTACAGAA CTGACAGCCA TATGAAGCAC TATCTGCACA TTGTTGAGGA TAAGCCTGTT TATCCAGTAA TCTATGACCG CAACGGAGTG CTGCTGTCCA TGCCGCCGAT CATCAATGGG GATCATTCAA GAATCACCTT AAATACTCGC AACGTATTCA TTGAATGCAC CGCAACTGAT TTGACAAAGG CCAAAATAGT CTTGGATATT ATGGTCACCA TGTTTAGTGA ATACTGTGCT GAACCATTCA CTGTAGAGGC AGCAGAAGTT ATTCAGCCAG ATGGATCGAC TTCTATTTAC CCAGAACTGG CGTACAGGAA GGAAGTGGTA CCTGCTGAGA AGATGAACTC TAAAATTGGA ATCAGTGAAA CACCCTCCAA CCTGGCAAAG CTTCTTACAC GCATGTGCCT AAAGTCTCAC GTGCTGGAAG ATGGGGAGCA GATAGAAATA GAGGTGCCCC CAACAAGAGC AGACATTATC CAAGCCTGTG ACATTGTGGA GGATGCTGCT GTTGCTTATG GGTTCAATAA CATCAAGATG GTTATTCCTA AAACTTACAC AATAGCCAAC CAGTTTCCAC TCAATAAACT CACTGAGTTA CTGCGCCAGG ACCTGGCTGC TGCTGGATTT ACAGAAGCCC TGACATTCGC TCTGTGCTCT GTAGATGATA TCTCTGATAA GCTCGGGATA CCAGTCTCTG CCACTAAAGC TGCACATATC TCCAACCCTA AAACAGCTGA ATTTCAGGTG GCTCGCACAA CTCTTCTCCC AGGCCTGTTG AAAACCATTG CAGCCAACCG TAAAATGCCC TTGCCTCTGA AGCTGTTTGA GATCTCTGAT GTGGTTGTAA AGGATCCCAC TAAAGATGTG GGTGCCAGAA ATTATCGACA TCTGTGTGCA GTTTACTACA ACAAGTACCC TGGATTTGAG GTGATACATG GCCTCCTGGA CCGAACCATG CAACTGCTGG CACTGTGCCC GGGGGAGACA GGGTACCAGA TCAAAGCAGC ACAAGATCCA GCCTTTTTTC CTGGTCGCTG TGCCGAGATC TTGGTTAATG AGCAGATTAT AGGCAAACTG GGTGTCCTGC ATCCTGATGT CGTCACTAAA TTCGACCTGA CCTTACCGTG CTCTGCGCTT GAGATCAACG TGGAGCCTTT CCTGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa58006 |
Clone ID Related Accession (Same CDS sequence) |
XM_031901685.1
|
Accession Version |
XM_031901685.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1818bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-17 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
phenylalanine--tRNA ligase beta subunit isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Xenopus tropicalis Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801
| ATGTACTCCA GGAAGCGTGG CATCCACACG ACCCAGAAGT GTTTGGCCCT AGAGAAAGCC ACCATCTCTA GTGAAGTCGG GGAGCAGGAA CCCCGTGACC AAGGATTTAC TGATGAAGAA TTTGATGAAC TCTGCTTTGA ATTTGGCCTA GAGTTGGATG AAATTACCTC AGAACGTGAG ATTATCAGCA AGGAGAAGGG TGATGTAAAG GCAGAAGGTG CCTCCGATGT TATTCTATTT AAGATTGATG TACCTGCCAA CCGCTATGAC CTTCTGTGCA TAGAGGGGCT GGTGCGGGGG CTACAGGTCT TCAAAGAAAG GTTAGAAGCA CCAAGGTACA AGAGGATCAC TCCATCAGAT CAAGGGCTGC AGAGACTTTT CATCACAGAG GAGACTGCTG TAGTTCGCCC CCATGCAGTG GCTGCAGTAC TCCGGAACAT TACATTTACT CAGGAACGAT ATGATAGTTT CATTGATCTG CAGGAGAAGC TTCACCAGAA CATCTGCAGG CGGAGGACTT TGGTGGCAAT TGGCACACAT GACCTGGACA CTATCTCTGG CCCATTTGTA TACACAGCTA AACCACCTGC AAGTATTAAA TTTAAGGCCT TGAACCAAAG CAAGGAGTTA ACAGCCCCAG AGCTAATGGA CCTGTACAGA ACTGACAGCC ATATGAAGCA CTATCTGCAC ATTGTTGAGG ATAAGCCTGT TTATCCAGTA ATCTATGACC GCAACGGAGT GCTGCTGTCC ATGCCGCCGA TCATCAATGG GGATCATTCA AGAATCACCT TAAATACTCG CAACGTATTC ATTGAATGCA CCGCAACTGA TTTGACAAAG GCCAAAATAG TCTTGGATAT TATGGTCACC ATGTTTAGTG AATACTGTGC TGAACCATTC ACTGTAGAGG CAGCAGAAGT TATTCAGCCA GATGGATCGA CTTCTATTTA CCCAGAACTG GCGTACAGGA AGGAAGTGGT ACCTGCTGAG AAGATGAACT CTAAAATTGG AATCAGTGAA ACACCCTCCA ACCTGGCAAA GCTTCTTACA CGCATGTGCC TAAAGTCTCA CGTGCTGGAA GATGGGGAGC AGATAGAAAT AGAGGTGCCC CCAACAAGAG CAGACATTAT CCAAGCCTGT GACATTGTGG AGGATGCTGC TGTTGCTTAT GGGTTCAATA ACATCAAGAT GGTTATTCCT AAAACTTACA CAATAGCCAA CCAGTTTCCA CTCAATAAAC TCACTGAGTT ACTGCGCCAG GACCTGGCTG CTGCTGGATT TACAGAAGCC CTGACATTCG CTCTGTGCTC TGTAGATGAT ATCTCTGATA AGCTCGGGAT ACCAGTCTCT GCCACTAAAG CTGCACATAT CTCCAACCCT AAAACAGCTG AATTTCAGGT GGCTCGCACA ACTCTTCTCC CAGGCCTGTT GAAAACCATT GCAGCCAACC GTAAAATGCC CTTGCCTCTG AAGCTGTTTG AGATCTCTGA TGTGGTTGTA AAGGATCCCA CTAAAGATGT GGGTGCCAGA AATTATCGAC ATCTGTGTGC AGTTTACTAC AACAAGTACC CTGGATTTGA GGTGATACAT GGCCTCCTGG ACCGAACCAT GCAACTGCTG GCACTGTGCC CGGGGGAGAC AGGGTACCAG ATCAAAGCAG CACAAGATCC AGCCTTTTTT CCTGGTCGCT GTGCCGAGAT CTTGGTTAAT GAGCAGATTA TAGGCAAACT GGGTGTCCTG CATCCTGATG TCGTCACTAA ATTCGACCTG ACCTTACCGT GCTCTGCGCT TGAGATCAAC GTGGAGCCTT TCCTGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_031757545.1 |
CDS | 16..1833 |
Translation | |
Target ORF information:
RefSeq Version | XM_031901685.1 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis phenylalanyl-tRNA synthetase subunit beta (farsb), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_031901685.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801
| ATGTACTCCA GGAAGCGTGG CATCCACACG ACCCAGAAGT GTTTGGCCCT AGAGAAAGCC ACCATCTCTA GTGAAGTCGG GGAGCAGGAA CCCCGTGACC AAGGATTTAC TGATGAAGAA TTTGATGAAC TCTGCTTTGA ATTTGGCCTA GAGTTGGATG AAATTACCTC AGAACGTGAG ATTATCAGCA AGGAGAAGGG TGATGTAAAG GCAGAAGGTG CCTCCGATGT TATTCTATTT AAGATTGATG TACCTGCCAA CCGCTATGAC CTTCTGTGCA TAGAGGGGCT GGTGCGGGGG CTACAGGTCT TCAAAGAAAG GTTAGAAGCA CCAAGGTACA AGAGGATCAC TCCATCAGAT CAAGGGCTGC AGAGACTTTT CATCACAGAG GAGACTGCTG TAGTTCGCCC CCATGCAGTG GCTGCAGTAC TCCGGAACAT TACATTTACT CAGGAACGAT ATGATAGTTT CATTGATCTG CAGGAGAAGC TTCACCAGAA CATCTGCAGG CGGAGGACTT TGGTGGCAAT TGGCACACAT GACCTGGACA CTATCTCTGG CCCATTTGTA TACACAGCTA AACCACCTGC AAGTATTAAA TTTAAGGCCT TGAACCAAAG CAAGGAGTTA ACAGCCCCAG AGCTAATGGA CCTGTACAGA ACTGACAGCC ATATGAAGCA CTATCTGCAC ATTGTTGAGG ATAAGCCTGT TTATCCAGTA ATCTATGACC GCAACGGAGT GCTGCTGTCC ATGCCGCCGA TCATCAATGG GGATCATTCA AGAATCACCT TAAATACTCG CAACGTATTC ATTGAATGCA CCGCAACTGA TTTGACAAAG GCCAAAATAG TCTTGGATAT TATGGTCACC ATGTTTAGTG AATACTGTGC TGAACCATTC ACTGTAGAGG CAGCAGAAGT TATTCAGCCA GATGGATCGA CTTCTATTTA CCCAGAACTG GCGTACAGGA AGGAAGTGGT ACCTGCTGAG AAGATGAACT CTAAAATTGG AATCAGTGAA ACACCCTCCA ACCTGGCAAA GCTTCTTACA CGCATGTGCC TAAAGTCTCA CGTGCTGGAA GATGGGGAGC AGATAGAAAT AGAGGTGCCC CCAACAAGAG CAGACATTAT CCAAGCCTGT GACATTGTGG AGGATGCTGC TGTTGCTTAT GGGTTCAATA ACATCAAGAT GGTTATTCCT AAAACTTACA CAATAGCCAA CCAGTTTCCA CTCAATAAAC TCACTGAGTT ACTGCGCCAG GACCTGGCTG CTGCTGGATT TACAGAAGCC CTGACATTCG CTCTGTGCTC TGTAGATGAT ATCTCTGATA AGCTCGGGAT ACCAGTCTCT GCCACTAAAG CTGCACATAT CTCCAACCCT AAAACAGCTG AATTTCAGGT GGCTCGCACA ACTCTTCTCC CAGGCCTGTT GAAAACCATT GCAGCCAACC GTAAAATGCC CTTGCCTCTG AAGCTGTTTG AGATCTCTGA TGTGGTTGTA AAGGATCCCA CTAAAGATGT GGGTGCCAGA AATTATCGAC ATCTGTGTGC AGTTTACTAC AACAAGTACC CTGGATTTGA GGTGATACAT GGCCTCCTGG ACCGAACCAT GCAACTGCTG GCACTGTGCC CGGGGGAGAC AGGGTACCAG ATCAAAGCAG CACAAGATCC AGCCTTTTTT CCTGGTCGCT GTGCCGAGAT CTTGGTTAAT GAGCAGATTA TAGGCAAACT GGGTGTCCTG CATCCTGATG TCGTCACTAA ATTCGACCTG ACCTTACCGT GCTCTGCGCT TGAGATCAAC GTGGAGCCTT TCCTGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.