Gene Symbol |
mmadhc |
Entrez Gene ID |
549485 |
Full Name |
methylmalonic aciduria and homocystinuria, cblD type |
General protein information |
- Preferred Names
methylmalonic aciduria and homocystinuria, cblD type
Names
methylmalonic aciduria and homocystinuria type D protein, mitochondrial methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
|
Gene Type |
protein-coding |
Organism |
Xenopus tropicalis(tropical clawed frog) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_001016731.2 |
NP_001016731.1 |
methylmalonic aciduria and homocystinuria type D protein, mitochondrial |
XM_018097111.2 |
XP_017952600.2 |
methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X1 |
XM_018097111.1 |
XP_017952600.1 |
methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X1 |
Homo sapiens (human) |
MMADHC |
NP_056517.1 |
Bos taurus (cattle) |
MMADHC |
NP_001029713.1 |
Gallus gallus (chicken) |
MMADHC |
NP_001008477.1 |
Caenorhabditis elegans (roundworm) |
Y76A2B.5 |
NP_499801.1 |
|
MMADHC |
XP_001082223.1 |
Mus musculus (house mouse) |
Mmadhc |
NP_598600.1 |
Rattus norvegicus (Norway rat) |
Mmadhc |
NP_001004280.1 |
Xenopus tropicalis (tropical clawed frog) |
mmadhc |
NP_001016731.1 |
Pan troglodytes (chimpanzee) |
MMADHC |
XP_001135306.1 |
Canis lupus familiaris (dog) |
MMADHC |
XP_849074.1 |
Danio rerio (zebrafish) |
zgc:92335 |
NP_001002453.1 |
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following mmadhc gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the mmadhc cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OXa25614 |
Clone ID Related Accession (Same CDS sequence) |
NM_001016731.2
, XM_018097111.2
|
Accession Version |
NM_001016731.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 894bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-22 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
methylmalonic aciduria and homocystinuria type D protein, mitochondrial |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR760028.2. On Oct 14, 2005 this sequence version replaced NM_001016731.1.
##Evidence-Data-START##
Transcript exon combination :: CR760028.2, BX716075.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
gene product(s) localized to mito. :: inferred from homology
##RefSeq-Attributes-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGCTAATG CCCTATGTAG CAGAGCCAGA CTGGTGACCT ACCTCCCTAG GTTTAGTTCA TTGATTAGAA GGGTCTCAGG TACCCGGGCC TTTTCCACAG CAGGATCTTC AGGCTCTGAT GAGCCTTACA TTGCTGCTAC ACCTCCTGAT ATACTTCCCA GGACAGTATG GCCCGATGAG ACAATGGGCC CATTTGGCCC ACAAGACCAG CGCTTTCAGC TTCCAGGTAA TGTAGGATTT GATGCCCACG TGAATGGAAT AGACATTAAG AGGAGAATAG AAGTCAATAG AAATCTTCCG GACCTGCTGA CTGAGCCTCA ACCAAGTGAA AGGCATGAAT TTGTAATGGC CCAGTTTGTG ACTGAATTCC AGGGGAGTGA AGTTTCACTA GAGCCGCAGG AATTAAACAC TATGGAAAGC TACTTTGAAA ATGCAAAGGT GGAATGTGCA ATGCAGTCTT GTCCTGATCT GCTGAAAAAA GATTTTGCTT CTATGTTTCC TGAAATCCCC AGCAATAATT TAATGGTGCT AACAGTTACT CAGAGGACAC ACAATGATAT GACAATTTGG AGTCAAGAGG TGGAAAATGA GAGGGAAATG TTAATAGAAA AGTTCATGAA CGGTGCCAAA GAGATTTGCT ACGCGCTAAG GACAGAAGGA TACTGGGCGG ACTTTATTGA CCCACTGTCG GGACTTGCAT ATTTTGGGCC TTACACAAAC AACACGCTGT TTGAAACAGA TGAGCGATAT CGCCACCTGG GATTCAAAGT GGAGGACCTG GGGTGCTGTA AAGTGATTCG CCACAATGTC TGGGGAACAC ATGTAGTTGT GGGAAGTATA TTTACCAACG CCCCCTCAGA CAGTCCTATC ATGAAGAAAC TGGGGGAACA CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001016731.1 |
CDS | 83..976 |
Translation | |
Target ORF information:
RefSeq Version | NM_001016731.2 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis metabolism of cobalamin associated D (mmadhc), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001016731.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGCTAATG CCCTATGTAG CAGAGCCAGA CTGGTGACCT ACCTCCCTAG GTTTAGTTCA TTGATTAGAA GGGTCTCAGG TACCCGGGCC TTTTCCACAG CAGGATCTTC AGGCTCTGAT GAGCCTTACA TTGCTGCTAC ACCTCCTGAT ATACTTCCCA GGACAGTATG GCCCGATGAG ACAATGGGCC CATTTGGCCC ACAAGACCAG CGCTTTCAGC TTCCAGGTAA TGTAGGATTT GATGCCCACG TGAATGGAAT AGACATTAAG AGGAGAATAG AAGTCAATAG AAATCTTCCG GACCTGCTGA CTGAGCCTCA ACCAAGTGAA AGGCATGAAT TTGTAATGGC CCAGTTTGTG ACTGAATTCC AGGGGAGTGA AGTTTCACTA GAGCCGCAGG AATTAAACAC TATGGAAAGC TACTTTGAAA ATGCAAAGGT GGAATGTGCA ATGCAGTCTT GTCCTGATCT GCTGAAAAAA GATTTTGCTT CTATGTTTCC TGAAATCCCC AGCAATAATT TAATGGTGCT AACAGTTACT CAGAGGACAC ACAATGATAT GACAATTTGG AGTCAAGAGG TGGAAAATGA GAGGGAAATG TTAATAGAAA AGTTCATGAA CGGTGCCAAA GAGATTTGCT ACGCGCTAAG GACAGAAGGA TACTGGGCGG ACTTTATTGA CCCACTGTCG GGACTTGCAT ATTTTGGGCC TTACACAAAC AACACGCTGT TTGAAACAGA TGAGCGATAT CGCCACCTGG GATTCAAAGT GGAGGACCTG GGGTGCTGTA AAGTGATTCG CCACAATGTC TGGGGAACAC ATGTAGTTGT GGGAAGTATA TTTACCAACG CCCCCTCAGA CAGTCCTATC ATGAAGAAAC TGGGGGAACA CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa25614 |
Clone ID Related Accession (Same CDS sequence) |
NM_001016731.2
, XM_018097111.2
|
Accession Version |
XM_018097111.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 894bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-17 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030685.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Dec 18, 2019 this sequence version replaced XM_018097111.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Xenopus tropicalis Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGCTAATG CCCTATGTAG CAGAGCCAGA CTGGTGACCT ACCTCCCTAG GTTTAGTTCA TTGATTAGAA GGGTCTCAGG TACCCGGGCC TTTTCCACAG CAGGATCTTC AGGCTCTGAT GAGCCTTACA TTGCTGCTAC ACCTCCTGAT ATACTTCCCA GGACAGTATG GCCCGATGAG ACAATGGGCC CATTTGGCCC ACAAGACCAG CGCTTTCAGC TTCCAGGTAA TGTAGGATTT GATGCCCACG TGAATGGAAT AGACATTAAG AGGAGAATAG AAGTCAATAG AAATCTTCCG GACCTGCTGA CTGAGCCTCA ACCAAGTGAA AGGCATGAAT TTGTAATGGC CCAGTTTGTG ACTGAATTCC AGGGGAGTGA AGTTTCACTA GAGCCGCAGG AATTAAACAC TATGGAAAGC TACTTTGAAA ATGCAAAGGT GGAATGTGCA ATGCAGTCTT GTCCTGATCT GCTGAAAAAA GATTTTGCTT CTATGTTTCC TGAAATCCCC AGCAATAATT TAATGGTGCT AACAGTTACT CAGAGGACAC ACAATGATAT GACAATTTGG AGTCAAGAGG TGGAAAATGA GAGGGAAATG TTAATAGAAA AGTTCATGAA CGGTGCCAAA GAGATTTGCT ACGCGCTAAG GACAGAAGGA TACTGGGCGG ACTTTATTGA CCCACTGTCG GGACTTGCAT ATTTTGGGCC TTACACAAAC AACACGCTGT TTGAAACAGA TGAGCGATAT CGCCACCTGG GATTCAAAGT GGAGGACCTG GGGTGCTGTA AAGTGATTCG CCACAATGTC TGGGGAACAC ATGTAGTTGT GGGAAGTATA TTTACCAACG CCCCCTCAGA CAGTCCTATC ATGAAGAAAC TGGGGGAACA CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_017952600.2 |
CDS | 299..1192 |
Translation | |
Target ORF information:
RefSeq Version | XM_018097111.2 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis metabolism of cobalamin associated D (mmadhc), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_018097111.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGCTAATG CCCTATGTAG CAGAGCCAGA CTGGTGACCT ACCTCCCTAG GTTTAGTTCA TTGATTAGAA GGGTCTCAGG TACCCGGGCC TTTTCCACAG CAGGATCTTC AGGCTCTGAT GAGCCTTACA TTGCTGCTAC ACCTCCTGAT ATACTTCCCA GGACAGTATG GCCCGATGAG ACAATGGGCC CATTTGGCCC ACAAGACCAG CGCTTTCAGC TTCCAGGTAA TGTAGGATTT GATGCCCACG TGAATGGAAT AGACATTAAG AGGAGAATAG AAGTCAATAG AAATCTTCCG GACCTGCTGA CTGAGCCTCA ACCAAGTGAA AGGCATGAAT TTGTAATGGC CCAGTTTGTG ACTGAATTCC AGGGGAGTGA AGTTTCACTA GAGCCGCAGG AATTAAACAC TATGGAAAGC TACTTTGAAA ATGCAAAGGT GGAATGTGCA ATGCAGTCTT GTCCTGATCT GCTGAAAAAA GATTTTGCTT CTATGTTTCC TGAAATCCCC AGCAATAATT TAATGGTGCT AACAGTTACT CAGAGGACAC ACAATGATAT GACAATTTGG AGTCAAGAGG TGGAAAATGA GAGGGAAATG TTAATAGAAA AGTTCATGAA CGGTGCCAAA GAGATTTGCT ACGCGCTAAG GACAGAAGGA TACTGGGCGG ACTTTATTGA CCCACTGTCG GGACTTGCAT ATTTTGGGCC TTACACAAAC AACACGCTGT TTGAAACAGA TGAGCGATAT CGCCACCTGG GATTCAAAGT GGAGGACCTG GGGTGCTGTA AAGTGATTCG CCACAATGTC TGGGGAACAC ATGTAGTTGT GGGAAGTATA TTTACCAACG CCCCCTCAGA CAGTCCTATC ATGAAGAAAC TGGGGGAACA CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa46586 |
Clone ID Related Accession (Same CDS sequence) |
XM_018097111.1
|
Accession Version |
XM_018097111.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 894bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-09-07 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030685.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Xenopus tropicalis Annotation Release 103
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGCTAATG CCCTATGTAG CAGAGCCAGA CTGGTGACCT ACCTCCCTAG GTTTAGTTTG TTGATTAGAA GGGTCTCAGG TACCCGGGCC TTTTCCACAG CAGGATCTTC AGGCTCTGAT GAGCCTTACA TTGCTGCTAC ACCTCCTGAT ATACTTCCCA GGACAGTATG GCCCGATGAG ACAATGGGCC CCTTTGGCCC ACAAGACCAG CGCTTTCAGC TTCCAGGTAA TGTAGGATTT GATGCCCACG TGAATGGAAT AGACATTAAG AGGAGAATAG AAGTCAATAG AAATCTTCCG GACCTGCTGA CTGAGCCTCA ACCGAGTGAA AGGCATGAAT TTGTAATGGC CCAGTTTGTG ACTGAATTCC AGGGGAGTGA AGTTTCGCTA GAGCCGCAGG AATTAAACAC TATGGAAAGC TACTTTGAAA ATGCAAAGGT GGAATGTGCA ATGCAGTCTT GTCCTGATCT GCTGAAAAAA GATTTTGCTT CTATGTTTCC TGAAATCCCC AGCAATAATT TAATGGTGCT AACAGTTACT CAGAGGACAC ACAATGATAT GACAATTTGG AGTCAAGAGG TGGAAAATGA GAGGGAAATG TTAATAGAAA AGTTCATGAA CGGTGCCAAA GAGATTTGCT ACGCGCTAAG GACAGAAGGA TACTGGGCGG ACTTTATTGA CCCACTGTCG GGACTTGCAT ATTTTGGGCC TTACACAAAC AACACGCTGT TTGAAACAGA TGAGCGATAT CGCCACCTGG GATTCAAAGT GGAGGACCTG GGGTGCTGTA AAGTGATTCG CCACAATGTC TGGGGAACAC ATGTAGTTGT GGGAAGTATA TTTACCAACG CCCCCTCAGA CAGTCCTATC ATGAAGAAAC TGGGGGAACA CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_017952600.1 |
CDS | 354..1247 |
Translation | |
Target ORF information:
RefSeq Version | XM_018097111.1 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis methylmalonic aciduria and homocystinuria, cblD type (mmadhc), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_018097111.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGCTAATG CCCTATGTAG CAGAGCCAGA CTGGTGACCT ACCTCCCTAG GTTTAGTTTG TTGATTAGAA GGGTCTCAGG TACCCGGGCC TTTTCCACAG CAGGATCTTC AGGCTCTGAT GAGCCTTACA TTGCTGCTAC ACCTCCTGAT ATACTTCCCA GGACAGTATG GCCCGATGAG ACAATGGGCC CCTTTGGCCC ACAAGACCAG CGCTTTCAGC TTCCAGGTAA TGTAGGATTT GATGCCCACG TGAATGGAAT AGACATTAAG AGGAGAATAG AAGTCAATAG AAATCTTCCG GACCTGCTGA CTGAGCCTCA ACCGAGTGAA AGGCATGAAT TTGTAATGGC CCAGTTTGTG ACTGAATTCC AGGGGAGTGA AGTTTCGCTA GAGCCGCAGG AATTAAACAC TATGGAAAGC TACTTTGAAA ATGCAAAGGT GGAATGTGCA ATGCAGTCTT GTCCTGATCT GCTGAAAAAA GATTTTGCTT CTATGTTTCC TGAAATCCCC AGCAATAATT TAATGGTGCT AACAGTTACT CAGAGGACAC ACAATGATAT GACAATTTGG AGTCAAGAGG TGGAAAATGA GAGGGAAATG TTAATAGAAA AGTTCATGAA CGGTGCCAAA GAGATTTGCT ACGCGCTAAG GACAGAAGGA TACTGGGCGG ACTTTATTGA CCCACTGTCG GGACTTGCAT ATTTTGGGCC TTACACAAAC AACACGCTGT TTGAAACAGA TGAGCGATAT CGCCACCTGG GATTCAAAGT GGAGGACCTG GGGTGCTGTA AAGTGATTCG CCACAATGTC TGGGGAACAC ATGTAGTTGT GGGAAGTATA TTTACCAACG CCCCCTCAGA CAGTCCTATC ATGAAGAAAC TGGGGGAACA CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.