• English
  • Sign In
    Please Sign In
    Sign In
    New to GenScript?
    Register
  • Contact Us
×
Contact us now: +1-877-436-7274

snrpa cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol snrpa
Entrez Gene ID 549538
Full Name small nuclear ribonucleoprotein polypeptide A
Synonyms mud1,u1a
General protein information
Preferred Names

small nuclear ribonucleoprotein polypeptide A

Names

U1 small nuclear ribonucleoprotein A
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012968443.2 XP_012823897.1 U1 small nuclear ribonucleoprotein A isoform X1
NM_001016784.2 NP_001016784.1 U1 small nuclear ribonucleoprotein A
XM_012968443.3 XP_012823897.1 U1 small nuclear ribonucleoprotein A isoform X1

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) SNRPA XP_533663.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP011637 XP_320869.2
Oryza sativa (rice) Os05g0154800 NP_001054685.1
Bos taurus (cattle) SNRPA NP_001039504.1
Homo sapiens (human) SNRPA NP_004587.1
Rattus norvegicus (Norway rat) Snrpa NP_001008304.1
Danio rerio (zebrafish) snrpa NP_955965.1
Caenorhabditis elegans (roundworm) rnp-2 NP_500504.1
Schizosaccharomyces pombe (fission yeast) usp102 NP_596424.1
Pan troglodytes (chimpanzee) SNRPA XP_512674.2
SNRPA XP_001098504.1
Drosophila melanogaster (fruit fly) snf NP_511045.1
Neurospora crassa NCU08034 XP_962704.1
Magnaporthe oryzae (rice blast fungus) MGG_07085 XP_003715274.1
Arabidopsis thaliana (thale cress) U1A NP_182280.1
Xenopus tropicalis (tropical clawed frog) snrpa NP_001016784.1

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following snrpa gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the snrpa cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa21052 NM_001016784.2
Latest version!		 Xenopus tropicalis small nuclear ribonucleoprotein polypeptide A (snrpa), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
OXa21052 XM_012968443.3
Latest version!		 Xenopus tropicalis small nuclear ribonucleoprotein polypeptide A (snrpa), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00
View Old Accession Versions >>
OXa21052 XM_012968443.2 Xenopus tropicalis small nuclear ribonucleoprotein polypeptide A (snrpa), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa21052
Clone ID Related Accession (Same CDS sequence) XM_012968443.2 , NM_001016784.2 , XM_012968443.3
Accession Version NM_001016784.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 849bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-22
Organism Xenopus tropicalis(tropical clawed frog)
Product U1 small nuclear ribonucleoprotein A
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC090598.1. On May 1, 2005 this sequence version replaced NM_001016784.1. ##Evidence-Data-START## Transcript exon combination :: BC090598.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTGTTC AAGAAGTCAG GCCTAATAAC ACAATCTACA TCAACAACCT GAATGAGAAA 
ATTAAAAAAG ATGAGCTAAA GAAGTCTCTT TATGCCATAT TCTCACAGTT TGGTCAGATT 
CTGGATATCT TGGTGTCTCG CAGCCTGAAG ATGAGAGGAC AGGCTTTTGT TATATTTAAA 
GAAATAAGCA GTGCCACAAA TGCTCTGAGG TCAATGCAGG GGTTTCCCTT TTATGATAAA 
CCAATGAGAA TACAATATTC AAAATCCGAT TCTGACATCA TTGCCAAAAT GAAAGGTACC 
TATGTGGAAA GAGACAGAAA GAGGCAGGAG AAGAGGAAGG TGAAAGGCCA GGAAGCTCCG 
GGTGTTAAAA AGGCTTTACC AGGTGCTGCG TTGCTTCCAG GCGTTCCAGG ACAGATGGCG 
GGCATGCAAA ATATACCTGG TATGACTCAA GCTCCACGCA TGATGCATAT GGCTGGGCAG 
GCACCCTACA TGCATCACCC TGGTATGATG CCACCACCAG GGATGGCACC AGGACAGATC 
CCACCAGGAG GCATGCCCCA TGGACACCTG ATGCCTGGGC AGATGGCACC CATGCAGCCA 
ATTTCTGAAA ACCCACCTAA CCACATCCTC TTCCTCACCA ACCTTCCAGA GGAAACAAAT 
GAGCTAATGC TATCTATGCT GTTTAACCAA TTTCCTGGTT TCAAGGAAGT TCGACTTGTC 
CCTGGCCGCC ATGACATTGC TTTTGTGGAA TTCGATAATG AGGTTCAGGC AGGAGCTGCT 
CGCGAGTCTC TTCAGGGATT CAAGATCACA CAGAGCAACT CCATGAAGAT TTCATTTGCT 
AAGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001016784.1
CDS254..1102
Translation

Target ORF information:

RefSeq Version NM_001016784.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis small nuclear ribonucleoprotein polypeptide A (snrpa), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001016784.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTGTTC AAGAAGTCAG GCCTAATAAC ACAATCTACA TCAACAACCT GAATGAGAAA 
ATTAAAAAAG ATGAGCTAAA GAAGTCTCTT TATGCCATAT TCTCACAGTT TGGTCAGATT 
CTGGATATCT TGGTGTCTCG CAGCCTGAAG ATGAGAGGAC AGGCTTTTGT TATATTTAAA 
GAAATAAGCA GTGCCACAAA TGCTCTGAGG TCAATGCAGG GGTTTCCCTT TTATGATAAA 
CCAATGAGAA TACAATATTC AAAATCCGAT TCTGACATCA TTGCCAAAAT GAAAGGTACC 
TATGTGGAAA GAGACAGAAA GAGGCAGGAG AAGAGGAAGG TGAAAGGCCA GGAAGCTCCG 
GGTGTTAAAA AGGCTTTACC AGGTGCTGCG TTGCTTCCAG GCGTTCCAGG ACAGATGGCG 
GGCATGCAAA ATATACCTGG TATGACTCAA GCTCCACGCA TGATGCATAT GGCTGGGCAG 
GCACCCTACA TGCATCACCC TGGTATGATG CCACCACCAG GGATGGCACC AGGACAGATC 
CCACCAGGAG GCATGCCCCA TGGACACCTG ATGCCTGGGC AGATGGCACC CATGCAGCCA 
ATTTCTGAAA ACCCACCTAA CCACATCCTC TTCCTCACCA ACCTTCCAGA GGAAACAAAT 
GAGCTAATGC TATCTATGCT GTTTAACCAA TTTCCTGGTT TCAAGGAAGT TCGACTTGTC 
CCTGGCCGCC ATGACATTGC TTTTGTGGAA TTCGATAATG AGGTTCAGGC AGGAGCTGCT 
CGCGAGTCTC TTCAGGGATT CAAGATCACA CAGAGCAACT CCATGAAGAT TTCATTTGCT 
AAGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa21052
Clone ID Related Accession (Same CDS sequence) XM_012968443.2 , NM_001016784.2 , XM_012968443.3
Accession Version XM_012968443.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 849bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product U1 small nuclear ribonucleoprotein A isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012968443.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTGTTC AAGAAGTCAG GCCTAATAAC ACAATCTACA TCAACAACCT GAATGAGAAA 
ATTAAAAAAG ATGAGCTAAA GAAGTCTCTT TATGCCATAT TCTCACAGTT TGGTCAGATT 
CTGGATATCT TGGTGTCTCG CAGCCTGAAG ATGAGAGGAC AGGCTTTTGT TATATTTAAA 
GAAATAAGCA GTGCCACAAA TGCTCTGAGG TCAATGCAGG GGTTTCCCTT TTATGATAAA 
CCAATGAGAA TACAATATTC AAAATCCGAT TCTGACATCA TTGCCAAAAT GAAAGGTACC 
TATGTGGAAA GAGACAGAAA GAGGCAGGAG AAGAGGAAGG TGAAAGGCCA GGAAGCTCCG 
GGTGTTAAAA AGGCTTTACC AGGTGCTGCG TTGCTTCCAG GCGTTCCAGG ACAGATGGCG 
GGCATGCAAA ATATACCTGG TATGACTCAA GCTCCACGCA TGATGCATAT GGCTGGGCAG 
GCACCCTACA TGCATCACCC TGGTATGATG CCACCACCAG GGATGGCACC AGGACAGATC 
CCACCAGGAG GCATGCCCCA TGGACACCTG ATGCCTGGGC AGATGGCACC CATGCAGCCA 
ATTTCTGAAA ACCCACCTAA CCACATCCTC TTCCTCACCA ACCTTCCAGA GGAAACAAAT 
GAGCTAATGC TATCTATGCT GTTTAACCAA TTTCCTGGTT TCAAGGAAGT TCGACTTGTC 
CCTGGCCGCC ATGACATTGC TTTTGTGGAA TTCGATAATG AGGTTCAGGC AGGAGCTGCT 
CGCGAGTCTC TTCAGGGATT CAAGATCACA CAGAGCAACT CCATGAAGAT TTCATTTGCT 
AAGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012823897.1
CDS42..890
Translation

Target ORF information:

RefSeq Version XM_012968443.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis small nuclear ribonucleoprotein polypeptide A (snrpa), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012968443.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTGTTC AAGAAGTCAG GCCTAATAAC ACAATCTACA TCAACAACCT GAATGAGAAA 
ATTAAAAAAG ATGAGCTAAA GAAGTCTCTT TATGCCATAT TCTCACAGTT TGGTCAGATT 
CTGGATATCT TGGTGTCTCG CAGCCTGAAG ATGAGAGGAC AGGCTTTTGT TATATTTAAA 
GAAATAAGCA GTGCCACAAA TGCTCTGAGG TCAATGCAGG GGTTTCCCTT TTATGATAAA 
CCAATGAGAA TACAATATTC AAAATCCGAT TCTGACATCA TTGCCAAAAT GAAAGGTACC 
TATGTGGAAA GAGACAGAAA GAGGCAGGAG AAGAGGAAGG TGAAAGGCCA GGAAGCTCCG 
GGTGTTAAAA AGGCTTTACC AGGTGCTGCG TTGCTTCCAG GCGTTCCAGG ACAGATGGCG 
GGCATGCAAA ATATACCTGG TATGACTCAA GCTCCACGCA TGATGCATAT GGCTGGGCAG 
GCACCCTACA TGCATCACCC TGGTATGATG CCACCACCAG GGATGGCACC AGGACAGATC 
CCACCAGGAG GCATGCCCCA TGGACACCTG ATGCCTGGGC AGATGGCACC CATGCAGCCA 
ATTTCTGAAA ACCCACCTAA CCACATCCTC TTCCTCACCA ACCTTCCAGA GGAAACAAAT 
GAGCTAATGC TATCTATGCT GTTTAACCAA TTTCCTGGTT TCAAGGAAGT TCGACTTGTC 
CCTGGCCGCC ATGACATTGC TTTTGTGGAA TTCGATAATG AGGTTCAGGC AGGAGCTGCT 
CGCGAGTCTC TTCAGGGATT CAAGATCACA CAGAGCAACT CCATGAAGAT TTCATTTGCT 
AAGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa21052
Clone ID Related Accession (Same CDS sequence) XM_012968443.2 , NM_001016784.2 , XM_012968443.3
Accession Version XM_012968443.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 849bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product U1 small nuclear ribonucleoprotein A isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012968443.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTGTTC AAGAAGTCAG GCCTAATAAC ACAATCTACA TCAACAACCT GAATGAGAAA 
ATTAAAAAAG ATGAGCTAAA GAAGTCTCTT TATGCCATAT TCTCACAGTT TGGTCAGATT 
CTGGATATCT TGGTGTCTCG CAGCCTGAAG ATGAGAGGAC AGGCTTTTGT TATATTTAAA 
GAAATAAGCA GTGCCACAAA TGCTCTGAGG TCAATGCAGG GGTTTCCCTT TTATGATAAA 
CCAATGAGAA TACAATATTC AAAATCCGAT TCTGACATCA TTGCCAAAAT GAAAGGTACC 
TATGTGGAAA GAGACAGAAA GAGGCAGGAG AAGAGGAAGG TGAAAGGCCA GGAAGCTCCG 
GGTGTTAAAA AGGCTTTACC AGGTGCTGCG TTGCTTCCAG GCGTTCCAGG ACAGATGGCG 
GGCATGCAAA ATATACCTGG TATGACTCAA GCTCCACGCA TGATGCATAT GGCTGGGCAG 
GCACCCTACA TGCATCACCC TGGTATGATG CCACCACCAG GGATGGCACC AGGACAGATC 
CCACCAGGAG GCATGCCCCA TGGACACCTG ATGCCTGGGC AGATGGCACC CATGCAGCCA 
ATTTCTGAAA ACCCACCTAA CCACATCCTC TTCCTCACCA ACCTTCCAGA GGAAACAAAT 
GAGCTAATGC TATCTATGCT GTTTAACCAA TTTCCTGGTT TCAAGGAAGT TCGACTTGTC 
CCTGGCCGCC ATGACATTGC TTTTGTGGAA TTCGATAATG AGGTTCAGGC AGGAGCTGCT 
CGCGAGTCTC TTCAGGGATT CAAGATCACA CAGAGCAACT CCATGAAGAT TTCATTTGCT 
AAGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012823897.1
CDS42..890
Translation

Target ORF information:

RefSeq Version XM_012968443.3
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis small nuclear ribonucleoprotein polypeptide A (snrpa), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012968443.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTGTTC AAGAAGTCAG GCCTAATAAC ACAATCTACA TCAACAACCT GAATGAGAAA 
ATTAAAAAAG ATGAGCTAAA GAAGTCTCTT TATGCCATAT TCTCACAGTT TGGTCAGATT 
CTGGATATCT TGGTGTCTCG CAGCCTGAAG ATGAGAGGAC AGGCTTTTGT TATATTTAAA 
GAAATAAGCA GTGCCACAAA TGCTCTGAGG TCAATGCAGG GGTTTCCCTT TTATGATAAA 
CCAATGAGAA TACAATATTC AAAATCCGAT TCTGACATCA TTGCCAAAAT GAAAGGTACC 
TATGTGGAAA GAGACAGAAA GAGGCAGGAG AAGAGGAAGG TGAAAGGCCA GGAAGCTCCG 
GGTGTTAAAA AGGCTTTACC AGGTGCTGCG TTGCTTCCAG GCGTTCCAGG ACAGATGGCG 
GGCATGCAAA ATATACCTGG TATGACTCAA GCTCCACGCA TGATGCATAT GGCTGGGCAG 
GCACCCTACA TGCATCACCC TGGTATGATG CCACCACCAG GGATGGCACC AGGACAGATC 
CCACCAGGAG GCATGCCCCA TGGACACCTG ATGCCTGGGC AGATGGCACC CATGCAGCCA 
ATTTCTGAAA ACCCACCTAA CCACATCCTC TTCCTCACCA ACCTTCCAGA GGAAACAAAT 
GAGCTAATGC TATCTATGCT GTTTAACCAA TTTCCTGGTT TCAAGGAAGT TCGACTTGTC 
CCTGGCCGCC ATGACATTGC TTTTGTGGAA TTCGATAATG AGGTTCAGGC AGGAGCTGCT 
CGCGAGTCTC TTCAGGGATT CAAGATCACA CAGAGCAACT CCATGAAGAT TTCATTTGCT 
AAGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P