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npy cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol npy
Entrez Gene ID 779985
Full Name neuropeptide Y
Synonyms NPY2,npy-a,npy-b,prepronpy,pyy4,xnpy
General protein information
Preferred Names

neuropeptide Y

Names

pro-neuropeptide Y
neuropeptide Y2
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001079062.1 NP_001072530.1 pro-neuropeptide Y precursor
XM_012964911.2 XP_012820365.1 pro-neuropeptide Y isoform X1
XM_012964911.3 XP_012820365.1 pro-neuropeptide Y isoform X1

Pathways from BioSystems


Homologies


Mus musculus (house mouse) Npy NP_075945.1
Homo sapiens (human) NPY NP_000896.1
Rattus norvegicus (Norway rat) LOC100912228 XP_003749793.1
Gallus gallus (chicken) NPY NP_990804.1
Danio rerio (zebrafish) npy NP_571149.1
Canis lupus familiaris (dog) NPY XP_005628694.1
Rattus norvegicus (Norway rat) Npy NP_036746.1
Xenopus tropicalis (tropical clawed frog) npy NP_001072530.1
Pan troglodytes (chimpanzee) NPY XP_001159094.1
NPY NP_001027986.1
Bos taurus (cattle) NPY NP_001014845.1

Gene Ontology


Bibliography

Related articles in PubMed

Prevertebrate Local Gene Duplication Facilitated Expansion of the Neuropeptide GPCR Superfamily.
Yun S, Furlong M, Sim M, Cho M, Park S, Cho EB, Reyes-Alcaraz A, Hwang JI, Kim J, Seong JY
Molecular biology and evolution32(11)2803-17(2015 Nov)

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following npy gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the npy cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa23451 NM_001079062.1
Latest version!		 Xenopus tropicalis neuropeptide Y (npy), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
OXa23451 XM_012964911.2
Latest version!		 Xenopus tropicalis neuropeptide Y (npy), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
OXa59780 XM_012964911.3
Latest version!		 Xenopus tropicalis neuropeptide Y (npy), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa23451
Clone ID Related Accession (Same CDS sequence) NM_001079062.1 , XM_012964911.2
Accession Version NM_001079062.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 294bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-21
Organism Xenopus tropicalis(tropical clawed frog)
Product pro-neuropeptide Y precursor
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC121985.1. ##Evidence-Data-START## Transcript exon combination :: BC135387.1, CX875266.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028295, SAMD00028303 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
ATGCAGGGAA ACATGAGGTT GTGGATGTCA GTGCTCACTT TGTGTCTGTC TATGCTGATC 
TGCTTGGGTA CATTTGCTGA GGCTTATCCA TCAAAACCAG ACAATCCAGG GGAGGACGCA 
CCAGCAGAGG ACATGGCCAA ATATTACTCT GCACTGAGGC ATTATATTAA CCTTATAACA 
AGACAGAGAT ATGGGAAGAG ATCAAGCCCA GAGACAATGC TTTCAGATGT TTGGTGGAGA 
GAAAGCACAG AAAACATCCC CCGATCACGG TTTGAAGACC CCCCTATGTG GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001072530.1
CDS58..351
Translation

Target ORF information:

RefSeq Version NM_001079062.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis neuropeptide Y (npy), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001079062.1

ORF Insert Sequence:

1
61
121
181
241
ATGCAGGGAA ACATGAGGTT GTGGATGTCA GTGCTCACTT TGTGTCTGTC TATGCTGATC 
TGCTTGGGTA CATTTGCTGA GGCTTATCCA TCAAAACCAG ACAATCCAGG GGAGGACGCA 
CCAGCAGAGG ACATGGCCAA ATATTACTCT GCACTGAGGC ATTATATTAA CCTTATAACA 
AGACAGAGAT ATGGGAAGAG ATCAAGCCCA GAGACAATGC TTTCAGATGT TTGGTGGAGA 
GAAAGCACAG AAAACATCCC CCGATCACGG TTTGAAGACC CCCCTATGTG GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa23451
Clone ID Related Accession (Same CDS sequence) NM_001079062.1 , XM_012964911.2
Accession Version XM_012964911.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 294bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product pro-neuropeptide Y isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030682.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012964911.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
ATGCAGGGAA ACATGAGGTT GTGGATGTCA GTGCTCACTT TGTGTCTGTC TATGCTGATC 
TGCTTGGGTA CATTTGCTGA GGCTTATCCA TCAAAACCAG ACAATCCAGG GGAGGACGCA 
CCAGCAGAGG ACATGGCCAA ATATTACTCT GCACTGAGGC ATTATATTAA CCTTATAACA 
AGACAGAGAT ATGGGAAGAG ATCAAGCCCA GAGACAATGC TTTCAGATGT TTGGTGGAGA 
GAAAGCACAG AAAACATCCC CCGATCACGG TTTGAAGACC CCCCTATGTG GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012820365.1
CDS326..619
Translation

Target ORF information:

RefSeq Version XM_012964911.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis neuropeptide Y (npy), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012964911.2

ORF Insert Sequence:

1
61
121
181
241
ATGCAGGGAA ACATGAGGTT GTGGATGTCA GTGCTCACTT TGTGTCTGTC TATGCTGATC 
TGCTTGGGTA CATTTGCTGA GGCTTATCCA TCAAAACCAG ACAATCCAGG GGAGGACGCA 
CCAGCAGAGG ACATGGCCAA ATATTACTCT GCACTGAGGC ATTATATTAA CCTTATAACA 
AGACAGAGAT ATGGGAAGAG ATCAAGCCCA GAGACAATGC TTTCAGATGT TTGGTGGAGA 
GAAAGCACAG AAAACATCCC CCGATCACGG TTTGAAGACC CCCCTATGTG GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa59780
Clone ID Related Accession (Same CDS sequence) XM_012964911.3
Accession Version XM_012964911.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 294bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product pro-neuropeptide Y isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030682.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012964911.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
ATGCAGGGAA ACATGAGGTT GTGGATGTCA GTGCTCACTT TGTGTCTGTC TATGCTGATC 
TGCTTGGGTA CATTTGCTGA GGCTTATCCA TCAAAACCAG ACAATCCAGG GGAGGACGCA 
CCAGCAGAGG ACATGGCCAA ATATTACTCT GCACTGAGGC ATTATATTAA CCTTATAACA 
AGACAGAGAT ATGGGAAGAG ATCAAGTCCA GAGACAATGC TTTCAGATGT TTGGTGGAGA 
GAAAGCACAG AAAACATCCC CCGATCACGG TTTGAAGACC CCCCTATGTG GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012820365.1
CDS302..595
Translation

Target ORF information:

RefSeq Version XM_012964911.3
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis neuropeptide Y (npy), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012964911.3

ORF Insert Sequence:

1
61
121
181
241
ATGCAGGGAA ACATGAGGTT GTGGATGTCA GTGCTCACTT TGTGTCTGTC TATGCTGATC 
TGCTTGGGTA CATTTGCTGA GGCTTATCCA TCAAAACCAG ACAATCCAGG GGAGGACGCA 
CCAGCAGAGG ACATGGCCAA ATATTACTCT GCACTGAGGC ATTATATTAA CCTTATAACA 
AGACAGAGAT ATGGGAAGAG ATCAAGTCCA GAGACAATGC TTTCAGATGT TTGGTGGAGA 
GAAAGCACAG AAAACATCCC CCGATCACGG TTTGAAGACC CCCCTATGTG GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Prevertebrate Local Gene Duplication Facilitated Expansion of the Neuropeptide GPCR Superfamily.
Molecular biology and evolution32(11)2803-17(2015 Nov)
Yun S,Furlong M,Sim M,Cho M,Park S,Cho EB,Reyes-Alcaraz A,Hwang JI,Kim J,Seong JY


book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P