Gene Symbol |
mlc1 |
Entrez Gene ID |
780383 |
Full Name |
megalencephalic leukoencephalopathy with subcortical cysts 1 |
Synonyms |
lvm,mlc,mlc1-3 |
General protein information |
- Preferred Names
megalencephalic leukoencephalopathy with subcortical cysts 1
Names
membrane protein MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1 gene product
|
Gene Type |
protein-coding |
Organism |
Xenopus tropicalis(tropical clawed frog) |
|
MLC1 |
XP_001111622.1 |
Mus musculus (house mouse) |
Mlc1 |
NP_573504.1 |
Rattus norvegicus (Norway rat) |
Mlc1 |
NP_001101575.1 |
Danio rerio (zebrafish) |
mlc1 |
NP_001098409.1 |
Homo sapiens (human) |
MLC1 |
NP_631941.1 |
Gallus gallus (chicken) |
MLC1 |
XP_004937559.1 |
Xenopus tropicalis (tropical clawed frog) |
mlc1 |
NP_001072921.1 |
Canis lupus familiaris (dog) |
MLC1 |
XP_848790.2 |
Pan troglodytes (chimpanzee) |
MLC1 |
XP_515212.3 |
Bos taurus (cattle) |
MLC1 |
NP_001070420.1 |
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following mlc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the mlc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OXa00938 |
Clone ID Related Accession (Same CDS sequence) |
NM_001079453.1
|
Accession Version |
NM_001079453.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1134bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-22 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
membrane protein MLC1 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC121460.1.
##Evidence-Data-START##
Transcript exon combination :: BC121460.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMD00028309, SAMD00028312 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAGG CATGGCATAT GGGAGTTGTT TGAAGCAGAT TAAATTTCCT TCTCGACTGA TGAAATCTTA TTCAATTGTG GAGGTGATTG TAGGAGTTTG TGCAGTATTT GGTGGTGTTA TTGCACTTAA CTTTGATGCT CTGTTACACA GTCTTTACCT CTATGTATCC ATCTTCTGGG TATTAGCAGC GTGTTTTCCA AATGCCGTCG TAAGCCATAT AGCTGCTGAA TATCCCACTA AATGCTTGGT GGAGGGGCTC ATCGTGACAA GCAGTATAAC ATCTCCCTTG CTGTTTGCAA CGTCAGCCTT CCTGTCTTTC AGTATTATAA GGACCATTGA CATTTTTAGA ATTTACCCGG CAATTGTTAC ACATTTTCAT GATATTGTTT TATTTCTTCT GATGCTGATC CTGTTAGTGC AGGCCTTGCT CACAAATATC ACCATCATCC AATGTGTTCA CTACAAAACA TTGATGAGAA TAGATGATTT ATCCTGGAAC ATGTCACAGG TAGACAAGAT GGATTACAGA AATAATGATG TTTCCAACAA CACTTTAAGA GAATTTGACA AAGATAAAGC ATGGAAGGCA GTAGTGGTAC AAATGACACA ATAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001072921.1 |
CDS | 94..1227 |
Translation | |
Target ORF information:
RefSeq Version | NM_001079453.1 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis megalencephalic leukoencephalopathy with subcortical cysts 1 (mlc1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001079453.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAGG CATGGCATAT GGGAGTTGTT TGAAGCAGAT TAAATTTCCT TCTCGACTGA TGAAATCTTA TTCAATTGTG GAGGTGATTG TAGGAGTTTG TGCAGTATTT GGTGGTGTTA TTGCACTTAA CTTTGATGCT CTGTTACACA GTCTTTACCT CTATGTATCC ATCTTCTGGG TATTAGCAGC GTGTTTTCCA AATGCCGTCG TAAGCCATAT AGCTGCTGAA TATCCCACTA AATGCTTGGT GGAGGGGCTC ATCGTGACAA GCAGTATAAC ATCTCCCTTG CTGTTTGCAA CGTCAGCCTT CCTGTCTTTC AGTATTATAA GGACCATTGA CATTTTTAGA ATTTACCCGG CAATTGTTAC ACATTTTCAT GATATTGTTT TATTTCTTCT GATGCTGATC CTGTTAGTGC AGGCCTTGCT CACAAATATC ACCATCATCC AATGTGTTCA CTACAAAACA TTGATGAGAA TAGATGATTT ATCCTGGAAC ATGTCACAGG TAGACAAGAT GGATTACAGA AATAATGATG TTTCCAACAA CACTTTAAGA GAATTTGACA AAGATAAAGC ATGGAAGGCA GTAGTGGTAC AAATGACACA ATAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa29769 |
Clone ID Related Accession (Same CDS sequence) |
XM_012959324.2
|
Accession Version |
XM_012959324.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1068bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-09-07 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
membrane protein MLC1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Sep 8, 2016 this sequence version replaced XM_012959324.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Xenopus tropicalis Annotation Release 103
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAAT TGTGGAGGTG ATTGTAGGAG TTTGTGCAGT ATTTGGTGGT GTTATTGCAC TTAACTTTGA TGCTCTGTTA CACAGTCTTT ACCTCTATGT ATCCATCTTC TGGGTATTAG CAGCGTGTTT TCCAAATGCC GTCGTAAGCC ATATAGCTGC TGAATATCCC ACTAAATGCT TGGTGGAGGG GCTCATCGTG ACAAGCAGTA TAACATCTCC CTTGCTGTTT GCAACGTCAG CCTTCCTGTC TTTCAGTATT ATAAGGACCA TTGACATTTT TAGAATTTAC CCGGCAATTG TTACACATTT TCATGATATT GTTTTATTTC TTCTGATGCT GATCCTGTTA GTGCAGGCCT TGCTCACAAA TATCACCATC ATCCAATGTG TTCACTACAA AACATTGATG AGAATAGATG ATTTATCCTG GAACATGTCA CAGGTAGACA AGATGGATTA CAGAAATAAT GATGTTTCCA ACAACACTTT AAGAGAATTT GACAAAGATA AAGCATGGAA GGCAGTAGTG GTACAAATGA CACAATAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_012814778.1 |
CDS | 1175..2242 |
Translation | |
Target ORF information:
RefSeq Version | XM_012959324.2 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis megalencephalic leukoencephalopathy with subcortical cysts 1 (mlc1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_012959324.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAAT TGTGGAGGTG ATTGTAGGAG TTTGTGCAGT ATTTGGTGGT GTTATTGCAC TTAACTTTGA TGCTCTGTTA CACAGTCTTT ACCTCTATGT ATCCATCTTC TGGGTATTAG CAGCGTGTTT TCCAAATGCC GTCGTAAGCC ATATAGCTGC TGAATATCCC ACTAAATGCT TGGTGGAGGG GCTCATCGTG ACAAGCAGTA TAACATCTCC CTTGCTGTTT GCAACGTCAG CCTTCCTGTC TTTCAGTATT ATAAGGACCA TTGACATTTT TAGAATTTAC CCGGCAATTG TTACACATTT TCATGATATT GTTTTATTTC TTCTGATGCT GATCCTGTTA GTGCAGGCCT TGCTCACAAA TATCACCATC ATCCAATGTG TTCACTACAA AACATTGATG AGAATAGATG ATTTATCCTG GAACATGTCA CAGGTAGACA AGATGGATTA CAGAAATAAT GATGTTTCCA ACAACACTTT AAGAGAATTT GACAAAGATA AAGCATGGAA GGCAGTAGTG GTACAAATGA CACAATAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa53710 |
Clone ID Related Accession (Same CDS sequence) |
XM_018092190.2
|
Accession Version |
XM_018092190.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1134bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-17 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
membrane protein MLC1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Dec 18, 2019 this sequence version replaced XM_018092190.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Xenopus tropicalis Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAGG CATGGCATAT GGGAGTTGTT TGAAGCAGAT TAAATTTCCT TCTCGACTGA TGAAATCTTA TTCAATTGTG GAGGTGATTG TAGGAGTTTG TGCAGTATTT GGTGGTGTTA TTGCACTTAA CTTTGATGCT CTGTTACACA GTCTTTACCT CTATGTATCC ATCTTCTGGG TATTAGCAGC GTGTTTTCCA AATGCCGTTG TAAGCCATAT AGCTGCTGAA TATCCCACTA AATGCTTGGT GGAGGGGCTC ATCGTGACAA GCAGTATAAC ATCTCCCTTG CTGTTTGCAA CGTCAGCCTT CCTGTCTTTC AGTATTATAA GGACCATTGA CATTTTTAGA ATTTACCCGG CAATTGTTAC ACATTTTCAT GATATTGTTT TATTTCTTCT GATGCTGATC CTGTTAGTGC AGGCCTTGCT CACAAATATC ACCATCATCC AATGTGTTCA CTACAAAACA TTGATGAGAA TAGATGATTT ATCCTGGAAC ATGTCACAGG TAGACAAGAT GGATTACAGA AATAATGATG TTTCCAACAA CACTTTAAGA GAATTTGACA AAGATAAAGC ATGGAAGGCA GTAGTGGTAC AAATGACACA ATAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_017947679.1 |
CDS | 84..1217 |
Translation | |
Target ORF information:
RefSeq Version | XM_018092190.2 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis megalencephalic leukoencephalopathy with subcortical cysts 1 (mlc1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_018092190.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAGG CATGGCATAT GGGAGTTGTT TGAAGCAGAT TAAATTTCCT TCTCGACTGA TGAAATCTTA TTCAATTGTG GAGGTGATTG TAGGAGTTTG TGCAGTATTT GGTGGTGTTA TTGCACTTAA CTTTGATGCT CTGTTACACA GTCTTTACCT CTATGTATCC ATCTTCTGGG TATTAGCAGC GTGTTTTCCA AATGCCGTTG TAAGCCATAT AGCTGCTGAA TATCCCACTA AATGCTTGGT GGAGGGGCTC ATCGTGACAA GCAGTATAAC ATCTCCCTTG CTGTTTGCAA CGTCAGCCTT CCTGTCTTTC AGTATTATAA GGACCATTGA CATTTTTAGA ATTTACCCGG CAATTGTTAC ACATTTTCAT GATATTGTTT TATTTCTTCT GATGCTGATC CTGTTAGTGC AGGCCTTGCT CACAAATATC ACCATCATCC AATGTGTTCA CTACAAAACA TTGATGAGAA TAGATGATTT ATCCTGGAAC ATGTCACAGG TAGACAAGAT GGATTACAGA AATAATGATG TTTCCAACAA CACTTTAAGA GAATTTGACA AAGATAAAGC ATGGAAGGCA GTAGTGGTAC AAATGACACA ATAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OXa53711 |
Clone ID Related Accession (Same CDS sequence) |
XM_012959324.3
|
Accession Version |
XM_012959324.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1068bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-17 |
Organism |
Xenopus tropicalis(tropical clawed frog) |
Product |
membrane protein MLC1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Dec 18, 2019 this sequence version replaced XM_012959324.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Xenopus tropicalis Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAAT TGTGGAGGTG ATTGTAGGAG TTTGTGCAGT ATTTGGTGGT GTTATTGCAC TTAACTTTGA TGCTCTGTTA CACAGTCTTT ACCTCTATGT ATCCATCTTC TGGGTATTAG CAGCGTGTTT TCCAAATGCC GTTGTAAGCC ATATAGCTGC TGAATATCCC ACTAAATGCT TGGTGGAGGG GCTCATCGTG ACAAGCAGTA TAACATCTCC CTTGCTGTTT GCAACGTCAG CCTTCCTGTC TTTCAGTATT ATAAGGACCA TTGACATTTT TAGAATTTAC CCGGCAATTG TTACACATTT TCATGATATT GTTTTATTTC TTCTGATGCT GATCCTGTTA GTGCAGGCCT TGCTCACAAA TATCACCATC ATCCAATGTG TTCACTACAA AACATTGATG AGAATAGATG ATTTATCCTG GAACATGTCA CAGGTAGACA AGATGGATTA CAGAAATAAT GATGTTTCCA ACAACACTTT AAGAGAATTT GACAAAGATA AAGCATGGAA GGCAGTAGTG GTACAAATGA CACAATAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_012814778.1 |
CDS | 1285..2352 |
Translation | |
Target ORF information:
RefSeq Version | XM_012959324.3 |
Organism | Xenopus tropicalis(tropical clawed frog) |
Definition | Xenopus tropicalis megalencephalic leukoencephalopathy with subcortical cysts 1 (mlc1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_012959324.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGAG AAGAAGGGTT AATTGAAGAA TATGGTTATG ATCGAATGGC TACTTTAGAA CTGGGGAAGC AAGATAAGAA AAATCGCCAT ACAGATCTAA AGTCCAGTGA TATTCAGCTT CATGAGAGGC TTAAGCCATG TACTGGGTAC AAAATGTGGA TGTTTTCCTT GCTGATGGGG AGCTGCCTTA TTGCTACATC TGGATTTTCC CTTTATCTTG GCAATGTCTT TCCCTCTGAA ATGGACTACC TGCGTTGTGC TGCAGGCTCT TGTCTGCCTT CAGCGGTTGT CCATTTTGCT GTGCTGAAAA ACAAAGTTAA TGTGATGTAT CATTACCAAA TATTATTTGT GTCAACATTT TCAATAACTA CCACTTGTTT GATTTGGTTT GGATGCAAAC TCGCTATAAA CCCAACAGCA ATCAATATAA ACTTTAATCT GATTCTTCTT ATTCTGATGG AAATTCTTAT GGCAACAACA GTAATTATCT CTGCAAGATC AAATGTAGAC TGCTGTAAAG TACAGAGAAT TGTGGAGGTG ATTGTAGGAG TTTGTGCAGT ATTTGGTGGT GTTATTGCAC TTAACTTTGA TGCTCTGTTA CACAGTCTTT ACCTCTATGT ATCCATCTTC TGGGTATTAG CAGCGTGTTT TCCAAATGCC GTTGTAAGCC ATATAGCTGC TGAATATCCC ACTAAATGCT TGGTGGAGGG GCTCATCGTG ACAAGCAGTA TAACATCTCC CTTGCTGTTT GCAACGTCAG CCTTCCTGTC TTTCAGTATT ATAAGGACCA TTGACATTTT TAGAATTTAC CCGGCAATTG TTACACATTT TCATGATATT GTTTTATTTC TTCTGATGCT GATCCTGTTA GTGCAGGCCT TGCTCACAAA TATCACCATC ATCCAATGTG TTCACTACAA AACATTGATG AGAATAGATG ATTTATCCTG GAACATGTCA CAGGTAGACA AGATGGATTA CAGAAATAAT GATGTTTCCA ACAACACTTT AAGAGAATTT GACAAAGATA AAGCATGGAA GGCAGTAGTG GTACAAATGA CACAATAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.