ORF » Species Summary » Zea mays » LOC542186 cDNA ORF clone

LOC542186 cDNA ORF clone, Zea mays

The following LOC542186 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC542186 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OZa00453 NM_001111801.2
Latest version!		 Zea mays barren stalk 1 (LOC542186), mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC542186 ( NM_001111801.2 ) cDNA ORF clone, Zea mays -> NP_001105271.1 Zea mays barren stalk 1 (LOC542186), mRNA.
    Price & Availability↑
    CloneID OZa00453
    Clone ID Related Accession (Same CDS sequence) NM_001111801.2
    Accession Version NM_001111801.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 660bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-03-04
    Organism Zea mays
    Product barren stalk 1
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EU975539.1, AY683002.1 and LPUQ01001529.1. On Apr 7, 2017 this sequence version replaced NM_001111801.1. ##Evidence-Data-START## Transcript is intronless :: SRR3147022.17813.1 [ECO:0000345] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGATCCAT ATCACTACCA AACCATGTAT GACCCACGCG GCTTCCCCAT CATCCACCCG 
    CAGCCTTACC TCCAGCACCC GGTGGCCGGC GCCCTCGGTG ACAGCAGGGT GCGCGGCGGC 
    GGCAGTGGCG CGCGGCGGCG TCCTGGCGCC AAGCTCTCCA CGGACCCGCA GAGCGTTGCG 
    GCGCGCGAGC GGCGGCACCG CATCAGCGAC CGCTTCCGCG TGCTCCGCAG CCTCGTCCCC 
    GGCGGCAGCA AGATGGACAC TGTGTCCATG CTCGAGCAGG CCATCCACTA CGTCAAGTTC 
    CTCAAGACGC AGATCAGCCT GCATCAGGCC GCGCTGATGC AGCACGAGGA AGGATGCCAT 
    GCTGAGCTCG CCGCCTATTC CGCGGTGGCG GTGGTTGGTG ACAACGAGGT GACACTCGCG 
    TCCCATGGTC GTACCGGCGC ATGCGACGAG ATGATGCAGC TCCAGGTGGC GGCGGAGGAA 
    GCTTTGAGTT ATGGTGTTGA TGCCCATCAG CCGTACGGGC TCGATCCCAG GCAGCTGAGT 
    GGTGGGCACG AGCTGCCACC GCTGCCTGCT TCTTGCATCT TCCTCGAGGA GCCTGCAGAC 
    GCATGCTACT CTGTGTGTGA CCTCGACGAC GGGGACACCG GTCTGCCCGG CTCTTACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001105271.1
    CDS85..744
    Translation

    Target ORF information:

    RefSeq Version NM_001111801.2
    Organism Zea mays
    Definition Zea mays barren stalk 1 (LOC542186), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001111801.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGATCCAT ATCACTACCA AACCATGTAT GACCCACGCG GCTTCCCCAT CATCCACCCG 
    CAGCCTTACC TCCAGCACCC GGTGGCCGGC GCCCTCGGTG ACAGCAGGGT GCGCGGCGGC 
    GGCAGTGGCG CGCGGCGGCG TCCTGGCGCC AAGCTCTCCA CGGACCCGCA GAGCGTTGCG 
    GCGCGCGAGC GGCGGCACCG CATCAGCGAC CGCTTCCGCG TGCTCCGCAG CCTCGTCCCC 
    GGCGGCAGCA AGATGGACAC TGTGTCCATG CTCGAGCAGG CCATCCACTA CGTCAAGTTC 
    CTCAAGACGC AGATCAGCCT GCATCAGGCC GCGCTGATGC AGCACGAGGA AGGATGCCAT 
    GCTGAGCTCG CCGCCTATTC CGCGGTGGCG GTGGTTGGTG ACAACGAGGT GACACTCGCG 
    TCCCATGGTC GTACCGGCGC ATGCGACGAG ATGATGCAGC TCCAGGTGGC GGCGGAGGAA 
    GCTTTGAGTT ATGGTGTTGA TGCCCATCAG CCGTACGGGC TCGATCCCAG GCAGCTGAGT 
    GGTGGGCACG AGCTGCCACC GCTGCCTGCT TCTTGCATCT TCCTCGAGGA GCCTGCAGAC 
    GCATGCTACT CTGTGTGTGA CCTCGACGAC GGGGACACCG GTCTGCCCGG CTCTTACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    BARREN STALK FASTIGIATE1 is an AT-hook protein required for the formation of maize ears.
    The Plant cell23(5)1756-71(2011 May)
    Gallavotti A,Malcomber S,Gaines C,Stanfield S,Whipple C,Kellogg E,Schmidt RJ


    The B73 maize genome: complexity, diversity, and dynamics.
    Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
    Schnable PS,Ware D,Fulton RS,Stein JC,Wei F,Pasternak S,Liang C,Zhang J,Fulton L,Graves TA,Minx P,Reily AD,Courtney L,Kruchowski SS,Tomlinson C,Strong C,Delehaunty K,Fronick C,Courtney B,Rock SM,Belter E,Du F,Kim K,Abbott RM,Cotton M,Levy A,Marchetto P,Ochoa K,Jackson SM,Gillam B,Chen W,Yan L,Higginbotham J,Cardenas M,Waligorski J,Applebaum E,Phelps L,Falcone J,Kanchi K,Thane T,Scimone A,Thane N,Henke J,Wang T,Ruppert J,Shah N,Rotter K,Hodges J,Ingenthron E,Cordes M,Kohlberg S,Sgro J,Delgado B,Mead K,Chinwalla A,Leonard S,Crouse K,Collura K,Kudrna D,Currie J,He R,Angelova A,Rajasekar S,Mueller T,Lomeli R,Scara G,Ko A,Delaney K,Wissotski M,Lopez G,Campos D,Braidotti M,Ashley E,Golser W,Kim H,Lee S,Lin J,Dujmic Z,Kim W,Talag J,Zuccolo A,Fan C,Sebastian A,Kramer M,Spiegel L,Nascimento L,Zutavern T,Miller B,Ambroise C,Muller S,Spooner W,Narechania A,Ren L,Wei S,Kumari S,Faga B,Levy MJ,McMahan L,Van Buren P,Vaughn MW,Ying K,Yeh CT,Emrich SJ,Jia Y,Kalyanaraman A,Hsia AP,Barbazuk WB,Baucom RS,Brutnell TP,Carpita NC,Chaparro C,Chia JM,Deragon JM,Estill JC,Fu Y,Jeddeloh JA,Han Y,Lee H,Li P,Lisch DR,Liu S,Liu Z,Nagel DH,McCann MC,SanMiguel P,Myers AM,Nettleton D,Nguyen J,Penning BW,Ponnala L,Schneider KL,Schwartz DC,Sharma A,Soderlund C,Springer NM,Sun Q,Wang H,Waterman M,Westerman R,Wolfgruber TK,Yang L,Yu Y,Zhang L,Zhou S,Zhu Q,Bennetzen JL,Dawe RK,Jiang J,Jiang N,Presting GG,Wessler SR,Aluru S,Martienssen RA,Clifton SW,McCombie WR,Wing RA,Wilson RK


    Genetic and physical interaction suggest that BARREN STALK 1 is a target of BARREN INFLORESCENCE2 in maize inflorescence development.
    The Plant journal : for cell and molecular biology55(5)787-97(2008 Sep)
    Skirpan A,Wu X,McSteen P


    The Relationship between auxin transport and maize branching.
    Plant physiology147(4)1913-23(2008 Aug)
    Gallavotti A,Yang Y,Schmidt RJ,Jackson D


    The role of barren stalk1 in the architecture of maize.
    Nature432(7017)630-5(2004 Dec)
    Gallavotti A,Zhao Q,Kyozuka J,Meeley RB,Ritter MK,Doebley JF,P? ME,Schmidt RJ


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