ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_7188 cDNA ORF clone

THAPS_7188 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_7188 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_7188 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09045 XM_002295896.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_7188 ( XM_002295896.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295932.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09045
    Clone ID Related Accession (Same CDS sequence) XM_002295896.1
    Accession Version XM_002295896.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2442bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012070). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGCCCTTCT GTGGCAGGTG GATTGCAAGC TACTACTCAC CTTGTGTTCC ATCTCGCCCT 
    ACGCATGAGT GGGCTGCAGC CGACAAGAAC TTTCAACTGG GCCGGTTAAC TACGGACGAA 
    AAGGCAGGCA TTACATCAGT TCGCACGAAA GATGATTGGG TAGAGAATTA CGTCTCTCAA 
    ACGGTTGCGA CTCGTATCGA GAGGGAAAGA GCTGATGGCA ATCGTCACTT CTACAAAAAC 
    AAAGACTGCC AAGAAGCCTT TGCTCGCTTC ACGTGTTGGC TCAACTTCCC TCGTTGTGAC 
    GAACGATTTG AAGAGTCGCT ACCTCTTTGC CGTTCCGCTT GTGAAAATAT ATTTCGAGTA 
    TGTGGCTTTG AGAATGATCT TTGGAGATGT GAAGAAGATG TGATTGATGG CAATGACGAG 
    TACGATCTGA GAGGATTCTT TCCAGGACAG CCGTTCAAGA GGAATGAGTT CTTTCCAAAG 
    AGCAACGGAG AGCCAAAGGC AGTTTGTACT CCTAGTATCA AAGGCTCGGC ACCTTCACGA 
    TACGGTGGTG TTGCGTTTGT GGCCGTGATT GGTATCAATG CGATGCTATC ATTGATACCA 
    TCCTCGCGCT ATTGGGTAGG TGACATAGGC AAAAGTAGAG ACACAACTAC CCCAACCACA 
    ACATCATCAA ACCATCACCT GTACCAACGA CGACACCAAT CATCAAGAAC AAAACTCTCT 
    GCCTTCTTCC TCAACGACAA AGACGACAAT AACAAGACGC CTTCCAAGAA TAATGCTACG 
    CCATTGGGGA AGGACGGCTC CTCTGCCAAC GCAGACCTCC TCCAAACACT AGAGCTAAAA 
    GATGAAGCCC TCTACCAAGC ACAAACGGCG GTGTCAAGTC TCGAGAAGGC ACTGGAATCT 
    GCTGTTACGA ATTTAGAGAA TATGCAACAG CAGTTGCAAT TACGGGTGCT TCGTTTGGAG 
    AAGGAATTAC GTACTACCAA GGGTGAATTG ACTGATACGA TGGGAGAATT ACAAAAGACA 
    CGGACAGAGT TGCAAAGTAC GAGAGAGGAG TTGACACAAT CGAGAGAGGA ACGTGATGGG 
    TTGGACTGGG CATTGGGACA GAGTCAAGAG GGGCAACAGA AGGCGGAGAC AAGGGTGGAG 
    GAGCTGGAGA CGTATTTGGC TACGTTGGGG GTGGACGCTG AGACTATTAC TGCGAAGAAG 
    AAGGTCGAGT CAAATCCATG GCAACTGTGG CCGGGGAACT CAAAAACGTC TGTACCAGTA 
    CTGAACGATT GGGTAGTAAT CAACGGAAGT ATCGAGGGAG AGGTTCAAAT CTCTGGAAAA 
    GTCACAAACC ACCCTTCCAT TCCCGACGGA GATGCCATTG TCACTAGTCC TTTATCGGAT 
    GCAACCCAAG TAGCAGAAAA GAAGATTGTT TCAACCTCAT CTGGATCAAA ATACAAGCTT 
    GGAAAGCCAA TGGATATGCC GGCAAATCAA TCTCCATCCA AGTACGTAGG CGGGGGGAAA 
    GGTAGCAATT CACAGCAATA CTCAGGATCA CGAGCCAGTA TTGCACTTCC AGACCTGACT 
    GGTAAAACTA TCGGCAATGG ACGCTATCTC CTAGCAGGTC CTGCAACACC TAGTGTGAAT 
    GGAAGGAGTT TCATACAAAC TGCATACCGA TCCACTCCTG TTGGCAAACC GATTGGCGAG 
    CCACTGGCTA TCAAAGTATC GCAAAACAAG GAAGCAATGA AACGTGAGTT TGCCAATTAT 
    CAAAAGGTAT CAGCAGGCTT GAAGAAGGGG CACTTTATTC GAAGAAATGA GTTTCTACCT 
    GTGGCTGGGA ATGAAATGCC TGACAAGAGT GCGTTGGTGA TGCAACGGGG TGTGGCGGAT 
    GTCAAGGCGT TCATGCCAAA AGTAGGGGGA AGACTTGAGG GGGAAATGTT GATGGATTGT 
    GCAGTGACCG CCCTCCGTTG TGTAGAAGCA TTGCATGCTG TGAAGTTGGT GTGGAACGAT 
    CTCAAGACGG AGAATTTTGT TGTGATCGAG GACGGAGGTG GTGTGTCGTT CCGAGGAATC 
    GATCTGGAAA GTTGCATGAC AGTCAGAACA AACCCAGTGG ATTACACTCC AGAAGCATGT 
    CCACCAGAGT TTGCTCAATC ATTCCTGGAC GGAGATGCAG AGTCGTTCCT TTTAGAGTAC 
    TCGTATGACG TATGGAGTTA TGGAATGTTC CTCTATGAGA TTAGCACCGG TCGTGGCTTC 
    TTTGATGGTT ACTCAGCGGA GAAAATCACA AAACTGCTTC CATCTTTTGA ACCGGACGTG 
    AGTCAAGTAC CCGATGCACA ACTAGCTGAT TTGATTTTGC AGTGCTTGTC AAAGAACCCG 
    AAAGATCGAC CGTCGCTTGT CAGAATCGCA AAACACCCGT ACCTCGCAAG TGCGACAGCG 
    AGCAAGACTC CATTTGACTT CTTATTTGGA TCATCCATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295932.1
    CDS1..2442
    Translation

    Target ORF information:

    RefSeq Version XM_002295896.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295896.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGCCCTTCT GTGGCAGGTG GATTGCAAGC TACTACTCAC CTTGTGTTCC ATCTCGCCCT 
    ACGCATGAGT GGGCTGCAGC CGACAAGAAC TTTCAACTGG GCCGGTTAAC TACGGACGAA 
    AAGGCAGGCA TTACATCAGT TCGCACGAAA GATGATTGGG TAGAGAATTA CGTCTCTCAA 
    ACGGTTGCGA CTCGTATCGA GAGGGAAAGA GCTGATGGCA ATCGTCACTT CTACAAAAAC 
    AAAGACTGCC AAGAAGCCTT TGCTCGCTTC ACGTGTTGGC TCAACTTCCC TCGTTGTGAC 
    GAACGATTTG AAGAGTCGCT ACCTCTTTGC CGTTCCGCTT GTGAAAATAT ATTTCGAGTA 
    TGTGGCTTTG AGAATGATCT TTGGAGATGT GAAGAAGATG TGATTGATGG CAATGACGAG 
    TACGATCTGA GAGGATTCTT TCCAGGACAG CCGTTCAAGA GGAATGAGTT CTTTCCAAAG 
    AGCAACGGAG AGCCAAAGGC AGTTTGTACT CCTAGTATCA AAGGCTCGGC ACCTTCACGA 
    TACGGTGGTG TTGCGTTTGT GGCCGTGATT GGTATCAATG CGATGCTATC ATTGATACCA 
    TCCTCGCGCT ATTGGGTAGG TGACATAGGC AAAAGTAGAG ACACAACTAC CCCAACCACA 
    ACATCATCAA ACCATCACCT GTACCAACGA CGACACCAAT CATCAAGAAC AAAACTCTCT 
    GCCTTCTTCC TCAACGACAA AGACGACAAT AACAAGACGC CTTCCAAGAA TAATGCTACG 
    CCATTGGGGA AGGACGGCTC CTCTGCCAAC GCAGACCTCC TCCAAACACT AGAGCTAAAA 
    GATGAAGCCC TCTACCAAGC ACAAACGGCG GTGTCAAGTC TCGAGAAGGC ACTGGAATCT 
    GCTGTTACGA ATTTAGAGAA TATGCAACAG CAGTTGCAAT TACGGGTGCT TCGTTTGGAG 
    AAGGAATTAC GTACTACCAA GGGTGAATTG ACTGATACGA TGGGAGAATT ACAAAAGACA 
    CGGACAGAGT TGCAAAGTAC GAGAGAGGAG TTGACACAAT CGAGAGAGGA ACGTGATGGG 
    TTGGACTGGG CATTGGGACA GAGTCAAGAG GGGCAACAGA AGGCGGAGAC AAGGGTGGAG 
    GAGCTGGAGA CGTATTTGGC TACGTTGGGG GTGGACGCTG AGACTATTAC TGCGAAGAAG 
    AAGGTCGAGT CAAATCCATG GCAACTGTGG CCGGGGAACT CAAAAACGTC TGTACCAGTA 
    CTGAACGATT GGGTAGTAAT CAACGGAAGT ATCGAGGGAG AGGTTCAAAT CTCTGGAAAA 
    GTCACAAACC ACCCTTCCAT TCCCGACGGA GATGCCATTG TCACTAGTCC TTTATCGGAT 
    GCAACCCAAG TAGCAGAAAA GAAGATTGTT TCAACCTCAT CTGGATCAAA ATACAAGCTT 
    GGAAAGCCAA TGGATATGCC GGCAAATCAA TCTCCATCCA AGTACGTAGG CGGGGGGAAA 
    GGTAGCAATT CACAGCAATA CTCAGGATCA CGAGCCAGTA TTGCACTTCC AGACCTGACT 
    GGTAAAACTA TCGGCAATGG ACGCTATCTC CTAGCAGGTC CTGCAACACC TAGTGTGAAT 
    GGAAGGAGTT TCATACAAAC TGCATACCGA TCCACTCCTG TTGGCAAACC GATTGGCGAG 
    CCACTGGCTA TCAAAGTATC GCAAAACAAG GAAGCAATGA AACGTGAGTT TGCCAATTAT 
    CAAAAGGTAT CAGCAGGCTT GAAGAAGGGG CACTTTATTC GAAGAAATGA GTTTCTACCT 
    GTGGCTGGGA ATGAAATGCC TGACAAGAGT GCGTTGGTGA TGCAACGGGG TGTGGCGGAT 
    GTCAAGGCGT TCATGCCAAA AGTAGGGGGA AGACTTGAGG GGGAAATGTT GATGGATTGT 
    GCAGTGACCG CCCTCCGTTG TGTAGAAGCA TTGCATGCTG TGAAGTTGGT GTGGAACGAT 
    CTCAAGACGG AGAATTTTGT TGTGATCGAG GACGGAGGTG GTGTGTCGTT CCGAGGAATC 
    GATCTGGAAA GTTGCATGAC AGTCAGAACA AACCCAGTGG ATTACACTCC AGAAGCATGT 
    CCACCAGAGT TTGCTCAATC ATTCCTGGAC GGAGATGCAG AGTCGTTCCT TTTAGAGTAC 
    TCGTATGACG TATGGAGTTA TGGAATGTTC CTCTATGAGA TTAGCACCGG TCGTGGCTTC 
    TTTGATGGTT ACTCAGCGGA GAAAATCACA AAACTGCTTC CATCTTTTGA ACCGGACGTG 
    AGTCAAGTAC CCGATGCACA ACTAGCTGAT TTGATTTTGC AGTGCTTGTC AAAGAACCCG 
    AAAGATCGAC CGTCGCTTGT CAGAATCGCA AAACACCCGT ACCTCGCAAG TGCGACAGCG 
    AGCAAGACTC CATTTGACTT CTTATTTGGA TCATCCATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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