LINJ_01_0830 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_01_0830
Entrez Gene ID	5066111
Full Name	putative calcium/potassium channel (CAKC)
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001462659.1	XP_001462696.1	putative calcium/potassium channel (CAKC)

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_01_0830 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_01_0830 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00140	XM_001462659.1 Latest version!	Leishmania infantum JPCM5 putative calcium/potassium channel (CAKC) partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_01_0830 ( XM_001462659.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001462696.1 Leishmania infantum JPCM5 putative calcium/potassium channel (CAKC) partial mRNA.

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CloneID	OLc00140
Clone ID Related Accession (Same CDS sequence)	XM_001462659.1
Accession Version	XM_001462659.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3054bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	putative calcium/potassium channel (CAKC)
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009386). COMPLETENESS: incomplete on both ends.

ATGGACAAGC GCATGTCGCT GTGGCCTGTG CGGATGCGGC TGGGGCGCCG CAGCGACCGG 
CCACCGGTAT TCATGGACGA GCACTACGCG CACTCGGCGC AGCGCTTCCG CTCGCTGCGT 
AATTTTGTTG AGTTCCTCGA CCAGCGCCAC ACCAACGTGT CGGTCTTCGG CCTGCTCGCG 
CACACCACCA TGGAGGTCGT CTCCGTTGCC TTCTACGTGT GGACATCGCA GGTGGCTGCT 
GCAACGTCGG TGACCGAGTT CGCGTGGGAC CTGCCGGTCT TCATCGTCGA GTTGGTGCTG 
AGCATCATCT TCTTTCTGGC GTGGGTGGGG CTGTTCTTCT TCGAGCCTGA CAAGAAGGCG 
TACCTGATCT CGTGGCTGTC GCTGGTGAAC GCCATGACGA GCATTCCCAT GATCGTGATC 
GGCATCGGCG CGCTCAAGGA CTCGAGCTGG CGCTCCGTCT GGGTGCCCAT GTACCTCCGC 
GTGTGGTGGC TTTGTGACTG CCTCAGCGTG CTCATCGACT ACCCGCAGAT CGCACGCCAC 
ACTCCGGAGG TGTGGCGAGA GATGGTCCGC TACTTTATTC GGCTGTTCGC GGTCATGTGC 
ACATGCGTTG GCACGCACCA GATCGTGGAG TCCTGCTCAG GGGAGTACGT GGACTTGTAC 
GACTCCTTGT ATCTTATTAT CGCCGCCTTC GCCACGATCG GCTTCGGCGA CGTCACTGCC 
TCCACGACAC CAGCGCGCAT CTTCATGATC GCGTTCATCG TCATCGGCAT CTGCTTCTTC 
CTTCCACTGT TCCAGCGACT CGCTGTGATT GCCGAACGCA GCCAGCTCCA CAACACCTTC 
GGCGGCGGCG GCTCTGCGTC GTGGCTGCGC CGCGGCTGGA AGCACCCGCA TGTGATCATC 
TGCGGGCAGT TCAGCGACCT CTCCGTCGAG CTGCTGCTTA GGAACTTCTA CGCGGGCTGG 
CGCAAGTACC TTGACACATG CATCGTGCTC ATGGCGCCGG AGGAGCACTC GCCGGAGGTG 
CGGCTGACGG CGAACCTGCC GTGGCTGAAG GGCCGCGTGA CGCTCATGGT GGGCGACCCC 
GCGAAGCCGA AGGACCTCGA CCGCGCCAAG GCACGCGACG CCGACGCCAT TTTTCTGTTC 
GGCGACTCGC GCTCGACCGC CTACTACCAG GACTACACCA TCATTGCGCA GTCCGTGGCG 
GTGAGCCTGT ACGACCGGAA CCTGCCGCAG CACCTGCTGC TGCACCGCAA CTGCACGGTG 
AAGCAGATCA GCCCGTACGC GGCGAGCGTG CTGGAGGTGG AGCGCATACT GCACCACCTG 
TTGGGGCTGT CCATGGCGCA TCCCGGCGTC GTGCCGCTCA TCGTCAACCT GCTGCGCACC 
TACGAGTCGC TGCCGTCCGA CATCACGCTG TCGCGGCACT GGGTAGAGCA GTACGAGTAC 
TCGCTGCGCA ACGACATGTA CGGGCTAGAG ATTCCGGACG CGCTGCGCGG GCGCGAGTTC 
CGCGTGCTGG CACGATCCTT TTTTGAGAAG GACGTCACGC TCATCGGCAT CCTCAACGCG 
CGCAGCGTCG TGCAGCTCAA CCCTCGCGAG CTCGTGCCAA ACGCGAAGAA GCTCATCCTG 
ATCGCGAAGA CGATGAAGGT GGCACAGGAC GCCACCGACG CCATCGCGCG AGACCATGAG 
CAGACCTTTG GCGAGGAGAT GCTTGCGGCG CCGGACCCTG ATGAGCACGA CCGTGCGAAG 
CGGCGACGCG CAAGGTCTCG CTTCCTCGCC AGCCTCAGCA GCAGCAGCAG TAGTAGTAGT 
AGCGGTGTCG ACGGCGATGT TGGAGACCGC AACGGTGCGT CGAAGCAGCG TGGGGACCGG 
TGGCCGCGGC AGACCGCACA CGTCAGCGCG TCGCGGCCCG CGACGCCAAC GGCCACGACA 
ACCGACTCGC AGAGAACGCA GCCGGTGCGA CCACACGGTG CGGCAGCAGC GCTAGAGAAC 
GGCAACGACC TGGCGCGTGC CTTCCCCAGT GTAGTCTCGT TGCATCCCAG CGGCAGCTCC 
ATCGCCGCTG AGGACGACAG CGGCGACGAG TTTGACGCGA GGAGCCGCGT TGTCGCTGCC 
GCACCGTCGC CGCCGAGTTC CATGCGCGGA CCTCCGGTGC GCAGCGGGGC GCTGATGCGT 
ATCGACGACG CTTTCGACCT CGAGAACCAC TTCGTCGTCG TCGACCTGTC CTCCGCCAAG 
GCCAAGGACG AGTCCAGCCG CTACGCGCAG GAGGCTGTCA ACACCGCCGT CGCGCACGAC 
ATCTTCCACG TCACAATGCC AGTGCGTCAG GCGTACCCCG CCAACGACAT CGTGCTGCTC 
ACCAACGACG TCAGCTTCGG CCCCTACCTC GACTACTACT GGAGCGTGCA CCGCCAGAAC 
AGCGCCAACC CTGTCAAGTG CATCAGCGGC TGCGGCCTCA ATACCGCCGA CCTGCGCCGC 
TGCAACCTTG AGCGCTGCGC CGGCTGCTGC GTCTTCTACG CCGGCGACAT CAGCCGCTCC 
GGCTCCACCA GCGCCATGTC CATGCTTACC GTGCTGTCCA TAAACGAGAT CCTGCACGGC 
ATCCCGTCCT TCCCCGTCGT CGTCGAGCTC GAGGGCCTTG CCAACCTGCC TCTGTTCCCG 
CCGCACGCCG AGGACCCGCG CCTGCGCACG AAGGCGGACA TCGACTTTGT GTACGAGCCA 
AACTTCATCA TCGGCAACGC CGTCAGCCGC CTCATGCTGT TCCCCGCGCT GCAGCGCACC 
TACTTCATGG AGGAGTTCAT CGACGTCATG GACGTGCTCA TCAGCGGCCA CGCTCCCGAC 
ACGCCCGCGC TCGCGCGCCT GCCGCTGTCG CTGTGCCAGA CAGAGCTCCA GACCTACGAG 
GACGTCGTCG TCTACTGCCT CAAGTTCGGC TATCTGCCCA TCGCTCTGCA GCGCCGCATC 
GTCGACGTGC GCAACCCGTC CATCGACGGC CAGCGCTTCG TGCTCACGAA CCCGCCGCGC 
GCGCTGCCAG TGAACCAGCA GACGGACCTG CTCTTCTACA TCACGCCAGG GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001462696.1
CDS	1..3054
Translation	MDKRMSLWPVRMRLGRRSDRPPVFMDEHYAHSAQRFRSLRNFVEFLDQRHTNVSVFGLLAHTTMEVVSVAFYVWTSQVAAATSVTEFAWDLPVFIVELVLSIIFFLAWVGLFFFEPDKKAYLISWLSLVNAMTSIPMIVIGIGALKDSSWRSVWVPMYLRVWWLCDCLSVLIDYPQIARHTPEVWREMVRYFIRLFAVMCTCVGTHQIVESCSGEYVDLYDSLYLIIAAFATIGFGDVTASTTPARIFMIAFIVIGICFFLPLFQRLAVIAERSQLHNTFGGGGSASWLRRGWKHPHVIICGQFSDLSVELLLRNFYAGWRKYLDTCIVLMAPEEHSPEVRLTANLPWLKGRVTLMVGDPAKPKDLDRAKARDADAIFLFGDSRSTAYYQDYTIIAQSVAVSLYDRNLPQHLLLHRNCTVKQISPYAASVLEVERILHHLLGLSMAHPGVVPLIVNLLRTYESLPSDITLSRHWVEQYEYSLRNDMYGLEIPDALRGREFRVLARSFFEKDVTLIGILNARSVVQLNPRELVPNAKKLILIAKTMKVAQDATDAIARDHEQTFGEEMLAAPDPDEHDRAKRRRARSRFLASLSSSSSSSSSGVDGDVGDRNGASKQRGDRWPRQTAHVSASRPATPTATTTDSQRTQPVRPHGAAAALENGNDLARAFPSVVSLHPSGSSIAAEDDSGDEFDARSRVVAAAPSPPSSMRGPPVRSGALMRIDDAFDLENHFVVVDLSSAKAKDESSRYAQEAVNTAVAHDIFHVTMPVRQAYPANDIVLLTNDVSFGPYLDYYWSVHRQNSANPVKCISGCGLNTADLRRCNLERCAGCCVFYAGDISRSGSTSAMSMLTVLSINEILHGIPSFPVVVELEGLANLPLFPPHAEDPRLRTKADIDFVYEPNFIIGNAVSRLMLFPALQRTYFMEEFIDVMDVLISGHAPDTPALARLPLSLCQTELQTYEDVVVYCLKFGYLPIALQRRIVDVRNPSIDGQRFVLTNPPRALPVNQQTDLLFYITPG

Target ORF information:

RefSeq Version	XM_001462659.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative calcium/potassium channel (CAKC) partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001462659.1

ORF Insert Sequence:

ATGGACAAGC GCATGTCGCT GTGGCCTGTG CGGATGCGGC TGGGGCGCCG CAGCGACCGG 
CCACCGGTAT TCATGGACGA GCACTACGCG CACTCGGCGC AGCGCTTCCG CTCGCTGCGT 
AATTTTGTTG AGTTCCTCGA CCAGCGCCAC ACCAACGTGT CGGTCTTCGG CCTGCTCGCG 
CACACCACCA TGGAGGTCGT CTCCGTTGCC TTCTACGTGT GGACATCGCA GGTGGCTGCT 
GCAACGTCGG TGACCGAGTT CGCGTGGGAC CTGCCGGTCT TCATCGTCGA GTTGGTGCTG 
AGCATCATCT TCTTTCTGGC GTGGGTGGGG CTGTTCTTCT TCGAGCCTGA CAAGAAGGCG 
TACCTGATCT CGTGGCTGTC GCTGGTGAAC GCCATGACGA GCATTCCCAT GATCGTGATC 
GGCATCGGCG CGCTCAAGGA CTCGAGCTGG CGCTCCGTCT GGGTGCCCAT GTACCTCCGC 
GTGTGGTGGC TTTGTGACTG CCTCAGCGTG CTCATCGACT ACCCGCAGAT CGCACGCCAC 
ACTCCGGAGG TGTGGCGAGA GATGGTCCGC TACTTTATTC GGCTGTTCGC GGTCATGTGC 
ACATGCGTTG GCACGCACCA GATCGTGGAG TCCTGCTCAG GGGAGTACGT GGACTTGTAC 
GACTCCTTGT ATCTTATTAT CGCCGCCTTC GCCACGATCG GCTTCGGCGA CGTCACTGCC 
TCCACGACAC CAGCGCGCAT CTTCATGATC GCGTTCATCG TCATCGGCAT CTGCTTCTTC 
CTTCCACTGT TCCAGCGACT CGCTGTGATT GCCGAACGCA GCCAGCTCCA CAACACCTTC 
GGCGGCGGCG GCTCTGCGTC GTGGCTGCGC CGCGGCTGGA AGCACCCGCA TGTGATCATC 
TGCGGGCAGT TCAGCGACCT CTCCGTCGAG CTGCTGCTTA GGAACTTCTA CGCGGGCTGG 
CGCAAGTACC TTGACACATG CATCGTGCTC ATGGCGCCGG AGGAGCACTC GCCGGAGGTG 
CGGCTGACGG CGAACCTGCC GTGGCTGAAG GGCCGCGTGA CGCTCATGGT GGGCGACCCC 
GCGAAGCCGA AGGACCTCGA CCGCGCCAAG GCACGCGACG CCGACGCCAT TTTTCTGTTC 
GGCGACTCGC GCTCGACCGC CTACTACCAG GACTACACCA TCATTGCGCA GTCCGTGGCG 
GTGAGCCTGT ACGACCGGAA CCTGCCGCAG CACCTGCTGC TGCACCGCAA CTGCACGGTG 
AAGCAGATCA GCCCGTACGC GGCGAGCGTG CTGGAGGTGG AGCGCATACT GCACCACCTG 
TTGGGGCTGT CCATGGCGCA TCCCGGCGTC GTGCCGCTCA TCGTCAACCT GCTGCGCACC 
TACGAGTCGC TGCCGTCCGA CATCACGCTG TCGCGGCACT GGGTAGAGCA GTACGAGTAC 
TCGCTGCGCA ACGACATGTA CGGGCTAGAG ATTCCGGACG CGCTGCGCGG GCGCGAGTTC 
CGCGTGCTGG CACGATCCTT TTTTGAGAAG GACGTCACGC TCATCGGCAT CCTCAACGCG 
CGCAGCGTCG TGCAGCTCAA CCCTCGCGAG CTCGTGCCAA ACGCGAAGAA GCTCATCCTG 
ATCGCGAAGA CGATGAAGGT GGCACAGGAC GCCACCGACG CCATCGCGCG AGACCATGAG 
CAGACCTTTG GCGAGGAGAT GCTTGCGGCG CCGGACCCTG ATGAGCACGA CCGTGCGAAG 
CGGCGACGCG CAAGGTCTCG CTTCCTCGCC AGCCTCAGCA GCAGCAGCAG TAGTAGTAGT 
AGCGGTGTCG ACGGCGATGT TGGAGACCGC AACGGTGCGT CGAAGCAGCG TGGGGACCGG 
TGGCCGCGGC AGACCGCACA CGTCAGCGCG TCGCGGCCCG CGACGCCAAC GGCCACGACA 
ACCGACTCGC AGAGAACGCA GCCGGTGCGA CCACACGGTG CGGCAGCAGC GCTAGAGAAC 
GGCAACGACC TGGCGCGTGC CTTCCCCAGT GTAGTCTCGT TGCATCCCAG CGGCAGCTCC 
ATCGCCGCTG AGGACGACAG CGGCGACGAG TTTGACGCGA GGAGCCGCGT TGTCGCTGCC 
GCACCGTCGC CGCCGAGTTC CATGCGCGGA CCTCCGGTGC GCAGCGGGGC GCTGATGCGT 
ATCGACGACG CTTTCGACCT CGAGAACCAC TTCGTCGTCG TCGACCTGTC CTCCGCCAAG 
GCCAAGGACG AGTCCAGCCG CTACGCGCAG GAGGCTGTCA ACACCGCCGT CGCGCACGAC 
ATCTTCCACG TCACAATGCC AGTGCGTCAG GCGTACCCCG CCAACGACAT CGTGCTGCTC 
ACCAACGACG TCAGCTTCGG CCCCTACCTC GACTACTACT GGAGCGTGCA CCGCCAGAAC 
AGCGCCAACC CTGTCAAGTG CATCAGCGGC TGCGGCCTCA ATACCGCCGA CCTGCGCCGC 
TGCAACCTTG AGCGCTGCGC CGGCTGCTGC GTCTTCTACG CCGGCGACAT CAGCCGCTCC 
GGCTCCACCA GCGCCATGTC CATGCTTACC GTGCTGTCCA TAAACGAGAT CCTGCACGGC 
ATCCCGTCCT TCCCCGTCGT CGTCGAGCTC GAGGGCCTTG CCAACCTGCC TCTGTTCCCG 
CCGCACGCCG AGGACCCGCG CCTGCGCACG AAGGCGGACA TCGACTTTGT GTACGAGCCA 
AACTTCATCA TCGGCAACGC CGTCAGCCGC CTCATGCTGT TCCCCGCGCT GCAGCGCACC 
TACTTCATGG AGGAGTTCAT CGACGTCATG GACGTGCTCA TCAGCGGCCA CGCTCCCGAC 
ACGCCCGCGC TCGCGCGCCT GCCGCTGTCG CTGTGCCAGA CAGAGCTCCA GACCTACGAG 
GACGTCGTCG TCTACTGCCT CAAGTTCGGC TATCTGCCCA TCGCTCTGCA GCGCCGCATC 
GTCGACGTGC GCAACCCGTC CATCGACGGC CAGCGCTTCG TGCTCACGAA CCCGCCGCGC 
GCGCTGCCAG TGAACCAGCA GACGGACCTG CTCTTCTACA TCACGCCAGG GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_01_0830 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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