VPS41 cDNA ORF clone, Calidris pugnax(ruff)

Gene
Clones
gRNAs

Summary

Gene Symbol	VPS41
Entrez Gene ID	106890381
Full Name	VPS41, HOPS complex subunit
Gene Type	protein-coding
Organism	Calidris pugnax(ruff)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014946159.1	XP_014801645.1	vacuolar protein sorting-associated protein 41 homolog

Pathways from BioSystems
Gene Ontology

The following VPS41 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS41 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa68084	XM_014946159.1 Latest version!	Calidris pugnax VPS41 HOPS complex subunit (VPS41), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

VPS41 ( XM_014946159.1 ) cDNA ORF clone, Calidris pugnax(ruff) -> XP_014801645.1 Calidris pugnax VPS41 HOPS complex subunit (VPS41), mRNA.

Price & Availability↑

CloneID	OCa68084
Clone ID Related Accession (Same CDS sequence)	XM_014946159.1
Accession Version	XM_014946159.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2565bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-12-08
Organism	Calidris pugnax(ruff)
Product	vacuolar protein sorting-associated protein 41 homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090874.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGAAG CTGAGGAGAA GGAAACCAGG TCTAATGAGG AATCAACAGA TGAATCTGAG 
GAAGATGAGA GTGAAGAAGA ACCCAAGCTG AAGTATGAAC GGCTTTCCAA TGGAGTGACT 
GAAATTCTCC AGAAGGATGC AGCCAGCTGC ATGACAGTGC ATGAAAAGTT CTTGGCACTG 
GGAACACATT ATGGCAAAGT GTATTTACTT GATGTCCAAG GGAACATCAC ACAGAAGTTT 
GATGTTAGCC CAGTGAAGAT AAATCAGATC AGCCTGGATG AAAGTGGAGA ACACATGGGT 
GTTTGCTCAG AAGATGGCAA GGTGCAGGTG TTTGGATTGT ATTCGGCGGA AGAGTTTCAT 
GAAACATTTG ACTGCCCCAT TAAAATTGTT GCTGTTCATC CTCATTTTGT AAGATCCCAC 
TTCAAGCAAT TTGTAACGGG AGGGAAAAAG TTGCTGTTAT ATGAGAGAGG CTGGATGAAT 
AGATGGAAAC CTTCGGTTTT ACATGAAGGG GAAGGAAATA TAAGAAATGT GAAGTGGAGA 
GGACACTTGA TTGCTTGGGC CAATAATATG GGTGTGAAGA TACTTGACAT GATCTCCAAG 
CAAAGAATTA CCAATGTGCC TCGAGATGAC ATAAGCCTTC GCCCGGATAT GTATCCCTGC 
AGTCTTTGCT GGAAGGATAA TTTAACGCTG ATTATTGGCT GGGGGAATTC AGTAAAGATT 
TGCTCAGTAA AAGAACGACA TGCCAGTGAA ATGCGTGACC TTCCGAACCG CTATGTGGAA 
ATAGTTTTCC AGTTTGACAC CGAATTCTAT ATCAGTGGAC TTGCACCTCT CTGCGACCAG 
CTTGTTATAC TTTCATATGT AAAGGAGATT TCTGAAAAAA CGGAAGTGGA GTGTTGTGCA 
AGGCCTAGAC TGGACATTGT ACAACCCCTA CCCGAGTCCT GTGAAGAGAT CTCTTCTGAT 
GCACTAACAG TACGAGGATT TCAGGAAAAT GAATGTAGAG ATTATCATTT AGAGTATTCG 
GAAGGTGAAT CACTTTTTTA TATCATCAGC CCAAGAGATG TGGTTGTGGC TAAAGAGCGG 
GACCAAGATG ACCACATTGA CTGGCTTCTT GAGAAGAAGA AATACGAAGA AGCTTTGATG 
GCAGCTGAGA TCAGTCAGAA AACCATTAAA AAGCACAAGA TTTTGGACAT TGGCTTAGCC 
TATATAAATC ACCTAGTGGA GAAAGGAGAG TATGACCTGG CTGCCCGAAA GTGCCAGAAA 
ATTCTTGGCA AAAACACAGA ACTCTGGGAA TTTGAAGTTT ACAAGTTTAA AGAAATAGGT 
CAGCTTAAGG CAATTAGTCG TTACTTGCCC AGACGGGACC CAGTTTTGAA GCCTCTGATC 
TATGAAATGG TCCTGCATGA ATTTTTGGAG AGTGACTACG AGGGGTTTGC AACCCTGATA 
AAAGAGTGGC CTGGAGATCT CTACAACAAC ACAATCATAG TTCAAGCTGT AGTGGATCAC 
CTGAAGAAAG ATCCCCAGAA CAGGACTTTG CTACGAACAC TTGCAGAATT GTATACTTAC 
GACCAGCGCT ATGGCAGAGC CCTAGAAATT TACCTGACTC TGAGACATAA AGATGTCTTC 
CAGTTGATCC ACAAGCACAA TCTTTTCAGT TCTATCAGAG ACAAAATAGT TCTGCTCATG 
GATTTTGATT CAGAGAAAGC AGTAGACATG CTTTTGGATA ACGAAGATAA AATTTCCATT 
GACAGAGTTG TTGAAGAGTT AGAAAACAGG CCTGAGCTAC AGCATGTGTA TTTGCACAAG 
CTCTTCAAGA GAGACCACCA TAAAGGCCAG CGGTATCACG AGAAGCAGAT CAGTCTCTAC 
GCTGAGTACG ATCGCCCCAA TTTACTGCCC TTTCTCAGGG ACAGCACGCA CTGCCCGCTC 
GAGAAGGCTC TTGAGATCTG CCAACAGAGG AACTTTGTAG AAGAGACAGT CTATCTTCTG 
AGCCGAATGG GTAATAGCCG CAGTGCCTTG AAGATGATAA TGGAAGAGTT GCAAGATGTA 
GACAAAGCTA TTGAATTTGC CAAGGAACAA GATGATGGAG AGCTTTGGGA AGACCTCATT 
TTATATTCTA TCGACAAACC ACCTTTTATT ACTGGACTGT TGAACAATAT TGGAACCCAT 
GTTGATCCCA TTCTTTTGAT CCACCGCATT AAGGAAGGCA TGGAGATTCC AAATTTGAGA 
GACTCACTGG TGAAAATTCT TCAGGACTAC AACTTGCAGA TCTTGCTGCG GGAGGGTTGC 
AAGAAGATAC TTGTCGCTGA TTCTCTGTCT TTACTGAAGA AAATGCATCG AACTCAGATG 
AAGGGTGTTC TAGTAGACGA GGAGAATATC TGCGAATCCT GCCTGTCTCC AATACTTCCT 
GCAGATGCAT CCAAGTCCTT CAATGTGGTC GTGTTCCACT GCAGGCATAT GTTTCACAAG 
GAGTGCCTCC CAGTATCTAA CACGGTATCT CCTGTCCAGT TCTGCAACAT ATGCAGTGCC 
AAGCACCGAG GACCAGGAAG TGCAATCCTG GAGATGAAGA AATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014801645.1
CDS	30..2594
Translation	MAEAEEKETRSNEESTDESEEDESEEEPKLKYERLSNGVTEILQKDAASCMTVHEKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSAEEFHETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKPSVLHEGEGNIRNVKWRGHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTLIIGWGNSVKICSVKERHASEMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVILSYVKEISEKTEVECCARPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIISPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGEYDLAARKCQKILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHEFLESDYEGFATLIKEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRTLAELYTYDQRYGRALEIYLTLRHKDVFQLIHKHNLFSSIRDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELQDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPILPADASKSFNVVVFHCRHMFHKECLPVSNTVSPVQFCNICSAKHRGPGSAILEMKK

Target ORF information:

RefSeq Version	XM_014946159.1
Organism	Calidris pugnax(ruff)
Definition	Calidris pugnax VPS41 HOPS complex subunit (VPS41), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014946159.1

ORF Insert Sequence:

ATGGCGGAAG CTGAGGAGAA GGAAACCAGG TCTAATGAGG AATCAACAGA TGAATCTGAG 
GAAGATGAGA GTGAAGAAGA ACCCAAGCTG AAGTATGAAC GGCTTTCCAA TGGAGTGACT 
GAAATTCTCC AGAAGGATGC AGCCAGCTGC ATGACAGTGC ATGAAAAGTT CTTGGCACTG 
GGAACACATT ATGGCAAAGT GTATTTACTT GATGTCCAAG GGAACATCAC ACAGAAGTTT 
GATGTTAGCC CAGTGAAGAT AAATCAGATC AGCCTGGATG AAAGTGGAGA ACACATGGGT 
GTTTGCTCAG AAGATGGCAA GGTGCAGGTG TTTGGATTGT ATTCGGCGGA AGAGTTTCAT 
GAAACATTTG ACTGCCCCAT TAAAATTGTT GCTGTTCATC CTCATTTTGT AAGATCCCAC 
TTCAAGCAAT TTGTAACGGG AGGGAAAAAG TTGCTGTTAT ATGAGAGAGG CTGGATGAAT 
AGATGGAAAC CTTCGGTTTT ACATGAAGGG GAAGGAAATA TAAGAAATGT GAAGTGGAGA 
GGACACTTGA TTGCTTGGGC CAATAATATG GGTGTGAAGA TACTTGACAT GATCTCCAAG 
CAAAGAATTA CCAATGTGCC TCGAGATGAC ATAAGCCTTC GCCCGGATAT GTATCCCTGC 
AGTCTTTGCT GGAAGGATAA TTTAACGCTG ATTATTGGCT GGGGGAATTC AGTAAAGATT 
TGCTCAGTAA AAGAACGACA TGCCAGTGAA ATGCGTGACC TTCCGAACCG CTATGTGGAA 
ATAGTTTTCC AGTTTGACAC CGAATTCTAT ATCAGTGGAC TTGCACCTCT CTGCGACCAG 
CTTGTTATAC TTTCATATGT AAAGGAGATT TCTGAAAAAA CGGAAGTGGA GTGTTGTGCA 
AGGCCTAGAC TGGACATTGT ACAACCCCTA CCCGAGTCCT GTGAAGAGAT CTCTTCTGAT 
GCACTAACAG TACGAGGATT TCAGGAAAAT GAATGTAGAG ATTATCATTT AGAGTATTCG 
GAAGGTGAAT CACTTTTTTA TATCATCAGC CCAAGAGATG TGGTTGTGGC TAAAGAGCGG 
GACCAAGATG ACCACATTGA CTGGCTTCTT GAGAAGAAGA AATACGAAGA AGCTTTGATG 
GCAGCTGAGA TCAGTCAGAA AACCATTAAA AAGCACAAGA TTTTGGACAT TGGCTTAGCC 
TATATAAATC ACCTAGTGGA GAAAGGAGAG TATGACCTGG CTGCCCGAAA GTGCCAGAAA 
ATTCTTGGCA AAAACACAGA ACTCTGGGAA TTTGAAGTTT ACAAGTTTAA AGAAATAGGT 
CAGCTTAAGG CAATTAGTCG TTACTTGCCC AGACGGGACC CAGTTTTGAA GCCTCTGATC 
TATGAAATGG TCCTGCATGA ATTTTTGGAG AGTGACTACG AGGGGTTTGC AACCCTGATA 
AAAGAGTGGC CTGGAGATCT CTACAACAAC ACAATCATAG TTCAAGCTGT AGTGGATCAC 
CTGAAGAAAG ATCCCCAGAA CAGGACTTTG CTACGAACAC TTGCAGAATT GTATACTTAC 
GACCAGCGCT ATGGCAGAGC CCTAGAAATT TACCTGACTC TGAGACATAA AGATGTCTTC 
CAGTTGATCC ACAAGCACAA TCTTTTCAGT TCTATCAGAG ACAAAATAGT TCTGCTCATG 
GATTTTGATT CAGAGAAAGC AGTAGACATG CTTTTGGATA ACGAAGATAA AATTTCCATT 
GACAGAGTTG TTGAAGAGTT AGAAAACAGG CCTGAGCTAC AGCATGTGTA TTTGCACAAG 
CTCTTCAAGA GAGACCACCA TAAAGGCCAG CGGTATCACG AGAAGCAGAT CAGTCTCTAC 
GCTGAGTACG ATCGCCCCAA TTTACTGCCC TTTCTCAGGG ACAGCACGCA CTGCCCGCTC 
GAGAAGGCTC TTGAGATCTG CCAACAGAGG AACTTTGTAG AAGAGACAGT CTATCTTCTG 
AGCCGAATGG GTAATAGCCG CAGTGCCTTG AAGATGATAA TGGAAGAGTT GCAAGATGTA 
GACAAAGCTA TTGAATTTGC CAAGGAACAA GATGATGGAG AGCTTTGGGA AGACCTCATT 
TTATATTCTA TCGACAAACC ACCTTTTATT ACTGGACTGT TGAACAATAT TGGAACCCAT 
GTTGATCCCA TTCTTTTGAT CCACCGCATT AAGGAAGGCA TGGAGATTCC AAATTTGAGA 
GACTCACTGG TGAAAATTCT TCAGGACTAC AACTTGCAGA TCTTGCTGCG GGAGGGTTGC 
AAGAAGATAC TTGTCGCTGA TTCTCTGTCT TTACTGAAGA AAATGCATCG AACTCAGATG 
AAGGGTGTTC TAGTAGACGA GGAGAATATC TGCGAATCCT GCCTGTCTCC AATACTTCCT 
GCAGATGCAT CCAAGTCCTT CAATGTGGTC GTGTTCCACT GCAGGCATAT GTTTCACAAG 
GAGTGCCTCC CAGTATCTAA CACGGTATCT CCTGTCCAGT TCTGCAACAT ATGCAGTGCC 
AAGCACCGAG GACCAGGAAG TGCAATCCTG GAGATGAAGA AATAG