Gene Symbol | Sidt1 |
Entrez Gene ID | 320007 |
Full Name | SID1 transmembrane family, member 1 |
Synonyms | AW045928,B830021E24Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Sidt1 cDNA ORF clone
Gene Symbol | Sidt1 |
Entrez Gene ID | 320007 |
Full Name | SID1 transmembrane family, member 1 |
Synonyms | AW045928,B830021E24Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006522237.1 | XP_006522300.1 | SID1 transmembrane family member 1 isoform X2 |
XM_006522237.2 | XP_006522300.1 | SID1 transmembrane family member 1 isoform X2 |
NM_001159419.1 | NP_001152891.1 | SID1 transmembrane family member 1 isoform 1 precursor |
XM_017317034.1 | XP_017172523.1 | SID1 transmembrane family member 1 isoform X1 |
XM_017317034.2 | XP_017172523.1 | SID1 transmembrane family member 1 isoform X1 |
NM_198034.3 | NP_932151.2 | SID1 transmembrane family member 1 isoform 2 precursor |
SIDT1 | XP_002802698.1 | |
Rattus norvegicus (Norway rat) | Sidt1 | NP_001094123.1 |
Gallus gallus (chicken) | SIDT1 | XP_004938216.1 |
Canis lupus familiaris (dog) | SIDT1 | XP_003434142.2 |
Bos taurus (cattle) | SIDT1 | NP_001192562.1 |
Homo sapiens (human) | SIDT1 | NP_060169.2 |
Pan troglodytes (chimpanzee) | SIDT1 | XP_003950210.1 |
Mus musculus (house mouse) | Sidt1 | NP_001152891.1 |
Xenopus tropicalis (tropical clawed frog) | sidt1 | XP_002941891.1 |
High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)
Systemic RNA Interference Deficiency-1 (SID-1) Extracellular Domain Selectively Binds Long Double-stranded RNA and Is Required for RNA Transport by SID-1.
Li W, Koutmou KS, Leahy DJ, Li M
The Journal of biological chemistry290(31)18904-13(2015 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Sidt1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sidt1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu52187 | |
Clone ID Related Accession (Same CDS sequence) | XM_006522237.1 , XM_006522237.2 | |
Accession Version | XM_006522237.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1839bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | SID1 transmembrane family member 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTCCAG TGTATGATCT GGACCACAAT GTGGAATTCA ATGGTGTCTA TCAGTCCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006522300.1 |
CDS | 381..2219 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006522237.1 |
1 | ATGTGTCCAG TGTATGATCT GGACCACAAT GTGGAATTCA ATGGTGTCTA TCAGTCCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu07453 | |
Clone ID Related Accession (Same CDS sequence) | NM_001159419.1 | |
Accession Version | NM_001159419.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2499bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-20 | |
Organism | Mus musculus(house mouse) | |
Product | SID1 transmembrane family member 1 isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC079584.1, AY562214.1 and AK034344.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: SRR1660817.62584.1, AK046836.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001152891.1 |
CDS | 311..2809 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001159419.1 |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08846 | |
Clone ID Related Accession (Same CDS sequence) | NM_198034.3 | |
Accession Version | NM_198034.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2484bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-19 | |
Organism | Mus musculus(house mouse) | |
Product | SID1 transmembrane family member 1 isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC079584.1. On Apr 16, 2009 this sequence version replaced NM_198034.2. Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC079584.1, AK171920.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_932151.2 |
CDS | 311..2794 |
Translation |
Target ORF information:
Target ORF information:
|
NM_198034.3 |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu52187 | |
Clone ID Related Accession (Same CDS sequence) | XM_006522237.1 , XM_006522237.2 | |
Accession Version | XM_006522237.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1839bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | SID1 transmembrane family member 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006522237.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTCCAG TGTATGATCT GGACCACAAT GTGGAATTCA ATGGTGTCTA TCAGTCCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006522300.1 |
CDS | 1052..2890 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006522237.2 |
1 | ATGTGTCCAG TGTATGATCT GGACCACAAT GTGGAATTCA ATGGTGTCTA TCAGTCCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu79351 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317034.1 , XM_017317034.2 | |
Accession Version | XM_017317034.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2328bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | SID1 transmembrane family member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017172523.1 |
CDS | 785..3112 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017317034.1 |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu79351 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317034.1 , XM_017317034.2 | |
Accession Version | XM_017317034.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2328bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | SID1 transmembrane family member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017317034.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017172523.1 |
CDS | 685..3012 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017317034.2 |
1 | ATGCTGGACT GCCTGCGCCT GGCGCTGCTC TGCGCGCTGC CCTGGCTCCT GCGGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
High-throughput discovery of novel developmental phenotypes. |
Systemic RNA Interference Deficiency-1 (SID-1) Extracellular Domain Selectively Binds Long Double-stranded RNA and Is Required for RNA Transport by SID-1. |