ORF » Species Summary » Populus trichocarpa » LOC7464709 cDNA ORF clone

LOC7464709 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7464709 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7464709 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27632 XM_002319914.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0013s14820g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00
OPa441479 XM_024583235.1
Latest version!		 Populus trichocarpa pentatricopeptide repeat-containing protein At3g12770 (LOC7464709), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa441479 XM_002319914.3
Latest version!		 Populus trichocarpa pentatricopeptide repeat-containing protein At3g12770 (LOC7464709), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7464709 ( XM_002319914.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002319950.1 Populus trichocarpa hypothetical protein (POPTR_0013s14820g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27632
    Clone ID Related Accession (Same CDS sequence) XM_002319914.2
    Accession Version XM_002319914.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2241bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). On Dec 16, 2013 this sequence version replaced XM_002319914.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCAAAGT CTCTGCCATT TCTTACAAGG CCTCCAAACA AAGTCTCCTC TTTTATTGCT 
    CTCTGTCCCC AACCCTTTAA AATTCGACCG TTGGATCCTC CTCCATTTAG ATTTCCCGCC 
    TCCACTCTCA AATTCCTCGA AACCCATTAT TCTTCATCTC TCAATTTAAC AACCCACTTC 
    AACAACAACA AGGATGACTG CAATGAAAGT ACCTTCAAAC CTGACAAATT CTACGCGTCA 
    TTAATCGATG ATTCGATACA CAAAACCCAC TTGAACCAAA TCTATGCTAA GTTATTAGTA 
    ACGGGGTTGC AATATGGTGG TTTCTTGATA GCAAAATTAG TTAACAAGGC TTCGAATATA 
    GGAGAAGTTA GCTGTGCACG TAAGTTGTTT GATAAATTTC CTGACCCAGA CGTGTTTTTG 
    TGGAATGCGA TTGTTAGGTG TTATTCTAGG CATGGTTTCT TTGGTCATGC TATTGAAATG 
    TATGCAAGAA TGCAAGTTGC GTGTGTTAGT CCTGATGGGT TCAGTTTTCC TTGTGTTCTC 
    AAAGCTTGCA GTGCCTTGCC GGCTCTTGAA ATGGGGAGGA GGGTACATGG GCAGATATTT 
    AGACATGGGT TTGAATCGGA TGTGTTTGTG CAGAACGGTC TTGTGGCATT GTATGCAAAA 
    TGTGGAGAGA TTGTGCGAGC TAATGCTGTT TTTGGTAGGC TAGTTGATAG GACTATTGTT 
    TCTTGGACCT CGATTATTTC TGGGTATGCG CAGAATGGAC AGCCTATTGA AGCCTTGCGG 
    ATTTTTAGTG AAATGAGGAA AACAAATGTG AGACCAGATT GGATAGCGCT TGTGAGCGTT 
    CTTAGAGCAT ATACAGATGT AGAGGATTTG GAACATGGGA AATCTATTCA TGGTTGCGTG 
    ATTAAAATGG GACTTGAATG TGAATTTGAT TTGCTCATTT CTCTTACCTC TTTGTATGCA 
    AAATGTGGGC ACGTTATGGT TGCTAGATTA TTTTTTAACC AGGTGGAGAA CCCAAGTTTG 
    ATATTTTGGA ATGCAATGAT TTCTGGTTAT GTGAAAAATG GGTATGCCGA GGAAGCTATT 
    GAACTGTTCC GTCTAATGAA AAGTAAAAAT ATAAGACCAG ATTCTATTAC TGTGACTTCT 
    AGCATTGCAG CTTGTGCACA AATAGGTTCT CTTGAATTAG CAAGATGGAT GGATGAGTAT 
    ATCAGCATGA GTGAGTTTAG AAATGATGTG ATTGTCAATA CTTCCCTCAT TGACACGTAT 
    GCAAAATGTG GAAGTGTAGA TATGGCTCGC TTTGTTTTTG ACAGAATACC AGATAAAGAT 
    GTTGTTGTGT GGAGTGCGAT GATGGTGGGA TATGGATTAC ATGGGCAAGG TCGGGAATCT 
    ATCATTCTTT TTCATGCAAT GAGGCAAGCT GGGGTGTCCC CAAATGATGT CACCTTTGTT 
    GGGCTCCTCA CAGCATGCAA AAATTCAGGT CTTGTAGAAG AAGGTTGGGA CCTCTTCCAC 
    CGCATGAGAG ATTATGGGAT TGAACCAAGG CACCAACATT ATGCATGTGT GGTGGATCTT 
    CTTGGGCGTG CAGGCCATTT AGATCGAGCT TATAATTTTG TCATGAACAT GCCAATTGAA 
    CCAGGTGTAA GTGTGTGGGG AGCCCTTTTG AGTGCATGCA AGATCCATCG CCATGTGACA 
    CTAGGGGAGT ATGCAGCTGA ACGACTTTTC TCATTAGATC CATACAACAC GGGGCATTAT 
    GTTCAGCTGT CAAACCTCTA TGCTTCTTCT TGCTTATGGG ATTGTGTTGC AAAGGTACGG 
    GTGTTAATGA GGGAGAAAGG ACTTACTAAG CACCTTGGTT ATAGTGTGAT TGAGATCAAT 
    GGAAAGCTCC AGGCATTTCA GGCTGGAGAT AAGACGCATC CAAGATCCAA AGAGATTTTT 
    GAGGAAGTTG AGGATTTAGA GAGAAGATTA AAGGAAGCTG GATTTGTCCC CCATACAGAA 
    TCTGTCCTGC ATGATTTGAA TTATGAGGAA ACAGAGGAGA CACTTTGTAA TCATAGTGAG 
    AGACTAGCGA TTGCTTATGG CCTCATCAGT ACTCCCCCTG GAACAACCCT TAGGATAACA 
    AAGAATCTTC GGGCATGCGA CAACTGTCAT GCTGCAATCA AGCTCATCTC AAAGCTGGTA 
    AGTAGGGAGA TAGTTGTCAG GGATGCATGT CGTTTCCATC ATTTTAAGGA TGGAGCTTGT 
    TCCTGTGGAG ATTATTGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319950.1
    CDS1..2241
    Translation

    Target ORF information:

    RefSeq Version XM_002319914.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s14820g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319914.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCAAAGT CTCTGCCATT TCTTACAAGG CCTCCAAACA AAGTCTCCTC TTTTATTGCT 
    CTCTGTCCCC AACCCTTTAA AATTCGACCG TTGGATCCTC CTCCATTTAG ATTTCCCGCC 
    TCCACTCTCA AATTCCTCGA AACCCATTAT TCTTCATCTC TCAATTTAAC AACCCACTTC 
    AACAACAACA AGGATGACTG CAATGAAAGT ACCTTCAAAC CTGACAAATT CTACGCGTCA 
    TTAATCGATG ATTCGATACA CAAAACCCAC TTGAACCAAA TCTATGCTAA GTTATTAGTA 
    ACGGGGTTGC AATATGGTGG TTTCTTGATA GCAAAATTAG TTAACAAGGC TTCGAATATA 
    GGAGAAGTTA GCTGTGCACG TAAGTTGTTT GATAAATTTC CTGACCCAGA CGTGTTTTTG 
    TGGAATGCGA TTGTTAGGTG TTATTCTAGG CATGGTTTCT TTGGTCATGC TATTGAAATG 
    TATGCAAGAA TGCAAGTTGC GTGTGTTAGT CCTGATGGGT TCAGTTTTCC TTGTGTTCTC 
    AAAGCTTGCA GTGCCTTGCC GGCTCTTGAA ATGGGGAGGA GGGTACATGG GCAGATATTT 
    AGACATGGGT TTGAATCGGA TGTGTTTGTG CAGAACGGTC TTGTGGCATT GTATGCAAAA 
    TGTGGAGAGA TTGTGCGAGC TAATGCTGTT TTTGGTAGGC TAGTTGATAG GACTATTGTT 
    TCTTGGACCT CGATTATTTC TGGGTATGCG CAGAATGGAC AGCCTATTGA AGCCTTGCGG 
    ATTTTTAGTG AAATGAGGAA AACAAATGTG AGACCAGATT GGATAGCGCT TGTGAGCGTT 
    CTTAGAGCAT ATACAGATGT AGAGGATTTG GAACATGGGA AATCTATTCA TGGTTGCGTG 
    ATTAAAATGG GACTTGAATG TGAATTTGAT TTGCTCATTT CTCTTACCTC TTTGTATGCA 
    AAATGTGGGC ACGTTATGGT TGCTAGATTA TTTTTTAACC AGGTGGAGAA CCCAAGTTTG 
    ATATTTTGGA ATGCAATGAT TTCTGGTTAT GTGAAAAATG GGTATGCCGA GGAAGCTATT 
    GAACTGTTCC GTCTAATGAA AAGTAAAAAT ATAAGACCAG ATTCTATTAC TGTGACTTCT 
    AGCATTGCAG CTTGTGCACA AATAGGTTCT CTTGAATTAG CAAGATGGAT GGATGAGTAT 
    ATCAGCATGA GTGAGTTTAG AAATGATGTG ATTGTCAATA CTTCCCTCAT TGACACGTAT 
    GCAAAATGTG GAAGTGTAGA TATGGCTCGC TTTGTTTTTG ACAGAATACC AGATAAAGAT 
    GTTGTTGTGT GGAGTGCGAT GATGGTGGGA TATGGATTAC ATGGGCAAGG TCGGGAATCT 
    ATCATTCTTT TTCATGCAAT GAGGCAAGCT GGGGTGTCCC CAAATGATGT CACCTTTGTT 
    GGGCTCCTCA CAGCATGCAA AAATTCAGGT CTTGTAGAAG AAGGTTGGGA CCTCTTCCAC 
    CGCATGAGAG ATTATGGGAT TGAACCAAGG CACCAACATT ATGCATGTGT GGTGGATCTT 
    CTTGGGCGTG CAGGCCATTT AGATCGAGCT TATAATTTTG TCATGAACAT GCCAATTGAA 
    CCAGGTGTAA GTGTGTGGGG AGCCCTTTTG AGTGCATGCA AGATCCATCG CCATGTGACA 
    CTAGGGGAGT ATGCAGCTGA ACGACTTTTC TCATTAGATC CATACAACAC GGGGCATTAT 
    GTTCAGCTGT CAAACCTCTA TGCTTCTTCT TGCTTATGGG ATTGTGTTGC AAAGGTACGG 
    GTGTTAATGA GGGAGAAAGG ACTTACTAAG CACCTTGGTT ATAGTGTGAT TGAGATCAAT 
    GGAAAGCTCC AGGCATTTCA GGCTGGAGAT AAGACGCATC CAAGATCCAA AGAGATTTTT 
    GAGGAAGTTG AGGATTTAGA GAGAAGATTA AAGGAAGCTG GATTTGTCCC CCATACAGAA 
    TCTGTCCTGC ATGATTTGAA TTATGAGGAA ACAGAGGAGA CACTTTGTAA TCATAGTGAG 
    AGACTAGCGA TTGCTTATGG CCTCATCAGT ACTCCCCCTG GAACAACCCT TAGGATAACA 
    AAGAATCTTC GGGCATGCGA CAACTGTCAT GCTGCAATCA AGCTCATCTC AAAGCTGGTA 
    AGTAGGGAGA TAGTTGTCAG GGATGCATGT CGTTTCCATC ATTTTAAGGA TGGAGCTTGT 
    TCCTGTGGAG ATTATTGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7464709 ( XM_002319914.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002319950.2 Populus trichocarpa pentatricopeptide repeat-containing protein At3g12770 (LOC7464709), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa441479
    Clone ID Related Accession (Same CDS sequence) XM_002319914.3 , XM_024583235.1
    Accession Version XM_002319914.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2241bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product pentatricopeptide repeat-containing protein At3g12770
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002319914.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCAAAGT CTCTGCCATT TCTTACAAGG CCTCCAAACA AAGTCTCCTC TTTTATTGCT 
    CTCTGTCCCC AACCCTTTAA AATTCGACCG TTGGATCCTC CTCCATTTAG ATTTCCCGCC 
    TCCACTCTCA AATTCCTCGA AACCCATTAT TCTTCATCTC TCAATTTAAC AACCCACTTC 
    AACAACAACA AGGATGACTG CAATGAAAGT ACCTTCAAAC CTGACAAATT CTACGCGTCA 
    TTAATCGATG ATTCGATACA CAAAACCCAC TTGAACCAAA TCTATGCTAA GTTATTAGTA 
    ACGGGGTTGC AATATGGTGG TTTCTTGATA GCAAAATTAG TTAACAAGGC TTCGAATATA 
    GGAGAAGTTA GCTGTGCACG TAAGTTGTTT GATAAATTTC CTGACCCAGA CGTGTTTTTG 
    TGGAATGCGA TTGTTAGGTG TTATTCTAGG CATGGTTTCT TTGGTCATGC TATTGAAATG 
    TATGCAAGAA TGCAAGTTGC GTGTGTTAGT CCTGATGGGT TCAGTTTTCC TTGTGTTCTC 
    AAAGCTTGCA GTGCCTTGCC GGCTCTTGAA ATGGGGAGGA GGGTACATGG GCAGATATTT 
    AGACATGGGT TTGAATCGGA TGTGTTTGTG CAGAACGGTC TTGTGGCATT GTATGCAAAA 
    TGTGGAGAGA TTGTGCGAGC TAATGCTGTT TTTGGTAGGC TAGTTGATAG GACTATTGTT 
    TCTTGGACCT CGATTATTTC TGGGTATGCG CAGAATGGAC AGCCTATTGA AGCCTTGCGG 
    ATTTTTAGTG AAATGAGGAA AACAAATGTG AGACCAGATT GGATAGCGCT TGTGAGCGTT 
    CTTAGAGCAT ATACAGATGT AGAGGATTTG GAACATGGGA AATCTATTCA TGGTTGCGTG 
    ATTAAAATGG GACTTGAATG TGAATTTGAT TTGCTCATTT CTCTTACCTC TTTGTATGCA 
    AAATGTGGGC ACGTTATGGT TGCTAGATTA TTTTTTAACC AGGTGGAGAA CCCAAGTTTG 
    ATATTTTGGA ATGCAATGAT TTCTGGTTAT GTGAAAAATG GGTATGCCGA GGAAGCTATT 
    GAACTGTTCC GTCTAATGAA AAGTAAAAAT ATAAGACCAG ATTCTATTAC TGTGACTTCT 
    AGCATTGCAG CTTGTGCACA AATAGGTTCT CTTGAATTAG CAAGATGGAT GGATGAGTAT 
    ATCAGCATGA GTGAGTTTAG AAATGATGTG ATTGTCAATA CTTCCCTCAT TGACACGTAT 
    GCAAAATGTG GAAGTGTAGA TATGGCTCGC TTTGTTTTTG ACAGAATACC AGATAAAGAT 
    GTTGTTGTGT GGAGTGCGAT GATGGTGGGA TATGGATTAC ATGGGCAAGG TCGGGAATCT 
    ATCATTCTTT TTCATGCAAT GAGGCAAGCT GGGGTGTCCC CAAATGATGT CACCTTTGTT 
    GGGCTCCTCA CAGCATGCAA AAATTCAGGT CTTGTAGAAG AAGGTTGGGA CCTCTTCCAC 
    CGCATGAGAG ATTATGGGAT TGAACCAAGG CACCAACATT ATGCATGTGT GGTGGATCTT 
    CTTGGGCGTG CAGGCCATTT AGATCGAGCT TATAATTTTG TCATGAACAT GCCAATTGAA 
    CCAGGTGTAA GTGTGTGGGG AGCCCTTTTG AGTGCATGCA AGATCCATCG CCATGTGACA 
    CTAGGGGAGT ATGCAGCTGA ACGACTTTTC TCATTAGATC CATACAACAC GGGGCATTAT 
    GTTCAGCTGT CAAACCTCTA TGCTTCTTCT CGCTTATGGG ATTGTGTTGC AAAGGTACGG 
    GTGTTAATGA GGGAGAAAGG ACTTACTAAG CACCTTGGTT ATAGTGTGAT TGAGATCAAT 
    GGAAAGCTCC AGGCATTTCA GGCTGGAGAT AAGACGCATC CAAGATCCAA AGAGATTTTT 
    GAGGAAGTTG AGGATTTAGA GAGAAGATTA AAGGAAGCTG GATTTGTCCC CCATACAGAA 
    TCTGTCCTGC ATGATTTGAA TTATGAGGAA ACAGAGGAGA CACTTTGTAA TCATAGTGAG 
    AGACTAGCGA TTGCTTATGG CCTCATCAGT ACTCCCCCTG GAACAACCCT TAGGATAACA 
    AAGAATCTTC GGGCATGCGA CAACTGTCAT GCTGCAATCA AGCTCATCTC AAAGCTGGTA 
    AGTAGGGAGA TAGTTGTCAG GGATGCATGT CGTTTCCATC ATTTTAAGGA TGGAGCTTGT 
    TCCTGTGGAG ATTATTGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319950.2
    CDS88..2328
    Translation

    Target ORF information:

    RefSeq Version XM_002319914.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pentatricopeptide repeat-containing protein At3g12770 (LOC7464709), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319914.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCAAAGT CTCTGCCATT TCTTACAAGG CCTCCAAACA AAGTCTCCTC TTTTATTGCT 
    CTCTGTCCCC AACCCTTTAA AATTCGACCG TTGGATCCTC CTCCATTTAG ATTTCCCGCC 
    TCCACTCTCA AATTCCTCGA AACCCATTAT TCTTCATCTC TCAATTTAAC AACCCACTTC 
    AACAACAACA AGGATGACTG CAATGAAAGT ACCTTCAAAC CTGACAAATT CTACGCGTCA 
    TTAATCGATG ATTCGATACA CAAAACCCAC TTGAACCAAA TCTATGCTAA GTTATTAGTA 
    ACGGGGTTGC AATATGGTGG TTTCTTGATA GCAAAATTAG TTAACAAGGC TTCGAATATA 
    GGAGAAGTTA GCTGTGCACG TAAGTTGTTT GATAAATTTC CTGACCCAGA CGTGTTTTTG 
    TGGAATGCGA TTGTTAGGTG TTATTCTAGG CATGGTTTCT TTGGTCATGC TATTGAAATG 
    TATGCAAGAA TGCAAGTTGC GTGTGTTAGT CCTGATGGGT TCAGTTTTCC TTGTGTTCTC 
    AAAGCTTGCA GTGCCTTGCC GGCTCTTGAA ATGGGGAGGA GGGTACATGG GCAGATATTT 
    AGACATGGGT TTGAATCGGA TGTGTTTGTG CAGAACGGTC TTGTGGCATT GTATGCAAAA 
    TGTGGAGAGA TTGTGCGAGC TAATGCTGTT TTTGGTAGGC TAGTTGATAG GACTATTGTT 
    TCTTGGACCT CGATTATTTC TGGGTATGCG CAGAATGGAC AGCCTATTGA AGCCTTGCGG 
    ATTTTTAGTG AAATGAGGAA AACAAATGTG AGACCAGATT GGATAGCGCT TGTGAGCGTT 
    CTTAGAGCAT ATACAGATGT AGAGGATTTG GAACATGGGA AATCTATTCA TGGTTGCGTG 
    ATTAAAATGG GACTTGAATG TGAATTTGAT TTGCTCATTT CTCTTACCTC TTTGTATGCA 
    AAATGTGGGC ACGTTATGGT TGCTAGATTA TTTTTTAACC AGGTGGAGAA CCCAAGTTTG 
    ATATTTTGGA ATGCAATGAT TTCTGGTTAT GTGAAAAATG GGTATGCCGA GGAAGCTATT 
    GAACTGTTCC GTCTAATGAA AAGTAAAAAT ATAAGACCAG ATTCTATTAC TGTGACTTCT 
    AGCATTGCAG CTTGTGCACA AATAGGTTCT CTTGAATTAG CAAGATGGAT GGATGAGTAT 
    ATCAGCATGA GTGAGTTTAG AAATGATGTG ATTGTCAATA CTTCCCTCAT TGACACGTAT 
    GCAAAATGTG GAAGTGTAGA TATGGCTCGC TTTGTTTTTG ACAGAATACC AGATAAAGAT 
    GTTGTTGTGT GGAGTGCGAT GATGGTGGGA TATGGATTAC ATGGGCAAGG TCGGGAATCT 
    ATCATTCTTT TTCATGCAAT GAGGCAAGCT GGGGTGTCCC CAAATGATGT CACCTTTGTT 
    GGGCTCCTCA CAGCATGCAA AAATTCAGGT CTTGTAGAAG AAGGTTGGGA CCTCTTCCAC 
    CGCATGAGAG ATTATGGGAT TGAACCAAGG CACCAACATT ATGCATGTGT GGTGGATCTT 
    CTTGGGCGTG CAGGCCATTT AGATCGAGCT TATAATTTTG TCATGAACAT GCCAATTGAA 
    CCAGGTGTAA GTGTGTGGGG AGCCCTTTTG AGTGCATGCA AGATCCATCG CCATGTGACA 
    CTAGGGGAGT ATGCAGCTGA ACGACTTTTC TCATTAGATC CATACAACAC GGGGCATTAT 
    GTTCAGCTGT CAAACCTCTA TGCTTCTTCT CGCTTATGGG ATTGTGTTGC AAAGGTACGG 
    GTGTTAATGA GGGAGAAAGG ACTTACTAAG CACCTTGGTT ATAGTGTGAT TGAGATCAAT 
    GGAAAGCTCC AGGCATTTCA GGCTGGAGAT AAGACGCATC CAAGATCCAA AGAGATTTTT 
    GAGGAAGTTG AGGATTTAGA GAGAAGATTA AAGGAAGCTG GATTTGTCCC CCATACAGAA 
    TCTGTCCTGC ATGATTTGAA TTATGAGGAA ACAGAGGAGA CACTTTGTAA TCATAGTGAG 
    AGACTAGCGA TTGCTTATGG CCTCATCAGT ACTCCCCCTG GAACAACCCT TAGGATAACA 
    AAGAATCTTC GGGCATGCGA CAACTGTCAT GCTGCAATCA AGCTCATCTC AAAGCTGGTA 
    AGTAGGGAGA TAGTTGTCAG GGATGCATGT CGTTTCCATC ATTTTAAGGA TGGAGCTTGT 
    TCCTGTGGAG ATTATTGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7464709 ( XM_024583235.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024439003.1 Populus trichocarpa pentatricopeptide repeat-containing protein At3g12770 (LOC7464709), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa441479
    Clone ID Related Accession (Same CDS sequence) XM_002319914.3 , XM_024583235.1
    Accession Version XM_024583235.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2241bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product pentatricopeptide repeat-containing protein At3g12770
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCAAAGT CTCTGCCATT TCTTACAAGG CCTCCAAACA AAGTCTCCTC TTTTATTGCT 
    CTCTGTCCCC AACCCTTTAA AATTCGACCG TTGGATCCTC CTCCATTTAG ATTTCCCGCC 
    TCCACTCTCA AATTCCTCGA AACCCATTAT TCTTCATCTC TCAATTTAAC AACCCACTTC 
    AACAACAACA AGGATGACTG CAATGAAAGT ACCTTCAAAC CTGACAAATT CTACGCGTCA 
    TTAATCGATG ATTCGATACA CAAAACCCAC TTGAACCAAA TCTATGCTAA GTTATTAGTA 
    ACGGGGTTGC AATATGGTGG TTTCTTGATA GCAAAATTAG TTAACAAGGC TTCGAATATA 
    GGAGAAGTTA GCTGTGCACG TAAGTTGTTT GATAAATTTC CTGACCCAGA CGTGTTTTTG 
    TGGAATGCGA TTGTTAGGTG TTATTCTAGG CATGGTTTCT TTGGTCATGC TATTGAAATG 
    TATGCAAGAA TGCAAGTTGC GTGTGTTAGT CCTGATGGGT TCAGTTTTCC TTGTGTTCTC 
    AAAGCTTGCA GTGCCTTGCC GGCTCTTGAA ATGGGGAGGA GGGTACATGG GCAGATATTT 
    AGACATGGGT TTGAATCGGA TGTGTTTGTG CAGAACGGTC TTGTGGCATT GTATGCAAAA 
    TGTGGAGAGA TTGTGCGAGC TAATGCTGTT TTTGGTAGGC TAGTTGATAG GACTATTGTT 
    TCTTGGACCT CGATTATTTC TGGGTATGCG CAGAATGGAC AGCCTATTGA AGCCTTGCGG 
    ATTTTTAGTG AAATGAGGAA AACAAATGTG AGACCAGATT GGATAGCGCT TGTGAGCGTT 
    CTTAGAGCAT ATACAGATGT AGAGGATTTG GAACATGGGA AATCTATTCA TGGTTGCGTG 
    ATTAAAATGG GACTTGAATG TGAATTTGAT TTGCTCATTT CTCTTACCTC TTTGTATGCA 
    AAATGTGGGC ACGTTATGGT TGCTAGATTA TTTTTTAACC AGGTGGAGAA CCCAAGTTTG 
    ATATTTTGGA ATGCAATGAT TTCTGGTTAT GTGAAAAATG GGTATGCCGA GGAAGCTATT 
    GAACTGTTCC GTCTAATGAA AAGTAAAAAT ATAAGACCAG ATTCTATTAC TGTGACTTCT 
    AGCATTGCAG CTTGTGCACA AATAGGTTCT CTTGAATTAG CAAGATGGAT GGATGAGTAT 
    ATCAGCATGA GTGAGTTTAG AAATGATGTG ATTGTCAATA CTTCCCTCAT TGACACGTAT 
    GCAAAATGTG GAAGTGTAGA TATGGCTCGC TTTGTTTTTG ACAGAATACC AGATAAAGAT 
    GTTGTTGTGT GGAGTGCGAT GATGGTGGGA TATGGATTAC ATGGGCAAGG TCGGGAATCT 
    ATCATTCTTT TTCATGCAAT GAGGCAAGCT GGGGTGTCCC CAAATGATGT CACCTTTGTT 
    GGGCTCCTCA CAGCATGCAA AAATTCAGGT CTTGTAGAAG AAGGTTGGGA CCTCTTCCAC 
    CGCATGAGAG ATTATGGGAT TGAACCAAGG CACCAACATT ATGCATGTGT GGTGGATCTT 
    CTTGGGCGTG CAGGCCATTT AGATCGAGCT TATAATTTTG TCATGAACAT GCCAATTGAA 
    CCAGGTGTAA GTGTGTGGGG AGCCCTTTTG AGTGCATGCA AGATCCATCG CCATGTGACA 
    CTAGGGGAGT ATGCAGCTGA ACGACTTTTC TCATTAGATC CATACAACAC GGGGCATTAT 
    GTTCAGCTGT CAAACCTCTA TGCTTCTTCT CGCTTATGGG ATTGTGTTGC AAAGGTACGG 
    GTGTTAATGA GGGAGAAAGG ACTTACTAAG CACCTTGGTT ATAGTGTGAT TGAGATCAAT 
    GGAAAGCTCC AGGCATTTCA GGCTGGAGAT AAGACGCATC CAAGATCCAA AGAGATTTTT 
    GAGGAAGTTG AGGATTTAGA GAGAAGATTA AAGGAAGCTG GATTTGTCCC CCATACAGAA 
    TCTGTCCTGC ATGATTTGAA TTATGAGGAA ACAGAGGAGA CACTTTGTAA TCATAGTGAG 
    AGACTAGCGA TTGCTTATGG CCTCATCAGT ACTCCCCCTG GAACAACCCT TAGGATAACA 
    AAGAATCTTC GGGCATGCGA CAACTGTCAT GCTGCAATCA AGCTCATCTC AAAGCTGGTA 
    AGTAGGGAGA TAGTTGTCAG GGATGCATGT CGTTTCCATC ATTTTAAGGA TGGAGCTTGT 
    TCCTGTGGAG ATTATTGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024439003.1
    CDS88..2328
    Translation

    Target ORF information:

    RefSeq Version XM_024583235.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pentatricopeptide repeat-containing protein At3g12770 (LOC7464709), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024583235.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCAAAGT CTCTGCCATT TCTTACAAGG CCTCCAAACA AAGTCTCCTC TTTTATTGCT 
    CTCTGTCCCC AACCCTTTAA AATTCGACCG TTGGATCCTC CTCCATTTAG ATTTCCCGCC 
    TCCACTCTCA AATTCCTCGA AACCCATTAT TCTTCATCTC TCAATTTAAC AACCCACTTC 
    AACAACAACA AGGATGACTG CAATGAAAGT ACCTTCAAAC CTGACAAATT CTACGCGTCA 
    TTAATCGATG ATTCGATACA CAAAACCCAC TTGAACCAAA TCTATGCTAA GTTATTAGTA 
    ACGGGGTTGC AATATGGTGG TTTCTTGATA GCAAAATTAG TTAACAAGGC TTCGAATATA 
    GGAGAAGTTA GCTGTGCACG TAAGTTGTTT GATAAATTTC CTGACCCAGA CGTGTTTTTG 
    TGGAATGCGA TTGTTAGGTG TTATTCTAGG CATGGTTTCT TTGGTCATGC TATTGAAATG 
    TATGCAAGAA TGCAAGTTGC GTGTGTTAGT CCTGATGGGT TCAGTTTTCC TTGTGTTCTC 
    AAAGCTTGCA GTGCCTTGCC GGCTCTTGAA ATGGGGAGGA GGGTACATGG GCAGATATTT 
    AGACATGGGT TTGAATCGGA TGTGTTTGTG CAGAACGGTC TTGTGGCATT GTATGCAAAA 
    TGTGGAGAGA TTGTGCGAGC TAATGCTGTT TTTGGTAGGC TAGTTGATAG GACTATTGTT 
    TCTTGGACCT CGATTATTTC TGGGTATGCG CAGAATGGAC AGCCTATTGA AGCCTTGCGG 
    ATTTTTAGTG AAATGAGGAA AACAAATGTG AGACCAGATT GGATAGCGCT TGTGAGCGTT 
    CTTAGAGCAT ATACAGATGT AGAGGATTTG GAACATGGGA AATCTATTCA TGGTTGCGTG 
    ATTAAAATGG GACTTGAATG TGAATTTGAT TTGCTCATTT CTCTTACCTC TTTGTATGCA 
    AAATGTGGGC ACGTTATGGT TGCTAGATTA TTTTTTAACC AGGTGGAGAA CCCAAGTTTG 
    ATATTTTGGA ATGCAATGAT TTCTGGTTAT GTGAAAAATG GGTATGCCGA GGAAGCTATT 
    GAACTGTTCC GTCTAATGAA AAGTAAAAAT ATAAGACCAG ATTCTATTAC TGTGACTTCT 
    AGCATTGCAG CTTGTGCACA AATAGGTTCT CTTGAATTAG CAAGATGGAT GGATGAGTAT 
    ATCAGCATGA GTGAGTTTAG AAATGATGTG ATTGTCAATA CTTCCCTCAT TGACACGTAT 
    GCAAAATGTG GAAGTGTAGA TATGGCTCGC TTTGTTTTTG ACAGAATACC AGATAAAGAT 
    GTTGTTGTGT GGAGTGCGAT GATGGTGGGA TATGGATTAC ATGGGCAAGG TCGGGAATCT 
    ATCATTCTTT TTCATGCAAT GAGGCAAGCT GGGGTGTCCC CAAATGATGT CACCTTTGTT 
    GGGCTCCTCA CAGCATGCAA AAATTCAGGT CTTGTAGAAG AAGGTTGGGA CCTCTTCCAC 
    CGCATGAGAG ATTATGGGAT TGAACCAAGG CACCAACATT ATGCATGTGT GGTGGATCTT 
    CTTGGGCGTG CAGGCCATTT AGATCGAGCT TATAATTTTG TCATGAACAT GCCAATTGAA 
    CCAGGTGTAA GTGTGTGGGG AGCCCTTTTG AGTGCATGCA AGATCCATCG CCATGTGACA 
    CTAGGGGAGT ATGCAGCTGA ACGACTTTTC TCATTAGATC CATACAACAC GGGGCATTAT 
    GTTCAGCTGT CAAACCTCTA TGCTTCTTCT CGCTTATGGG ATTGTGTTGC AAAGGTACGG 
    GTGTTAATGA GGGAGAAAGG ACTTACTAAG CACCTTGGTT ATAGTGTGAT TGAGATCAAT 
    GGAAAGCTCC AGGCATTTCA GGCTGGAGAT AAGACGCATC CAAGATCCAA AGAGATTTTT 
    GAGGAAGTTG AGGATTTAGA GAGAAGATTA AAGGAAGCTG GATTTGTCCC CCATACAGAA 
    TCTGTCCTGC ATGATTTGAA TTATGAGGAA ACAGAGGAGA CACTTTGTAA TCATAGTGAG 
    AGACTAGCGA TTGCTTATGG CCTCATCAGT ACTCCCCCTG GAACAACCCT TAGGATAACA 
    AAGAATCTTC GGGCATGCGA CAACTGTCAT GCTGCAATCA AGCTCATCTC AAAGCTGGTA 
    AGTAGGGAGA TAGTTGTCAG GGATGCATGT CGTTTCCATC ATTTTAAGGA TGGAGCTTGT 
    TCCTGTGGAG ATTATTGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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