Gene Symbol | Bivm |
Entrez Gene ID | 102548228 |
Full Name | basic, immunoglobulin-like variable motif containing |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Bivm cDNA ORF clone
Gene Symbol | Bivm |
Entrez Gene ID | 102548228 |
Full Name | basic, immunoglobulin-like variable motif containing |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006244879.1 | XP_006244941.1 | basic immunoglobulin-like variable motif-containing protein isoform X2 |
XM_017596228.1 | XP_017451717.1 | basic immunoglobulin-like variable motif-containing protein isoform X2 |
XM_006244875.3 | XP_006244937.1 | basic immunoglobulin-like variable motif-containing protein isoform X2 |
XM_008767063.2 | XP_008765285.1 | basic immunoglobulin-like variable motif-containing protein isoform X3 |
XM_006244876.1 | XP_006244938.1 | basic immunoglobulin-like variable motif-containing protein isoform X2 |
NM_001305447.1 | NP_001292376.1 | basic immunoglobulin-like variable motif-containing protein |
XM_006244881.3 | XP_006244943.2 | basic immunoglobulin-like variable motif-containing protein isoform X1 |
XM_006244874.3 | XP_006244936.1 | basic immunoglobulin-like variable motif-containing protein isoform X2 |
Bos taurus (cattle) | BIVM | NP_001193382.2 |
Rattus norvegicus (Norway rat) | LOC102548228 | XP_006244941.1 |
Homo sapiens (human) | BIVM | NP_060163.2 |
BIVM | XP_002800870.1 | |
Mus musculus (house mouse) | Bivm | NP_653141.3 |
Gallus gallus (chicken) | BIVM | NP_989582.1 |
Xenopus tropicalis (tropical clawed frog) | bivm | NP_001072918.1 |
Pan troglodytes (chimpanzee) | BIVM | XP_003952469.1 |
Canis lupus familiaris (dog) | BIVM | NP_001239277.1 |
Shotgun proteomics reveals specific modulated protein patterns in tears of patients with primary open angle glaucoma na?ve to therapy.
Pieragostino D, Agnifili L, Fasanella V, D'Aguanno S, Mastropasqua R, Di Ilio C, Sacchetta P, Urbani A, Del Boccio P
Molecular bioSystems9(6)1108-16(2013 Jun)
Gene and alternative splicing annotation with AIR.
Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G
Genome research15(1)54-66(2005 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Bivm gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Bivm cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa18392 | |
Clone ID Related Accession (Same CDS sequence) | XM_006244879.1 , XM_017596228.1 , XM_006244875.3 , XM_006244876.1 , NM_001305447.1 , XM_006244874.3 | |
Accession Version | NM_001305447.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-02 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07067520.1. On or before Mar 13, 2015 this sequence version replaced XM_006244873.1, XM_006226813.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments and orthologous data. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001292376.1 |
CDS | 445..1953 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001305447.1 |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa18392 | |
Clone ID Related Accession (Same CDS sequence) | XM_006244879.1 , XM_017596228.1 , XM_006244875.3 , XM_006244876.1 , NM_001305447.1 , XM_006244874.3 | |
Accession Version | XM_006244879.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005108.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006244941.1 |
CDS | 589..2097 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006244879.1 |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa18392 | |
Clone ID Related Accession (Same CDS sequence) | XM_006244879.1 , XM_017596228.1 , XM_006244875.3 , XM_006244876.1 , NM_001305447.1 , XM_006244874.3 | |
Accession Version | XM_017596228.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005108.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017451717.1 |
CDS | 169..1677 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017596228.1 |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa18392 | |
Clone ID Related Accession (Same CDS sequence) | XM_006244879.1 , XM_017596228.1 , XM_006244875.3 , XM_006244876.1 , NM_001305447.1 , XM_006244874.3 | |
Accession Version | XM_006244875.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005108.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006244875.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006244937.1 |
CDS | 381..1889 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006244875.3 |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa18392 | |
Clone ID Related Accession (Same CDS sequence) | XM_006244879.1 , XM_017596228.1 , XM_006244875.3 , XM_006244876.1 , NM_001305447.1 , XM_006244874.3 | |
Accession Version | XM_006244876.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005108.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006244938.1 |
CDS | 401..1909 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006244876.1 |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa18392 | |
Clone ID Related Accession (Same CDS sequence) | XM_006244879.1 , XM_017596228.1 , XM_006244875.3 , XM_006244876.1 , NM_001305447.1 , XM_006244874.3 | |
Accession Version | XM_006244874.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005108.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006244874.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006244936.1 |
CDS | 261..1769 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006244874.3 |
1 | ATGCCTAACA TCACTGAAGC TGGAAAAGCC ACCGATTCTG GACGCGATGA GTACAGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa51481 | |
Clone ID Related Accession (Same CDS sequence) | XM_008767063.2 | |
Accession Version | XM_008767063.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1047bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005108.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008767063.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGTTTA CAGGCAATGC AAAGAAACAA ATTTCCAAGA AGAAAACATC AGATAAAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008765285.1 |
CDS | 71..1117 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008767063.2 |
1 | ATGGAGTTTA CAGGCAATGC AAAGAAACAA ATTTCCAAGA AGAAAACATC AGATAAAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa62638 | |
Clone ID Related Accession (Same CDS sequence) | XM_006244881.3 | |
Accession Version | XM_006244881.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1950bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | basic immunoglobulin-like variable motif-containing protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005108.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006244881.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGATCC AGTGTTGCCT TCCAGCACCA GAGTTCCGGG ACCCAACAGG AACAGAGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006244943.2 |
CDS | 123..2072 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006244881.3 |
1 | ATGCAGATCC AGTGTTGCCT TCCAGCACCA GAGTTCCGGG ACCCAACAGG AACAGAGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Shotgun proteomics reveals specific modulated protein patterns in tears of patients with primary open angle glaucoma na?ve to therapy. |
Gene and alternative splicing annotation with AIR. |