| Gene Symbol | ATXRCC1 |
| Entrez Gene ID | 844382 |
| Full Name | BRCT domain-containing DNA repair protein |
| Synonyms | T21F11.25,T21F11_25,XRCC1,homolog of X-ray repair cross complementing 1 |
| Gene Type | protein-coding |
| Organism | Arabidopsis thaliana(thale cress) |
IVD Raw Materials
ORF » Species Summary » Arabidopsis thaliana » ATXRCC1 cDNA ORF clone
| Gene Symbol | ATXRCC1 |
| Entrez Gene ID | 844382 |
| Full Name | BRCT domain-containing DNA repair protein |
| Synonyms | T21F11.25,T21F11_25,XRCC1,homolog of X-ray repair cross complementing 1 |
| Gene Type | protein-coding |
| Organism | Arabidopsis thaliana(thale cress) |
| mRNA | Protein | Name |
|---|---|---|
| NM_106691.4 | NP_178158.2 | BRCT domain-containing DNA repair protein |
| NM_001084387.2 | NP_001077856.1 | BRCT domain-containing DNA repair protein |
| NM_001334987.1 | NP_001321272.1 | BRCT domain-containing DNA repair protein |
| NM_180654.3 | NP_850985.1 | BRCT domain-containing DNA repair protein |
| NM_001198520.1 | NP_001185449.1 | BRCT domain-containing DNA repair protein |
| Arabidopsis thaliana (thale cress) | ATXRCC1 | NP_001185449.1 |
| Oryza sativa (rice) | Os06g0144000 | NP_001056780.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
XRCC1 is a component of plant base excision repair and functions at several stages during active DNA demethylation in Arabidopsis
Title: The DNA repair protein XRCC1 functions in the plant DNA demethylation pathway by stimulating cytosine methylation (5-meC) excision, gap tailoring, and DNA ligation.
established existence of a Ku-independent, Xrcc1-dependent double-strand breakage repair pathway
Title: Xrcc1-dependent and Ku-dependent DNA double-strand break repair kinetics in Arabidopsis plants.
The following ATXRCC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATXRCC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OAb28448 | |
| Clone ID Related Accession (Same CDS sequence) | NM_106691.4 , NM_001084387.2 , NM_001334987.1 , NM_180654.3 | |
| Accession Version | NM_106691.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | BRCT domain-containing DNA repair protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Apr 18, 2007 this sequence version replaced NM_106691.3. | |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_178158.2 |
| CDS | 174..1235 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_106691.4 |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAb28448 | |
| Clone ID Related Accession (Same CDS sequence) | NM_106691.4 , NM_001084387.2 , NM_001334987.1 , NM_180654.3 | |
| Accession Version | NM_001084387.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | BRCT domain-containing DNA repair protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_001084387.1. | |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001077856.1 |
| CDS | 123..1184 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001084387.2 |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAb28448 | |
| Clone ID Related Accession (Same CDS sequence) | NM_106691.4 , NM_001084387.2 , NM_001334987.1 , NM_180654.3 | |
| Accession Version | NM_001334987.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | BRCT domain-containing DNA repair protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). | |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001321272.1 |
| CDS | 594..1655 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001334987.1 |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAb28448 | |
| Clone ID Related Accession (Same CDS sequence) | NM_106691.4 , NM_001084387.2 , NM_001334987.1 , NM_180654.3 | |
| Accession Version | NM_180654.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | BRCT domain-containing DNA repair protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_180654.2. | |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_850985.1 |
| CDS | 225..1286 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_180654.3 |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAb29514 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001198520.1 | |
| Accession Version | NM_001198520.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | BRCT domain-containing DNA repair protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). | |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001185449.1 |
| CDS | 469..1494 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001198520.1 |
1 | ATGTCTCAGA AGCGAAATCT TCCTTCTTGG ATGAGTTCTA GGGATCCCGA GATTACTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |