Gene Symbol | PTPN6 |
Entrez Gene ID | 512312 |
Full Name | protein tyrosine phosphatase, non-receptor type 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » PTPN6 cDNA ORF clone
gRNAs
Gene Symbol | PTPN6 |
Entrez Gene ID | 512312 |
Full Name | protein tyrosine phosphatase, non-receptor type 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005207130.3 | XP_005207187.1 | tyrosine-protein phosphatase non-receptor type 6 isoform X1 |
XM_024991632.1 | XP_024847400.1 | tyrosine-protein phosphatase non-receptor type 6 isoform X3 |
NM_001098017.1 | NP_001091486.1 | tyrosine-protein phosphatase non-receptor type 6 |
XM_005207130.2 | XP_005207187.1 | tyrosine-protein phosphatase non-receptor type 6 isoform X1 |
XM_005207131.2 | XP_005207188.1 | tyrosine-protein phosphatase non-receptor type 6 isoform X2 |
XM_005207131.3 | XP_005207188.1 | tyrosine-protein phosphatase non-receptor type 6 isoform X2 |
Bos taurus (cattle) | PTPN6 | NP_001091486.1 |
Danio rerio (zebrafish) | ptpn6 | NP_956254.1 |
Gallus gallus (chicken) | PTPN6 | NP_001026655.1 |
Homo sapiens (human) | PTPN6 | NP_536858.1 |
Pan troglodytes (chimpanzee) | PTPN6 | XP_001163468.2 |
Canis lupus familiaris (dog) | PTPN6 | XP_005637268.1 |
Rattus norvegicus (Norway rat) | Ptpn6 | NP_446360.1 |
Xenopus tropicalis (tropical clawed frog) | ptpn6 | NP_001116928.1 |
PTPN6 | XP_001110915.1 | |
Mus musculus (house mouse) | Ptpn6 | NP_038573.2 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)
Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index.
Sonstegard TS, Capuco AV, White J, Van Tassell CP, Connor EE, Cho J, Sultana R, Shade L, Wray JE, Wells KD, Quackenbush J
Mammalian genome : official journal of the International Mammalian Genome Society13(7)373-9(2002 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PTPN6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PTPN6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40487 | |
Clone ID Related Accession (Same CDS sequence) | NM_001098017.1 | |
Accession Version | NM_001098017.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-12 | |
Organism | Bos taurus(cattle) | |
Product | tyrosine-protein phosphatase non-receptor type 6 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT030499.1. On May 24, 2007 this sequence version replaced XM_874075.2. ##Evidence-Data-START## Transcript exon combination :: BT030499.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGTGAGGT GGTTTCACCG AGACCTCAGT GGGCTGGATG CGGAGACCCT GCTCAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001091486.1 |
CDS | 118..1899 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGAGGT GGTTTCACCG AGACCTCAGT GGGCTGGATG CGGAGACCCT GCTCAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa19788 | |
Clone ID Related Accession (Same CDS sequence) | XM_005207130.3 , XM_005207130.2 | |
Accession Version | XM_005207130.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | tyrosine-protein phosphatase non-receptor type 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005207130.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGTCCC ATGGGTGGTT TCACCGAGAC CTCAGTGGGC TGGATGCGGA GACCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005207187.1 |
CDS | 293..2086 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGTCCC ATGGGTGGTT TCACCGAGAC CTCAGTGGGC TGGATGCGGA GACCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa19788 | |
Clone ID Related Accession (Same CDS sequence) | XM_005207130.3 , XM_005207130.2 | |
Accession Version | XM_005207130.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | tyrosine-protein phosphatase non-receptor type 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103940.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005207130.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGTCCC ATGGGTGGTT TCACCGAGAC CTCAGTGGGC TGGATGCGGA GACCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005207187.1 |
CDS | 282..2075 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGTCCC ATGGGTGGTT TCACCGAGAC CTCAGTGGGC TGGATGCGGA GACCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa19789 | |
Clone ID Related Accession (Same CDS sequence) | XM_005207131.2 , XM_005207131.3 | |
Accession Version | XM_005207131.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1788bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | tyrosine-protein phosphatase non-receptor type 6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103940.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005207131.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAGGT GGTTTCACCG AGACCTCAGT GGGCTGGATG CGGAGACCCT GCTCAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005207188.1 |
CDS | 179..1966 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAGGT GGTTTCACCG AGACCTCAGT GGGCTGGATG CGGAGACCCT GCTCAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa19789 | |
Clone ID Related Accession (Same CDS sequence) | XM_005207131.2 , XM_005207131.3 | |
Accession Version | XM_005207131.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1788bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | tyrosine-protein phosphatase non-receptor type 6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005207131.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAGGT GGTTTCACCG AGACCTCAGT GGGCTGGATG CGGAGACCCT GCTCAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005207188.1 |
CDS | 171..1958 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAGGT GGTTTCACCG AGACCTCAGT GGGCTGGATG CGGAGACCCT GCTCAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa234317 | |
Clone ID Related Accession (Same CDS sequence) | XM_024991632.1 | |
Accession Version | XM_024991632.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1713bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | tyrosine-protein phosphatase non-receptor type 6 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGTCCC ATGGGTGGTT TCACCGAGAC CTCAGTGGGC TGGATGCGGA GACCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024847400.1 |
CDS | 282..1994 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGTCCC ATGGGTGGTT TCACCGAGAC CTCAGTGGGC TGGATGCGGA GACCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Characterization of 954 bovine full-CDS cDNA sequences. |
Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. |