VIPAS39 cDNA ORF clone, Calidris pugnax(ruff)

Gene
Clones
gRNAs

Summary

Gene Symbol	VIPAS39
Entrez Gene ID	106887858
Full Name	VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Gene Type	protein-coding
Organism	Calidris pugnax(ruff)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014941622.1	XP_014797108.1	spermatogenesis-defective protein 39 homolog

Pathways from BioSystems
Gene Ontology

The following VIPAS39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VIPAS39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa64768	XM_014941622.1 Latest version!	Calidris pugnax VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog (VIPAS39), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

VIPAS39 ( XM_014941622.1 ) cDNA ORF clone, Calidris pugnax(ruff) -> XP_014797108.1 Calidris pugnax VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog (VIPAS39), mRNA.

Price & Availability↑

CloneID	OCa64768
Clone ID Related Accession (Same CDS sequence)	XM_014941622.1
Accession Version	XM_014941622.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1257bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-12-08
Organism	Calidris pugnax(ruff)
Product	spermatogenesis-defective protein 39 homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090839.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGCCTCCCC CAGAAGAGCT AAAGGAATCC AAACGGGCAG TGAATAGCCT TCGGGATATC 
GTCGATGATG ATGATGACGA CCTTGAGAGG GTCAGCTGGA GCGGGGAACC TGTGGGAAGG 
CGAAACAAAC TTCCAAGTTT TCAGTCCCTT TCAGATGCCC TCTCTGACAC AGGAGTTAAA 
AACTACGCCC CAGAGCTGCG CAGACCGAAA GCTGAGTACA AGGATTACAG CAGTGATTGG 
AGCCCCAAAG ATACGGTCAG GCGAATGCAG AGGGGCAAGA TCTGCTCTCT AGAGAGATTT 
CGCTCGCTGC AGGATAAGCT GGTGCTCTTG GATGAGGCGG TGGCAGGGCA TGATGGGAAC 
GTCATTACAG CTGTCCTGAT ATTCCTGAAA CGGACGCTAA GGAGAGAGAT CTTGTTTCGG 
GAGCTGGAGG TGCGGCAGGT GGCCTTATGT CACCTCATCC ATTTCCTCAA AGAGACGGGT 
GAGCAGAAGT TGCTTCTGGA TCTGCTCAGG TTCCTAGACA GGACCGAGGA AGTTGCTCTG 
TCCCAGTACC GGGAACATTT GAACATCCAA GATGTAGAAA AAAGGAGGGA ATTTCTGAAA 
GGCTGCATTG GGCTGCCATT TTCAGCTGAG GATACATCCC ACATTCAAGA CCATTACACC 
CTGTTGGAGC GACAGATCAT CATTGAGGCC AATGATCGGC ACTTGGAGTC AGCTGGGCAG 
TCAGAGATAT TTCGGAAATA TCCTCGTAAG GCTTCAATTC TCAACATGCC ACTAGTGACC 
ACCCTCTTCT ATTCCTGTTT CTACCACTAC ACAGAGGCTG AGGGAACATT CAGCAGCCCG 
ACCAACCTGA AGAAAACGTT TAAGATTCCT GATAAGCAGT ATGTGCTGAC TGCCCTGGCT 
GCCCGTGCCA AGCTGCGAGC CTGGGATGAT GTGGATGCCC TCTTCACCAC CAAGAACTGG 
CTGGGGTACA CCAAGAAGAA AGCACCTATT GGCTTCCACC GAGTGGTGGA GATCTTGCAG 
AGGAACAATG CTCCTGTGCA GGTGCTGCAG GAGTATGTGC GCCTGGTGGA GGATGTGGAG 
ACACGGTTGA ACCTCGCCAC CAAATACAAG TGCCATGATG TTGTCATTGA GACGTACAGG 
GATCTAAAGG ATCGCATCCA GCTGACAGCA TATAAATGCA AGGTGGAGCG AGGCTCTGCA 
GATGAAGAGA AGATAAACAG CATTCTCAAC AACATGCAAA TCCGATGGAA GAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014797108.1
CDS	1..1257
Translation	MPPPEELKESKRAVNSLRDIVDDDDDDLERVSWSGEPVGRRNKLPSFQSLSDALSDTGVKNYAPELRRPKAEYKDYSSDWSPKDTVRRMQRGKICSLERFRSLQDKLVLLDEAVAGHDGNVITAVLIFLKRTLRREILFRELEVRQVALCHLIHFLKETGEQKLLLDLLRFLDRTEEVALSQYREHLNIQDVEKRREFLKGCIGLPFSAEDTSHIQDHYTLLERQIIIEANDRHLESAGQSEIFRKYPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPTNLKKTFKIPDKQYVLTALAARAKLRAWDDVDALFTTKNWLGYTKKKAPIGFHRVVEILQRNNAPVQVLQEYVRLVEDVETRLNLATKYKCHDVVIETYRDLKDRIQLTAYKCKVERGSADEEKINSILNNMQIRWKN

Target ORF information:

RefSeq Version	XM_014941622.1
Organism	Calidris pugnax(ruff)
Definition	Calidris pugnax VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog (VIPAS39), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014941622.1

ORF Insert Sequence:

ATGCCTCCCC CAGAAGAGCT AAAGGAATCC AAACGGGCAG TGAATAGCCT TCGGGATATC 
GTCGATGATG ATGATGACGA CCTTGAGAGG GTCAGCTGGA GCGGGGAACC TGTGGGAAGG 
CGAAACAAAC TTCCAAGTTT TCAGTCCCTT TCAGATGCCC TCTCTGACAC AGGAGTTAAA 
AACTACGCCC CAGAGCTGCG CAGACCGAAA GCTGAGTACA AGGATTACAG CAGTGATTGG 
AGCCCCAAAG ATACGGTCAG GCGAATGCAG AGGGGCAAGA TCTGCTCTCT AGAGAGATTT 
CGCTCGCTGC AGGATAAGCT GGTGCTCTTG GATGAGGCGG TGGCAGGGCA TGATGGGAAC 
GTCATTACAG CTGTCCTGAT ATTCCTGAAA CGGACGCTAA GGAGAGAGAT CTTGTTTCGG 
GAGCTGGAGG TGCGGCAGGT GGCCTTATGT CACCTCATCC ATTTCCTCAA AGAGACGGGT 
GAGCAGAAGT TGCTTCTGGA TCTGCTCAGG TTCCTAGACA GGACCGAGGA AGTTGCTCTG 
TCCCAGTACC GGGAACATTT GAACATCCAA GATGTAGAAA AAAGGAGGGA ATTTCTGAAA 
GGCTGCATTG GGCTGCCATT TTCAGCTGAG GATACATCCC ACATTCAAGA CCATTACACC 
CTGTTGGAGC GACAGATCAT CATTGAGGCC AATGATCGGC ACTTGGAGTC AGCTGGGCAG 
TCAGAGATAT TTCGGAAATA TCCTCGTAAG GCTTCAATTC TCAACATGCC ACTAGTGACC 
ACCCTCTTCT ATTCCTGTTT CTACCACTAC ACAGAGGCTG AGGGAACATT CAGCAGCCCG 
ACCAACCTGA AGAAAACGTT TAAGATTCCT GATAAGCAGT ATGTGCTGAC TGCCCTGGCT 
GCCCGTGCCA AGCTGCGAGC CTGGGATGAT GTGGATGCCC TCTTCACCAC CAAGAACTGG 
CTGGGGTACA CCAAGAAGAA AGCACCTATT GGCTTCCACC GAGTGGTGGA GATCTTGCAG 
AGGAACAATG CTCCTGTGCA GGTGCTGCAG GAGTATGTGC GCCTGGTGGA GGATGTGGAG 
ACACGGTTGA ACCTCGCCAC CAAATACAAG TGCCATGATG TTGTCATTGA GACGTACAGG 
GATCTAAAGG ATCGCATCCA GCTGACAGCA TATAAATGCA AGGTGGAGCG AGGCTCTGCA 
GATGAAGAGA AGATAAACAG CATTCTCAAC AACATGCAAA TCCGATGGAA GAACTGA