USP5 cDNA ORF clone, Calidris pugnax(ruff)

Gene
Clones
gRNAs

Summary

Gene Symbol	USP5
Entrez Gene ID	106896899
Full Name	ubiquitin specific peptidase 5
Gene Type	protein-coding
Organism	Calidris pugnax(ruff)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014957190.1	XP_014812676.1	ubiquitin carboxyl-terminal hydrolase 5

Pathways from BioSystems
Gene Ontology

The following USP5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the USP5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa76172	XM_014957190.1 Latest version!	Calidris pugnax ubiquitin specific peptidase 5 (isopeptidase T) (USP5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

USP5 ( XM_014957190.1 ) cDNA ORF clone, Calidris pugnax(ruff) -> XP_014812676.1 Calidris pugnax ubiquitin specific peptidase 5 (isopeptidase T) (USP5), mRNA.

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CloneID	OCa76172
Clone ID Related Accession (Same CDS sequence)	XM_014957190.1
Accession Version	XM_014957190.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2433bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-12-08
Organism	Calidris pugnax(ruff)
Product	ubiquitin carboxyl-terminal hydrolase 5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015091072.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACACGT TCCTGGGCTT TGGGAAGCAA TATGTGGAAA AGCACTATCA GAAAACAGGC 
CAGCGGGTCT ACCTGCACCT CAAAAGAACA CGGAAACCGA AGGAAGAGGA CACCAACGCC 
AGTGCTGGGG ACCCTCCAAG GAAGAAACCA ACTCGCTTGG CTATCGGTGT AGAAGGTGGA 
TTTGACATCA CAGAGGAAAA GTTTGAATAT GACGAAGATG TAAAAATAGT AATTTTCCCA 
GAGCATTTGG ATATTCCTCG TGATGGGCTG GAGGGACTAC CAGACATGGT CAAAGACAGG 
ATTGCCAGTG CAGTCGAGGC CATCCTGACA GCAGATTCAG CATCACGGAA GCAGGAGGTG 
CAGGCTTGGG ATGGGGAGGT TCGACGTGTT TCCAAACATG CTTTTTCCCT GCAACAACTT 
CAGAACGATG TCCGGATCCC ACCATGTGGC TGGAAGTGCA GCAAGTGTGA CATGAGGGAG 
AACCTGTGGC TGAACATGAC CGACGGAGCC ATCCTCTGCG GCCGGCGCTA TTTTGATGGC 
AGTGGTGGCA ACAACCACGC GGTCGAGCAT TACCGGGAAA CCGGCTACCC ACTGGCTGTG 
AAACTGGGAA CAATTACTCC TGACGGGGCC GATGTCTACT CCTATGATGA GGATGACATG 
GTGTTGGATC CCAACCTGGC AGAACACCTT GCTCACTTTG GGATTGACAT GCTCAAGATG 
CAGAAGACAG ACAAGACGAT GACAGAACTG GAAATAGACA TGAACCAGCG CATTGGGGAG 
TGGGAGCTCA TCCAGGAGTC TGGCGTGCAG CTCAAGCCCC TCTATGGGCC TGGGTACACC 
GGTATCCGTA ACCTGGGCAA CAGTTGCTAC CTCAATTCCG TGATGCAGGT GCTGTTCAGT 
ATCCCAGACT TCCAGAGAAA GTATGTGGAC AAGCTGGAGA AGATATTCCA AAGTGCACCT 
TCGGACCCCA CACAGGACTT CAGCACACAA GTAGCCAAAC TGGGCCACGG ACTGCTTTCT 
GGGGAGTATT CAAAGCCAGC TTCTGCAGAT GGGGAACAGC AGCCCGATCA AAAGGGTATG 
CAAAATGGCA TTGCTCCACG CATGTTTAAG GCCCTCATTG GAAAGGGGCA CCCAGAATTT 
TCCACCAACC GACAGCAAGA CGCCCAAGAA TTCTTTCTGC ACTTCATCAA CATGGTGGAG 
AGGAACTGCC GAAGCTCGGA GAACCCTAAT GAGGTTTTCC GCTTTCTGGT GGAGGAGAAG 
CTGAAGTGCC TGGCCACAGA AAAGGTGAAA TATACCCAGC GTGTGGACTA TATCATGCAG 
CTGCCCGTGC CCATGGATGC TGCACTCAAC AAAGATGAAC TACTGGAATA TGAGGAGAAG 
AAGCGGCAGG CAGAGGAGGA GAAGCAGCCA CTGCCTGAGC TGGTGCGAGC CAAGGTGCCT 
TTCAGCTCCT GCCTAGAGGC CTATGGAGCT CCAGAGCAGG TGGATGATTT CTGGAGCACA 
GCCTTGCAGG CCAAGTCTGT GGCTCTCAAA ACAACACGGT TCGCCTCTTT CCCGGATTAT 
CTGGTGATCC AGATCAAGAA ATTCACTTTT GGTCTGGACT GGGTGCCCAA AAAGCTTGAT 
GTCTCCATTG AAATGCCAGA GGAGCTGGAC ATCTCTGCAC TGCAAGGGAC GGGGCTGCAA 
GATGGAGAAG AAGAAATGCC AGACATCGCA CCCCCACTGG TGACACCAGA CGAGCCCAAA 
GGTAGCCTGG GGTTCTATGG CAACGAGGAC GACGACTCCT TCTGCTCCCC TCACTTCTCC 
TCTCCGACAT CCCCCATGCT GGATGAGTCG GTGATTATCC AGCTGGTGGA GATGGGCTTT 
CCCATGGACG CCTGCCGCAA AGCCGTGTAC TACACGGGGA ACAGCGGGGC TGAGGCTGCC 
ATGAACTGGG TCATGTCACA TATGGATGAT CCAGACTTTG CTAACCCGTT GGTTCTCCCT 
GGATCCAGTG GACCAGGGTC AACTATTGCC TGCCCAGACC CTCCTTCAGA AGACAGCGTG 
GCCACCATCG TCTCCATGGG CTTCTCCCGG GACCAGGCTA TGAAAGCTCT TAGAGCCACG 
AACAACAGTC TGGAGCGTGC CGTGGATTGG ATCTTTAGTC ACATCGATGA CCTTGACGCA 
GAAGCTGCTA TGGATATCTC AGAGGGGCGC TCGGCAGCCG AGTCCATCTC CGAATCTGTC 
CCTGTGGGTC CTAAAGTGCG CGATGGGCCT GGAAAATATC AGCTGTTTGC CTTCATCAGC 
CACATGGGCA CTTCGACTAT GTGTGGGCAC TACGTTTGTC ACATCAAGAA AGATGGCAGG 
TGGGTGATCT ACAACGACCA GAAAGTCTGT GCTTCTGAGA AGCCCCCCAA GGATCTGGGC 
TACATCTACT TCTACCAGCG GATTCCCAGC TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014812676.1
CDS	46..2478
Translation	MNTFLGFGKQYVEKHYQKTGQRVYLHLKRTRKPKEEDTNASAGDPPRKKPTRLAIGVEGGFDITEEKFEYDEDVKIVIFPEHLDIPRDGLEGLPDMVKDRIASAVEAILTADSASRKQEVQAWDGEVRRVSKHAFSLQQLQNDVRIPPCGWKCSKCDMRENLWLNMTDGAILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMNQRIGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVMQVLFSIPDFQRKYVDKLEKIFQSAPSDPTQDFSTQVAKLGHGLLSGEYSKPASADGEQQPDQKGMQNGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEKLKCLATEKVKYTQRVDYIMQLPVPMDAALNKDELLEYEEKKRQAEEEKQPLPELVRAKVPFSSCLEAYGAPEQVDDFWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISALQGTGLQDGEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFSSPTSPMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTIACPDPPSEDSVATIVSMGFSRDQAMKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAESISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKDGRWVIYNDQKVCASEKPPKDLGYIYFYQRIPS

Target ORF information:

RefSeq Version	XM_014957190.1
Organism	Calidris pugnax(ruff)
Definition	Calidris pugnax ubiquitin specific peptidase 5 (isopeptidase T) (USP5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014957190.1

ORF Insert Sequence:

ATGAACACGT TCCTGGGCTT TGGGAAGCAA TATGTGGAAA AGCACTATCA GAAAACAGGC 
CAGCGGGTCT ACCTGCACCT CAAAAGAACA CGGAAACCGA AGGAAGAGGA CACCAACGCC 
AGTGCTGGGG ACCCTCCAAG GAAGAAACCA ACTCGCTTGG CTATCGGTGT AGAAGGTGGA 
TTTGACATCA CAGAGGAAAA GTTTGAATAT GACGAAGATG TAAAAATAGT AATTTTCCCA 
GAGCATTTGG ATATTCCTCG TGATGGGCTG GAGGGACTAC CAGACATGGT CAAAGACAGG 
ATTGCCAGTG CAGTCGAGGC CATCCTGACA GCAGATTCAG CATCACGGAA GCAGGAGGTG 
CAGGCTTGGG ATGGGGAGGT TCGACGTGTT TCCAAACATG CTTTTTCCCT GCAACAACTT 
CAGAACGATG TCCGGATCCC ACCATGTGGC TGGAAGTGCA GCAAGTGTGA CATGAGGGAG 
AACCTGTGGC TGAACATGAC CGACGGAGCC ATCCTCTGCG GCCGGCGCTA TTTTGATGGC 
AGTGGTGGCA ACAACCACGC GGTCGAGCAT TACCGGGAAA CCGGCTACCC ACTGGCTGTG 
AAACTGGGAA CAATTACTCC TGACGGGGCC GATGTCTACT CCTATGATGA GGATGACATG 
GTGTTGGATC CCAACCTGGC AGAACACCTT GCTCACTTTG GGATTGACAT GCTCAAGATG 
CAGAAGACAG ACAAGACGAT GACAGAACTG GAAATAGACA TGAACCAGCG CATTGGGGAG 
TGGGAGCTCA TCCAGGAGTC TGGCGTGCAG CTCAAGCCCC TCTATGGGCC TGGGTACACC 
GGTATCCGTA ACCTGGGCAA CAGTTGCTAC CTCAATTCCG TGATGCAGGT GCTGTTCAGT 
ATCCCAGACT TCCAGAGAAA GTATGTGGAC AAGCTGGAGA AGATATTCCA AAGTGCACCT 
TCGGACCCCA CACAGGACTT CAGCACACAA GTAGCCAAAC TGGGCCACGG ACTGCTTTCT 
GGGGAGTATT CAAAGCCAGC TTCTGCAGAT GGGGAACAGC AGCCCGATCA AAAGGGTATG 
CAAAATGGCA TTGCTCCACG CATGTTTAAG GCCCTCATTG GAAAGGGGCA CCCAGAATTT 
TCCACCAACC GACAGCAAGA CGCCCAAGAA TTCTTTCTGC ACTTCATCAA CATGGTGGAG 
AGGAACTGCC GAAGCTCGGA GAACCCTAAT GAGGTTTTCC GCTTTCTGGT GGAGGAGAAG 
CTGAAGTGCC TGGCCACAGA AAAGGTGAAA TATACCCAGC GTGTGGACTA TATCATGCAG 
CTGCCCGTGC CCATGGATGC TGCACTCAAC AAAGATGAAC TACTGGAATA TGAGGAGAAG 
AAGCGGCAGG CAGAGGAGGA GAAGCAGCCA CTGCCTGAGC TGGTGCGAGC CAAGGTGCCT 
TTCAGCTCCT GCCTAGAGGC CTATGGAGCT CCAGAGCAGG TGGATGATTT CTGGAGCACA 
GCCTTGCAGG CCAAGTCTGT GGCTCTCAAA ACAACACGGT TCGCCTCTTT CCCGGATTAT 
CTGGTGATCC AGATCAAGAA ATTCACTTTT GGTCTGGACT GGGTGCCCAA AAAGCTTGAT 
GTCTCCATTG AAATGCCAGA GGAGCTGGAC ATCTCTGCAC TGCAAGGGAC GGGGCTGCAA 
GATGGAGAAG AAGAAATGCC AGACATCGCA CCCCCACTGG TGACACCAGA CGAGCCCAAA 
GGTAGCCTGG GGTTCTATGG CAACGAGGAC GACGACTCCT TCTGCTCCCC TCACTTCTCC 
TCTCCGACAT CCCCCATGCT GGATGAGTCG GTGATTATCC AGCTGGTGGA GATGGGCTTT 
CCCATGGACG CCTGCCGCAA AGCCGTGTAC TACACGGGGA ACAGCGGGGC TGAGGCTGCC 
ATGAACTGGG TCATGTCACA TATGGATGAT CCAGACTTTG CTAACCCGTT GGTTCTCCCT 
GGATCCAGTG GACCAGGGTC AACTATTGCC TGCCCAGACC CTCCTTCAGA AGACAGCGTG 
GCCACCATCG TCTCCATGGG CTTCTCCCGG GACCAGGCTA TGAAAGCTCT TAGAGCCACG 
AACAACAGTC TGGAGCGTGC CGTGGATTGG ATCTTTAGTC ACATCGATGA CCTTGACGCA 
GAAGCTGCTA TGGATATCTC AGAGGGGCGC TCGGCAGCCG AGTCCATCTC CGAATCTGTC 
CCTGTGGGTC CTAAAGTGCG CGATGGGCCT GGAAAATATC AGCTGTTTGC CTTCATCAGC 
CACATGGGCA CTTCGACTAT GTGTGGGCAC TACGTTTGTC ACATCAAGAA AGATGGCAGG 
TGGGTGATCT ACAACGACCA GAAAGTCTGT GCTTCTGAGA AGCCCCCCAA GGATCTGGGC 
TACATCTACT TCTACCAGCG GATTCCCAGC TAG