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ccz1 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol ccz1
Entrez Gene ID 393103
Full Name CCZ1 homolog, vacuolar protein trafficking and biogenesis associated
Synonyms zgc:55344
General protein information
Preferred Names

CCZ1 homolog, vacuolar protein trafficking and biogenesis associated

Names

vacuolar fusion protein CCZ1 homolog
CCZ1 vacuolar protein trafficking and biogenesis associated homolog
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_017358438.2 XP_017213927.1 vacuolar fusion protein CCZ1 homolog isoform X1
NM_200134.1 NP_956428.1 vacuolar fusion protein CCZ1 homolog

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) CCZ1B XP_519566.2
Caenorhabditis elegans (roundworm) ccz-1 NP_506387.1
LOC721820 XP_001118015.1
Canis lupus familiaris (dog) CCZ1 XP_536878.3
Bos taurus (cattle) CCZ1 NP_001068960.1
Danio rerio (zebrafish) ccz1 NP_956428.1
Arabidopsis thaliana (thale cress) AT1G80910 NP_178206.1
Pan troglodytes (chimpanzee) LOC463258 XP_518965.3
Mus musculus (house mouse) Ccz1 NP_808350.1
Gallus gallus (chicken) CCZ1 NP_001006158.1
Drosophila melanogaster (fruit fly) CG14980 NP_647835.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP006687 XP_557365.2
Oryza sativa (rice) Os08g0427300 NP_001061842.1
Xenopus tropicalis (tropical clawed frog) ccz1b NP_001008198.1
Homo sapiens (human) CCZ1 NP_056437.4
Homo sapiens (human) CCZ1B NP_932765.1
Rattus norvegicus (Norway rat) Ccz1 NP_001014148.1
Arabidopsis thaliana (thale cress) AT1G16020 NP_849674.1

Gene Ontology


Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ccz1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ccz1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa03894 NM_200134.1
Latest version!		 Danio rerio CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (ccz1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa54444 XM_017358438.2
Latest version!		 Danio rerio CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (ccz1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa03894
Clone ID Related Accession (Same CDS sequence) NM_200134.1
Accession Version NM_200134.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1443bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-15
Organism Danio rerio(zebrafish)
Product vacuolar fusion protein CCZ1 homolog
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044374.1. On Jul 6, 2005 this sequence version replaced XM_682655.1. ##Evidence-Data-START## Transcript exon combination :: BC044374.1, BC152682.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCTGATGA TCAGCCCAAG AATGGCATCT GGAATGCAAG AGAAACAGTA CACACCGTCT 
TTGCTCAGTT TTTTCATCTA TAACCCTAAG TTTGGCCCAC GGGAAGGAGA GGAGGAAAAG 
AAAATTTTGT TTTACCACCC CATTGAAATA GAGAAGAACG AGAAGATTCG CAATGTTGGA 
CTCTGTGAGG CCATTGTTCA GTTCACCAGA ACATTCTGTC CTACAAAACC AGCCAAATCC 
CTTCATACTC AGAAGAACAG ACAGTTTTTC CATGAGCCAG AGGAAAATTA CTGGATGGTC 
ATGGTTGTTC GGAATCCAAT GGTTGAAAAA CCCAACAAAG ATGGCAAACC ACCCACTGTA 
GAATATCAAG AGGAAGAGAT TATTGATTCA GTTTATGGGT CTGTACTACA GCAGTGCTAC 
AGCATGTATA AGCTCTTCAA CGGGACGTTC AGCAGGGCGT TTGAGGCTGG TGGAGTGGAA 
CTGCTTACCC AAAAGCTCGA AAAGTTCTTT TACAGGTATC TGCAGACGCT TCATCTCCAG 
TCATGTGACC TGCTGGATGT GTTCGGAGGA ATCAGTTTTT TCCCTCTGGA CAAGATGACC 
TATCTGAAGA TCCAGTCCTT TGTCAATAGA GTAGAAGAAA GCTTGAGTTT GGTCAAATAC 
ACAGCCTTCC TATACAACGA CCAGCTGATC TGGAGTGGTC TAGAGCAGGA TGACATGCGT 
ATTCTGTACA AATACCTGAC AACCTCACTG TTCCCGCGGC ACACTGAACC TGAGCTTGCA 
GGAAGAGACT CTCCCCTCAG GCCAGAGGTG GCTGGGAATC TGTTGCACTA TGGGAGATTT 
TTAACAGGAC CAGCAAATCT TAAAGATCCA GAGGCAAAAT TCAGATTTCC CAGGATATTT 
GTAAACACAG AGGACAGTTG CGAGGAGCTA CATTTGATTG TTTACAAGGC AATGAGTGCA 
GCTGTATGCT TCATGATAAA TGCCTCGGTG GATTTGAATC GGGAGTTTTG TGAGAAATTA 
GACAGCTTGG TTGGACCCCA ACTCACCCTG CTGGCCTCTG ACATATGTGA ACAGTACAAC 
ATCAACCGCA GGATATCAGG GCCAGAGAAG GAGCCTCAGT TTAAATTCAT CTACTTTAAC 
CACATGAACT TGGCTGAGAA AAGCACCATC CACATGCGCA AGATGGCCAG TGTTTCCCTC 
ACCTCTGTCC ATCCAGACCT CATGAAAATC CTCGGAGACA TCAACTGCGA TTTTGCACGG 
GTTGATGAGG ATGAGGAAAT CATTGTCAAA GCGATGACCG ATTACTGGGT TGTTGGAAAG 
AAGTCTGATC AGAGGGAGCT CTACGTCATT TTGAACCAGA AGAATGCCAA CCTCATCGAA 
GTGAATGAGG AAGTGAAAAG GCTTTGTGCG ACGCAATTCA ATAATATTTT TTTCTTGGAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_956428.1
CDS133..1575
Translation

Target ORF information:

RefSeq Version NM_200134.1
Organism Danio rerio(zebrafish)
Definition Danio rerio CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (ccz1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_200134.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCTGATGA TCAGCCCAAG AATGGCATCT GGAATGCAAG AGAAACAGTA CACACCGTCT 
TTGCTCAGTT TTTTCATCTA TAACCCTAAG TTTGGCCCAC GGGAAGGAGA GGAGGAAAAG 
AAAATTTTGT TTTACCACCC CATTGAAATA GAGAAGAACG AGAAGATTCG CAATGTTGGA 
CTCTGTGAGG CCATTGTTCA GTTCACCAGA ACATTCTGTC CTACAAAACC AGCCAAATCC 
CTTCATACTC AGAAGAACAG ACAGTTTTTC CATGAGCCAG AGGAAAATTA CTGGATGGTC 
ATGGTTGTTC GGAATCCAAT GGTTGAAAAA CCCAACAAAG ATGGCAAACC ACCCACTGTA 
GAATATCAAG AGGAAGAGAT TATTGATTCA GTTTATGGGT CTGTACTACA GCAGTGCTAC 
AGCATGTATA AGCTCTTCAA CGGGACGTTC AGCAGGGCGT TTGAGGCTGG TGGAGTGGAA 
CTGCTTACCC AAAAGCTCGA AAAGTTCTTT TACAGGTATC TGCAGACGCT TCATCTCCAG 
TCATGTGACC TGCTGGATGT GTTCGGAGGA ATCAGTTTTT TCCCTCTGGA CAAGATGACC 
TATCTGAAGA TCCAGTCCTT TGTCAATAGA GTAGAAGAAA GCTTGAGTTT GGTCAAATAC 
ACAGCCTTCC TATACAACGA CCAGCTGATC TGGAGTGGTC TAGAGCAGGA TGACATGCGT 
ATTCTGTACA AATACCTGAC AACCTCACTG TTCCCGCGGC ACACTGAACC TGAGCTTGCA 
GGAAGAGACT CTCCCCTCAG GCCAGAGGTG GCTGGGAATC TGTTGCACTA TGGGAGATTT 
TTAACAGGAC CAGCAAATCT TAAAGATCCA GAGGCAAAAT TCAGATTTCC CAGGATATTT 
GTAAACACAG AGGACAGTTG CGAGGAGCTA CATTTGATTG TTTACAAGGC AATGAGTGCA 
GCTGTATGCT TCATGATAAA TGCCTCGGTG GATTTGAATC GGGAGTTTTG TGAGAAATTA 
GACAGCTTGG TTGGACCCCA ACTCACCCTG CTGGCCTCTG ACATATGTGA ACAGTACAAC 
ATCAACCGCA GGATATCAGG GCCAGAGAAG GAGCCTCAGT TTAAATTCAT CTACTTTAAC 
CACATGAACT TGGCTGAGAA AAGCACCATC CACATGCGCA AGATGGCCAG TGTTTCCCTC 
ACCTCTGTCC ATCCAGACCT CATGAAAATC CTCGGAGACA TCAACTGCGA TTTTGCACGG 
GTTGATGAGG ATGAGGAAAT CATTGTCAAA GCGATGACCG ATTACTGGGT TGTTGGAAAG 
AAGTCTGATC AGAGGGAGCT CTACGTCATT TTGAACCAGA AGAATGCCAA CCTCATCGAA 
GTGAATGAGG AAGTGAAAAG GCTTTGTGCG ACGCAATTCA ATAATATTTT TTTCTTGGAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa54444
Clone ID Related Accession (Same CDS sequence) XM_017358438.2
Accession Version XM_017358438.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1443bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product vacuolar fusion protein CCZ1 homolog isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017358438.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCTGATGA TCAGCCCAAG AATGGCATCT GGAATGCAAG AGAAACAGTA CACACCGTCT 
TTGCTCAGTT TTTTCATCTA TAACCCTAAG TTTGGCCCAC GGGAAGGAGA GGAGGAAAAG 
AAAATTTTGT TTTACCACCC CATTGAAATA GAGAAGAACG AGAAGATTCG CAATGTTGGA 
CTCTGTGAGG CCATTGTTCA GTTCACCAGA ACATTCTGTC CTACAAAACC AGCCAAATCC 
CTTCATACTC AGAAGAACAG ACAGTTTTTC CATGAGCCAG AGGAAAATTA CTGGATGGTC 
ATGGTTGTTC GGAATCCAAT GGTTGAAAAA CCCAACAAAG ATGGCAAACC ACCCACTGTA 
GAATATCAAG AGGAAGAGAT TATTGATTCA GTTTATGGGT CTGTACTACA GCAGTGCTAC 
AGCATGTATA AGCTCTTCAA CGGGACGTTC AGCAGGGCGT TTGAGGCTGG TGGAGTGGAA 
CTGCTTACCC AAAAGCTCGA AAAGTTCTTT TACAGGTATC TGCAGACGCT TCATCTCCAG 
TCATGTGACC TGCTGGATGT GTTCGGAGGA ATCAGTTTTT TCCCTCTGGA CAAGATGACC 
TATCTGAAGA TCCAGTCCTT TGTCAATAGA GTAGAAGAAA GCTTGAGTTT GGTCAAATAC 
ACAGCCTTCC TATACAACGA CCAGCTGATC TGGAGTGGTC TAGAGCAGGA TGACATGCGT 
ATTCTGTACA AATACCTGAC AACCTCACTG TTCCCGCGGC ACACTGAACC TGAGCTTGCA 
GGAAGAGACT CTCCCCTCAG GCCAGAGGTG GCTGGGAATC TGTTGCACTA TGGGAGATTT 
TTAACAGGAC CAGCAAATCT TAAAGATCCA GAGGCAAAAT TCAGATTTCC CAGGATATTT 
GTAAACACAG AGGACAGTTA CGAGGAGCTA CATTTGATTG TTTACAAGGC AATGAGTGCA 
GCTGTATGCT TCATGATAAA TGCCTCGGTG GATTTGAATC GGGAGTTTTG TGAGAAATTA 
GACAGCTTGG TTGGACCCCA ACTCACCCTG CTGGCCTCTG ACATATGTGA ACAGTACAAC 
ATCAACCGCA GGATATCAGG GCCAGAGAAG GAGCCTCAGT TTAAATTCAT CTACTTCAAC 
CACATGAACT TGGCTGAGAA AAGCACCATC CACATGCGCA AGACGGCCAG TGTTTCCCTC 
ACCTCTGTCC ATCCGGACCT CATGAAAATT CTCGGAGACA TCAACTGCGA TTTTGCACGG 
GTTGATGAGG ATGAGGAAAT CATTGTCAAA GCGATGACCG ATTACTGGGT TGTTGGAAAG 
AAGTCTGATC AGAGGGAGCT CTACGTCATT TTGAACCAGA AGAATGCCAA CCTCATCGAA 
GTGAATGAGG AAGTGAAAAG GCTTTGTGCG ACGCAATTCA ATAATATTTT TTTCTTGGAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017213927.1
CDS84..1526
Translation

Target ORF information:

RefSeq Version XM_017358438.2
Organism Danio rerio(zebrafish)
Definition Danio rerio CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (ccz1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017358438.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCTGATGA TCAGCCCAAG AATGGCATCT GGAATGCAAG AGAAACAGTA CACACCGTCT 
TTGCTCAGTT TTTTCATCTA TAACCCTAAG TTTGGCCCAC GGGAAGGAGA GGAGGAAAAG 
AAAATTTTGT TTTACCACCC CATTGAAATA GAGAAGAACG AGAAGATTCG CAATGTTGGA 
CTCTGTGAGG CCATTGTTCA GTTCACCAGA ACATTCTGTC CTACAAAACC AGCCAAATCC 
CTTCATACTC AGAAGAACAG ACAGTTTTTC CATGAGCCAG AGGAAAATTA CTGGATGGTC 
ATGGTTGTTC GGAATCCAAT GGTTGAAAAA CCCAACAAAG ATGGCAAACC ACCCACTGTA 
GAATATCAAG AGGAAGAGAT TATTGATTCA GTTTATGGGT CTGTACTACA GCAGTGCTAC 
AGCATGTATA AGCTCTTCAA CGGGACGTTC AGCAGGGCGT TTGAGGCTGG TGGAGTGGAA 
CTGCTTACCC AAAAGCTCGA AAAGTTCTTT TACAGGTATC TGCAGACGCT TCATCTCCAG 
TCATGTGACC TGCTGGATGT GTTCGGAGGA ATCAGTTTTT TCCCTCTGGA CAAGATGACC 
TATCTGAAGA TCCAGTCCTT TGTCAATAGA GTAGAAGAAA GCTTGAGTTT GGTCAAATAC 
ACAGCCTTCC TATACAACGA CCAGCTGATC TGGAGTGGTC TAGAGCAGGA TGACATGCGT 
ATTCTGTACA AATACCTGAC AACCTCACTG TTCCCGCGGC ACACTGAACC TGAGCTTGCA 
GGAAGAGACT CTCCCCTCAG GCCAGAGGTG GCTGGGAATC TGTTGCACTA TGGGAGATTT 
TTAACAGGAC CAGCAAATCT TAAAGATCCA GAGGCAAAAT TCAGATTTCC CAGGATATTT 
GTAAACACAG AGGACAGTTA CGAGGAGCTA CATTTGATTG TTTACAAGGC AATGAGTGCA 
GCTGTATGCT TCATGATAAA TGCCTCGGTG GATTTGAATC GGGAGTTTTG TGAGAAATTA 
GACAGCTTGG TTGGACCCCA ACTCACCCTG CTGGCCTCTG ACATATGTGA ACAGTACAAC 
ATCAACCGCA GGATATCAGG GCCAGAGAAG GAGCCTCAGT TTAAATTCAT CTACTTCAAC 
CACATGAACT TGGCTGAGAA AAGCACCATC CACATGCGCA AGACGGCCAG TGTTTCCCTC 
ACCTCTGTCC ATCCGGACCT CATGAAAATT CTCGGAGACA TCAACTGCGA TTTTGCACGG 
GTTGATGAGG ATGAGGAAAT CATTGTCAAA GCGATGACCG ATTACTGGGT TGTTGGAAAG 
AAGTCTGATC AGAGGGAGCT CTACGTCATT TTGAACCAGA AGAATGCCAA CCTCATCGAA 
GTGAATGAGG AAGTGAAAAG GCTTTGTGCG ACGCAATTCA ATAATATTTT TTTCTTGGAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG