Gene Symbol | barhl1b |
Entrez Gene ID | 553186 |
Full Name | BarH-like homeobox 1b |
Synonyms | BarH2,barhl1,barhl1.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » barhl1b cDNA ORF clone
Gene Symbol | barhl1b |
Entrez Gene ID | 553186 |
Full Name | BarH-like homeobox 1b |
Synonyms | BarH2,barhl1,barhl1.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001018132.1 | NP_001018142.1 | barH-like 1 homeobox protein |
Mus musculus (house mouse) | Barhl1 | NP_062319.1 |
Rattus norvegicus (Norway rat) | Barhl1 | NP_476450.1 |
Homo sapiens (human) | BARHL1 | NP_064448.1 |
Xenopus tropicalis (tropical clawed frog) | barhl1 | XP_002936232.1 |
Canis lupus familiaris (dog) | BARHL1 | XP_548404.3 |
Danio rerio (zebrafish) | barhl1b | NP_001018142.1 |
Pan troglodytes (chimpanzee) | BARHL1 | XP_001168385.1 |
LOC722313 | XP_001118474.1 | |
Bos taurus (cattle) | BARHL1 | NP_001193177.1 |
Gallus gallus (chicken) | BARHL1 | XP_427153.3 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
mafba is a downstream transcriptional effector of Vegfc signaling essential for embryonic lymphangiogenesis in zebrafish.
Koltowska K, Paterson S, Bower NI, Baillie GJ, Lagendijk AK, Astin JW, Chen H, Francois M, Crosier PS, Taft RJ, Simons C, Smith KA, Hogan BM
Genes & development29(15)1618-30(2015 Aug)
Evolutionary relationships and diversification of barhl genes within retinal cell lineages.
Schuhmacher LN, Albadri S, Ramialison M, Poggi L
BMC evolutionary biology11340(2011 Nov)
Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention.
Hufton AL, Mathia S, Braun H, Georgi U, Lehrach H, Vingron M, Poustka AJ, Panopoulou G
Genome research19(11)2036-51(2009 Nov)
Anatomy of zebrafish cerebellum and screen for mutations affecting its development.
Bae YK, Kani S, Shimizu T, Tanabe K, Nojima H, Kimura Y, Higashijima S, Hibi M
Developmental biology330(2)406-26(2009 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following barhl1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the barhl1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa02971 | |
Clone ID Related Accession (Same CDS sequence) | NM_001018132.1 | |
Accession Version | NM_001018132.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 972bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-08-05 | |
Organism | Danio rerio(zebrafish) | |
Product | barH-like 1 homeobox protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY596176.1. On Sep 21, 2011 this sequence version replaced XM_677740.5. ##Evidence-Data-START## Transcript exon combination :: AY596176.1, BC162083.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAAGCGT CCACCAACGG CTCCAGTTTT GGAATCGACT CCCTGCTGTC CCACAGGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001018142.1 |
CDS | 97..1068 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001018132.1 |
1 | ATGGAAGCGT CCACCAACGG CTCCAGTTTT GGAATCGACT CCCTGCTGTC CCACAGGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
mafba is a downstream transcriptional effector of Vegfc signaling essential for embryonic lymphangiogenesis in zebrafish. |
Evolutionary relationships and diversification of barhl genes within retinal cell lineages. |
Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention. |
Anatomy of zebrafish cerebellum and screen for mutations affecting its development. |