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HMHA1B cDNA ORF clone, Danio rerio(Zebrafish)

Summary

Gene Symbol HMHA1B
Entrez Gene ID 555849
Full Name histocompatibility (minor) HA-1 b
Synonyms hmha1
General protein information
Preferred Names

histocompatibility (minor) HA-1 b

Names

minor histocompatibility protein HA-1
rho GTPase-activating protein 45
Gene Type protein-coding
Organism Danio rerio(Zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_005170514.3 XP_005170571.1 minor histocompatibility protein HA-1 isoform X2
XM_678493.7 XP_683585.5 minor histocompatibility protein HA-1 isoform X5
XM_005170513.3 XP_005170570.1 minor histocompatibility protein HA-1 isoform X1
XM_005170513.4 XP_005170570.1 rho GTPase-activating protein 45 isoform X1
XM_005170514.4 XP_005170571.1 rho GTPase-activating protein 45 isoform X2
XM_678493.8 XP_683585.5 rho GTPase-activating protein 45 isoform X5
XM_005170515.4 XP_005170572.1 rho GTPase-activating protein 45 isoform X3
XM_005170516.4 XP_005170573.1 rho GTPase-activating protein 45 isoform X4
XM_005170515.3 XP_005170572.1 minor histocompatibility protein HA-1 isoform X3
XM_005170516.3 XP_005170573.1 minor histocompatibility protein HA-1 isoform X4

Pathways from BioSystems


Homologies


Homo sapiens (human) HMHA1 NP_036424.2
Gallus gallus (chicken) HMHA1 NP_001026108.1
HMHA1 XP_001117237.2
Mus musculus (house mouse) Hmha1 NP_001136173.1
Xenopus tropicalis (tropical clawed frog) hmha1 NP_001107971.1
Pan troglodytes (chimpanzee) HMHA1 XP_003953357.1
Canis lupus familiaris (dog) HMHA1 XP_005633213.1
Rattus norvegicus (Norway rat) Hmha1 NP_001101537.1
Danio rerio (zebrafish) LOC556955 XP_001919378.4
Danio rerio (zebrafish) hmha1b XP_683585.5
Bos taurus (cattle) HMHA1 NP_001192670.1

Gene Ontology

The following HMHA1B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HMHA1B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa26924 XM_005170513.4
Latest version!		 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26925 XM_005170514.4
Latest version!		 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26926 XM_005170515.4
Latest version!		 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26927 XM_005170516.4
Latest version!		 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26928 XM_678493.8
Latest version!		 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
View Old Accession Versions >>
ODa26924 XM_005170513.3 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26925 XM_005170514.3 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26928 XM_678493.7 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26926 XM_005170515.3 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
ODa26927 XM_005170516.3 Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $629.30
$899.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa26924
Clone ID Related Accession (Same CDS sequence) XM_005170513.3 , XM_005170513.4
Accession Version XM_005170513.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3411bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product minor histocompatibility protein HA-1 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170513.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGCAGAGA GTTGTACAGG AACCCCAGAC 
TCTCTGGAGC ACAGTCTGGA CTTGGATTCA GACCCAGAGG CAGAGCAGCC TGTTGATGAA 
ACGTCTATCC AAAGCAGGCC AGCGGTACTC CTGGTGACCC TGCAGAGCTC CAGCGCTGAC 
CCTCCTGCCC TCCCTGAGAG CGAACCACCA GAGCTGGAGG ACCAGAGCCA CTCACTAGCG 
GCCCTCAACA TCAACCAGAG TAACAACACC ACCAAAACAC TCACCTCTTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170570.1
CDS313..3723
Translation

Target ORF information:

RefSeq Version XM_005170513.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170513.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGCAGAGA GTTGTACAGG AACCCCAGAC 
TCTCTGGAGC ACAGTCTGGA CTTGGATTCA GACCCAGAGG CAGAGCAGCC TGTTGATGAA 
ACGTCTATCC AAAGCAGGCC AGCGGTACTC CTGGTGACCC TGCAGAGCTC CAGCGCTGAC 
CCTCCTGCCC TCCCTGAGAG CGAACCACCA GAGCTGGAGG ACCAGAGCCA CTCACTAGCG 
GCCCTCAACA TCAACCAGAG TAACAACACC ACCAAAACAC TCACCTCTTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26924
Clone ID Related Accession (Same CDS sequence) XM_005170513.3 , XM_005170513.4
Accession Version XM_005170513.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3411bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product rho GTPase-activating protein 45 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170513.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGCAGAGA GTTGTACAGG AACCCCAGAC 
TCTCTGGAGC ACAGTCTGGA CTTGGATTCA GACCCAGAGG CAGAGCAGCC TGTTGATGAA 
ACGTCTATCC AAAGCAGGCC AGCGGTACTC CTGGTGACCC TGCAGAGCTC CAGCGCTGAC 
CCTCCTGCCC TCCCTGAGAG CGAACCACCA GAGCTGGAGG ACCAGAGCCA CTCACTAGCG 
GCCCTCAACA TCAACCAGAG TAACAACACC ACCAAAACAC TCACCTCTTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170570.1
CDS311..3721
Translation

Target ORF information:

RefSeq Version XM_005170513.4
Organism Danio rerio(zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170513.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGCAGAGA GTTGTACAGG AACCCCAGAC 
TCTCTGGAGC ACAGTCTGGA CTTGGATTCA GACCCAGAGG CAGAGCAGCC TGTTGATGAA 
ACGTCTATCC AAAGCAGGCC AGCGGTACTC CTGGTGACCC TGCAGAGCTC CAGCGCTGAC 
CCTCCTGCCC TCCCTGAGAG CGAACCACCA GAGCTGGAGG ACCAGAGCCA CTCACTAGCG 
GCCCTCAACA TCAACCAGAG TAACAACACC ACCAAAACAC TCACCTCTTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26925
Clone ID Related Accession (Same CDS sequence) XM_005170514.3 , XM_005170514.4
Accession Version XM_005170514.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3408bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product minor histocompatibility protein HA-1 isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170514.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170571.1
CDS312..3719
Translation

Target ORF information:

RefSeq Version XM_005170514.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170514.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26925
Clone ID Related Accession (Same CDS sequence) XM_005170514.3 , XM_005170514.4
Accession Version XM_005170514.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3408bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product rho GTPase-activating protein 45 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170514.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170571.1
CDS311..3718
Translation

Target ORF information:

RefSeq Version XM_005170514.4
Organism Danio rerio(zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170514.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
CAGAGCAGCA TTGATGAAGA ACGCTGCTCT AATGATGAAC AAGGCCTCCC AGATGAACCT 
GCAGCTGTTG AATTAGACAA GCTGGAGGAC CACGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26926
Clone ID Related Accession (Same CDS sequence) XM_005170515.4 , XM_005170515.3
Accession Version XM_005170515.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3408bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product rho GTPase-activating protein 45 isoform X3
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170515.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GCAGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170572.1
CDS312..3719
Translation

Target ORF information:

RefSeq Version XM_005170515.4
Organism Danio rerio(zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170515.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GCAGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26926
Clone ID Related Accession (Same CDS sequence) XM_005170515.4 , XM_005170515.3
Accession Version XM_005170515.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3408bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product minor histocompatibility protein HA-1 isoform X3
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170515.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GCAGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170572.1
CDS314..3721
Translation

Target ORF information:

RefSeq Version XM_005170515.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170515.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GCAGAGAGTT GTACAGGAAC CCCAGACTCT 
CTGGAGCACA GTCTGGACTT GGATTCAGAC CCAGAGGCAG AGCAGCCTGT TGATGAAACG 
TCTATCCAAA GCAGGCCAGC GGTACTCCTG GTGACCCTGC AGAGCTCCAG CGCTGACCCT 
CCTGCCCTCC CTGAGAGCGA ACCACCAGAG CTGGAGGACC AGAGCCACTC ACTAGCGGCC 
CTCAACATCA ACCAGAGTAA CAACACCACC AAAACACTCA CCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26927
Clone ID Related Accession (Same CDS sequence) XM_005170516.4 , XM_005170516.3
Accession Version XM_005170516.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3405bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product rho GTPase-activating protein 45 isoform X4
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170516.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GAGAGTTGTA CAGGAACCCC AGACTCTCTG 
GAGCACAGTC TGGACTTGGA TTCAGACCCA GAGGCAGAGC AGCCTGTTGA TGAAACGTCT 
ATCCAAAGCA GGCCAGCGGT ACTCCTGGTG ACCCTGCAGA GCTCCAGCGC TGACCCTCCT 
GCCCTCCCTG AGAGCGAACC ACCAGAGCTG GAGGACCAGA GCCACTCACT AGCGGCCCTC 
AACATCAACC AGAGTAACAA CACCACCAAA ACACTCACCT CTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170573.1
CDS311..3715
Translation

Target ORF information:

RefSeq Version XM_005170516.4
Organism Danio rerio(zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170516.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GAGAGTTGTA CAGGAACCCC AGACTCTCTG 
GAGCACAGTC TGGACTTGGA TTCAGACCCA GAGGCAGAGC AGCCTGTTGA TGAAACGTCT 
ATCCAAAGCA GGCCAGCGGT ACTCCTGGTG ACCCTGCAGA GCTCCAGCGC TGACCCTCCT 
GCCCTCCCTG AGAGCGAACC ACCAGAGCTG GAGGACCAGA GCCACTCACT AGCGGCCCTC 
AACATCAACC AGAGTAACAA CACCACCAAA ACACTCACCT CTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26927
Clone ID Related Accession (Same CDS sequence) XM_005170516.4 , XM_005170516.3
Accession Version XM_005170516.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3405bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product minor histocompatibility protein HA-1 isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170516.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GAGAGTTGTA CAGGAACCCC AGACTCTCTG 
GAGCACAGTC TGGACTTGGA TTCAGACCCA GAGGCAGAGC AGCCTGTTGA TGAAACGTCT 
ATCCAAAGCA GGCCAGCGGT ACTCCTGGTG ACCCTGCAGA GCTCCAGCGC TGACCCTCCT 
GCCCTCCCTG AGAGCGAACC ACCAGAGCTG GAGGACCAGA GCCACTCACT AGCGGCCCTC 
AACATCAACC AGAGTAACAA CACCACCAAA ACACTCACCT CTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005170573.1
CDS313..3717
Translation

Target ORF information:

RefSeq Version XM_005170516.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005170516.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTGAAAC GTGTGTCGAG CAACAAAAGT TACAGTCCTT ACGCGACGAG TCAGAGAGTG 
AAAAAGTCAA GCAGCAAAAA GAAATTGGAC ATTTTACCAA ATAAACCCAA CGTCTGGCTC 
AAACAGCTGT CCGCTCTTCA AGAACAGCCT AGGAAAGATG CAGTGGACAG TGTCACCTCT 
TCATCCCAAA CGTCCTCCAG TCTGTCTCCC CCTATCGTAG AGGTCTCGTC GTCCTGTCCA 
GGTACGCCTT TGACCCAGCA CTCAAAGGCG CTGGGCTGCC CATCTCCGAT GGGCACCCTG 
AAGCGGCCCA CTTCTCTGAG TCGCAATCCC AGCGCTGCCG GCTTCCCCAT CCAATCTTGG 
GTGTTCAGTA AGGGTGCAGG AAAATCCGTC ATTGCCCAGA GCCCTTCACC AGAGACAGCT 
GACACCACAG TGGCCATCGA GGTGGAGGAC ATCCCGTCCC TGCTGCGCAG TGTGGAACGC 
TTTGCCAAAG CGGTGGAGAA ACTAAAGGAT GTCGTGCTTG AAGATAAGCA GGAGAACCGA 
CGTCCGCTGG CTCACGAGTG TCTGGGTGAA GTGCTGCGGG TCCTGCGGCA GGTCATCAGC 
ATGTACCCAC TGCTCAACAC CGTGGAGACG CTCACCGCTG CTGGAAAACT CATCTCACAG 
GTCAAAGGTT ATCACTATGA ATCGTGCATT GAACCAGAAA AGAAGGATTT TGAGAAGGCC 
ATTGAGACAA TCGCTGTGGC TTTCAGCAGC AATGTTTCGG AGCTGCTGAT GGGAGAGGTG 
GACAGTAGTA CACTGTTGTC AGTGGTGCCC ACTGAGAAAA GCAGGTCTAT GGAGAATCTC 
TCTGGTCATG GGTCTTCACA CACATGGGGT GATTCATCTG AGCTGGCGAT GAGCGCTGAA 
GAGGTGGACA TCATCCTGCA GCGCAGTGAA GGCGGTGTGG ACTCCGCTCT GACGTACGCT 
AAAACCATCT CCAAATACTT GAAGGATCTC ATCGGATACG TAGAGAGGAA GCTTGCGCTG 
GAGCTGGAGT TCTCCAAGGG TTTACAGAGG ATCTATCAGT CGTGTAAACA GACCATCACA 
CAGCCACACA TGCCCTTCTT CACCATCTAC TCTCAGGCAC TGGAGCAGGA TCTGGAGCAG 
AGCAATGGCA TGCATCAGGC TGCCGCAACT CTACAGAACC AGACCTTTAT CATGCCTCTG 
ATGGTCCGCA AACAAGAGCA TGAGAAGAAA CGCAAAGAGA TCAAGGAGCA GTGGCTGAAG 
GCCAAAAGAA AACTGATGGA GTGTGACGTG AACCTACGCA GGGCTAAACA GGTCTACATG 
ACCCGCTGTG AAGAATATGA TAAAGCCAGG ACAGCGGCGA ACAGGGCCGA GGAGGAGGGC 
GGCAGTGCCA CCACCAAAAC ACTGGACAAG AAGAAACGAC TGGAGGAAGA GGCCAGAAAC 
AAGGCTGAGG AAGCGGAGGC CACATACCGG ACCTGCATTG CAGACGCTAT CACTCAACAC 
CAGGAGCTAG AGCACATGAA AGTCACTGTC CTGCGGGGGA TTCAAGAGGT CATCAAGCAG 
ACCGACCAGA CCATTCGATC TGCCACCATC TCCTACTACC AGATCATGCA CATGCAGACG 
GTCGCGCTGC CGGTCCACTA CCAGACTCTG TGCGAGAGCA GTAAACAGTA CGACCCGGGA 
CAGCAGTACG GCACGCACGT CAAAGACCTT CAGATGAGCG AAGAACCTGA AACGCATTAT 
GAGTTTGAGG CCTACTCTGC CTCCTCTGTC CAGCAGTCGG TTAGGCCGCG CACCGACAGC 
GCTAATGCTG AAGCTCAGAG CAGTGCTGAG GTGCCACAAA CTGCAGGAGA GACTGGAGAC 
ACGAGCAGCT CACAGAAAGA TGATCAGAAG AGGGCTCGAG GTCACATGAC TCACAAATCC 
TGGGGCTCCA CAGTGAGTGA CACAGACAGT GTAGGAGGAG GAAGTGGCCT GGAATCCCCG 
ACTACCAGCA CAGGTGATAT TAGTAAAATG ACCAGGACGT CATCTACAGG AACCATGTCA 
TCAAATGAAG ATATAGATGA GAAAGACGCA AATGTTACTT CCTTTGAAAC GCCAAATATA 
AATGGCATTG AGCCTGAGAT TGTGGTGCCC ACTGGGCCCT TCAGGAACAT TGGCTTGTCA 
AAAGCCGCTC AGACGCACAA ACTGCGTAAA CTGCGCTCTC CATCCAAATG CAGAGAATGT 
GACAGCTACG TTTATTTCCA GGGAGCCGAG TGTGAGGAGT GTTTCCTGGC TTGTCACAAA 
CGCTGCTTGG AGACTATAGC CATTCAGTGC GGCCACAAGA AGCTCCAGGG CCGCCTTCAG 
CTGTTCGGGC AGGATTTCTT GCAGGTGTCC AGCAACAGTC CCGATGGGAT CCCCTTCATA 
ATCAAGAAGT GCATCGCTGA GATAGAGAGA CGAGCTTTAA GGATGAAGGG CATTTATCGA 
GTGAATGGAG TAAAGACGCG GGTGGAGAAA CTCTGCCAGG CATTTGAGAA CGGCAAAGAG 
CTGGTCGAAC TATCACAGTC ATCTCCACAT GACATCAGTA ATGTCCTGAA GCTTTACCTG 
CGACAGCTTC CGGAGCCCAT CATGCCCTTC CGCCTCTACA ACAGTCTCAT GGGTCTGGCC 
AAGGAAAGTC TGGCTGTTGT GGGTCCAGAG GGAGCTGACA GTGGTAAAGG ACCAGACCTG 
ATGGACCTTG GACCTGAGAC GGATCCTGAA CTCTTGGTCC TCGTGGACAG ACTTAAAAAT 
CTCCTGAAAG AGCTGCCCAA ACCAAACACC GCCACGCTCC GCTACCTAGC GCGTCATCTG 
AGGAGGATTG CAGAACTGGA AGACGACAAT AAGATGAGTC CCAGTAATCT GGGGATCGTG 
TTTGGCCCGT CACTGATGCG GCCCCGGCCC TCGGGAGCCA CAGTGTCTCT GTCCTCTCTG 
GTGGATTACC CATATCAGGC CCGCATAGTG GAGACCCTCA TCGTGTTTTA TCCCTCCATT 
TTTCAGTCAG AGTCCAGTCG GCCTGCAAGC AGCAGCACCC GCACACAGTC TCTACAGCAG 
AGCAGCATTG ATGAAGAACG CTGCTCTAAT GATGAACAAG GCCTCCCAGA TGAACCTGCA 
GCTGTTGAAT TAGACAAGCT GGAGGACCAC GAGAGTTGTA CAGGAACCCC AGACTCTCTG 
GAGCACAGTC TGGACTTGGA TTCAGACCCA GAGGCAGAGC AGCCTGTTGA TGAAACGTCT 
ATCCAAAGCA GGCCAGCGGT ACTCCTGGTG ACCCTGCAGA GCTCCAGCGC TGACCCTCCT 
GCCCTCCCTG AGAGCGAACC ACCAGAGCTG GAGGACCAGA GCCACTCACT AGCGGCCCTC 
AACATCAACC AGAGTAACAA CACCACCAAA ACACTCACCT CTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26928
Clone ID Related Accession (Same CDS sequence) XM_678493.7 , XM_678493.8
Accession Version XM_678493.7 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3384bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product minor histocompatibility protein HA-1 isoform X5
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_678493.6. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTCTCCA AAAAGACGAG GGAACTAATA AAGACGCACT CGATGTCTAA GAAGAGCCGA 
ACAGGAAGCA GCAACCCAGC GCCTCTCAGC TCTCCATCAC TGTCCGCTCT TCAAGAACAG 
CCTAGGAAAG ATGCAGTGGA CAGTGTCACC TCTTCATCCC AAACGTCCTC CAGTCTGTCT 
CCCCCTATCG TAGAGGTCTC GTCGTCCTGT CCAGGTACGC CTTTGACCCA GCACTCAAAG 
GCGCTGGGCT GCCCATCTCC GATGGGCACC CTGAAGCGGC CCACTTCTCT GAGTCGCAAT 
CCCAGCGCTG CCGGCTTCCC CATCCAATCT TGGGTGTTCA GTAAGGGTGC AGGAAAATCC 
GTCATTGCCC AGAGCCCTTC ACCAGAGACA GCTGACACCA CAGTGGCCAT CGAGGTGGAG 
GACATCCCGT CCCTGCTGCG CAGTGTGGAA CGCTTTGCCA AAGCGGTGGA GAAACTAAAG 
GATGTCGTGC TTGAAGATAA GCAGGAGAAC CGACGTCCGC TGGCTCACGA GTGTCTGGGT 
GAAGTGCTGC GGGTCCTGCG GCAGGTCATC AGCATGTACC CACTGCTCAA CACCGTGGAG 
ACGCTCACCG CTGCTGGAAA ACTCATCTCA CAGGTCAAAG GTTATCACTA TGAATCGTGC 
ATTGAACCAG AAAAGAAGGA TTTTGAGAAG GCCATTGAGA CAATCGCTGT GGCTTTCAGC 
AGCAATGTTT CGGAGCTGCT GATGGGAGAG GTGGACAGTA GTACACTGTT GTCAGTGGTG 
CCCACTGAGA AAAGCAGGTC TATGGAGAAT CTCTCTGGTC ATGGGTCTTC ACACACATGG 
GGTGATTCAT CTGAGCTGGC GATGAGCGCT GAAGAGGTGG ACATCATCCT GCAGCGCAGT 
GAAGGCGGTG TGGACTCCGC TCTGACGTAC GCTAAAACCA TCTCCAAATA CTTGAAGGAT 
CTCATCGGAT ACGTAGAGAG GAAGCTTGCG CTGGAGCTGG AGTTCTCCAA GGGTTTACAG 
AGGATCTATC AGTCGTGTAA ACAGACCATC ACACAGCCAC ACATGCCCTT CTTCACCATC 
TACTCTCAGG CACTGGAGCA GGATCTGGAG CAGAGCAATG GCATGCATCA GGCTGCCGCA 
ACTCTACAGA ACCAGACCTT TATCATGCCT CTGATGGTCC GCAAACAAGA GCATGAGAAG 
AAACGCAAAG AGATCAAGGA GCAGTGGCTG AAGGCCAAAA GAAAACTGAT GGAGTGTGAC 
GTGAACCTAC GCAGGGCTAA ACAGGTCTAC ATGACCCGCT GTGAAGAATA TGATAAAGCC 
AGGACAGCGG CGAACAGGGC CGAGGAGGAG GGCGGCAGTG CCACCACCAA AACACTGGAC 
AAGAAGAAAC GACTGGAGGA AGAGGCCAGA AACAAGGCTG AGGAAGCGGA GGCCACATAC 
CGGACCTGCA TTGCAGACGC TATCACTCAA CACCAGGAGC TAGAGCACAT GAAAGTCACT 
GTCCTGCGGG GGATTCAAGA GGTCATCAAG CAGACCGACC AGACCATTCG ATCTGCCACC 
ATCTCCTACT ACCAGATCAT GCACATGCAG ACGGTCGCGC TGCCGGTCCA CTACCAGACT 
CTGTGCGAGA GCAGTAAACA GTACGACCCG GGACAGCAGT ACGGCACGCA CGTCAAAGAC 
CTTCAGATGA GCGAAGAACC TGAAACGCAT TATGAGTTTG AGGCCTACTC TGCCTCCTCT 
GTCCAGCAGT CGGTTAGGCC GCGCACCGAC AGCGCTAATG CTGAAGCTCA GAGCAGTGCT 
GAGGTGCCAC AAACTGCAGG AGAGACTGGA GACACGAGCA GCTCACAGAA AGATGATCAG 
AAGAGGGCTC GAGGTCACAT GACTCACAAA TCCTGGGGCT CCACAGTGAG TGACACAGAC 
AGTGTAGGAG GAGGAAGTGG CCTGGAATCC CCGACTACCA GCACAGGTGA TATTAGTAAA 
ATGACCAGGA CGTCATCTAC AGGAACCATG TCATCAAATG AAGATATAGA TGAGAAAGAC 
GCAAATGTTA CTTCCTTTGA AACGCCAAAT ATAAATGGCA TTGAGCCTGA GATTGTGGTG 
CCCACTGGGC CCTTCAGGAA CATTGGCTTG TCAAAAGCCG CTCAGACGCA CAAACTGCGT 
AAACTGCGCT CTCCATCCAA ATGCAGAGAA TGTGACAGCT ACGTTTATTT CCAGGGAGCC 
GAGTGTGAGG AGTGTTTCCT GGCTTGTCAC AAACGCTGCT TGGAGACTAT AGCCATTCAG 
TGCGGCCACA AGAAGCTCCA GGGCCGCCTT CAGCTGTTCG GGCAGGATTT CTTGCAGGTG 
TCCAGCAACA GTCCCGATGG GATCCCCTTC ATAATCAAGA AGTGCATCGC TGAGATAGAG 
AGACGAGCTT TAAGGATGAA GGGCATTTAT CGAGTGAATG GAGTAAAGAC GCGGGTGGAG 
AAACTCTGCC AGGCATTTGA GAACGGCAAA GAGCTGGTCG AACTATCACA GTCATCTCCA 
CATGACATCA GTAATGTCCT GAAGCTTTAC CTGCGACAGC TTCCGGAGCC CATCATGCCC 
TTCCGCCTCT ACAACAGTCT CATGGGTCTG GCCAAGGAAA GTCTGGCTGT TGTGGGTCCA 
GAGGGAGCTG ACAGTGGTAA AGGACCAGAC CTGATGGACC TTGGACCTGA GACGGATCCT 
GAACTCTTGG TCCTCGTGGA CAGACTTAAA AATCTCCTGA AAGAGCTGCC CAAACCAAAC 
ACCGCCACGC TCCGCTACCT AGCGCGTCAT CTGAGGAGGA TTGCAGAACT GGAAGACGAC 
AATAAGATGA GTCCCAGTAA TCTGGGGATC GTGTTTGGCC CGTCACTGAT GCGGCCCCGG 
CCCTCGGGAG CCACAGTGTC TCTGTCCTCT CTGGTGGATT ACCCATATCA GGCCCGCATA 
GTGGAGACCC TCATCGTGTT TTATCCCTCC ATTTTTCAGT CAGAGTCCAG TCGGCCTGCA 
AGCAGCAGCA CCCGCACACA GTCTCTACAG CAGCAGAGCA GCATTGATGA AGAACGCTGC 
TCTAATGATG AACAAGGCCT CCCAGATGAA CCTGCAGCTG TTGAATTAGA CAAGCTGGAG 
GACCACGCAG AGAGTTGTAC AGGAACCCCA GACTCTCTGG AGCACAGTCT GGACTTGGAT 
TCAGACCCAG AGGCAGAGCA GCCTGTTGAT GAAACGTCTA TCCAAAGCAG GCCAGCGGTA 
CTCCTGGTGA CCCTGCAGAG CTCCAGCGCT GACCCTCCTG CCCTCCCTGA GAGCGAACCA 
CCAGAGCTGG AGGACCAGAG CCACTCACTA GCGGCCCTCA ACATCAACCA GAGTAACAAC 
ACCACCAAAA CACTCACCTC TTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_683585.5
CDS395..3778
Translation

Target ORF information:

RefSeq Version XM_678493.7
Organism Danio rerio(Zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_678493.7

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTCTCCA AAAAGACGAG GGAACTAATA AAGACGCACT CGATGTCTAA GAAGAGCCGA 
ACAGGAAGCA GCAACCCAGC GCCTCTCAGC TCTCCATCAC TGTCCGCTCT TCAAGAACAG 
CCTAGGAAAG ATGCAGTGGA CAGTGTCACC TCTTCATCCC AAACGTCCTC CAGTCTGTCT 
CCCCCTATCG TAGAGGTCTC GTCGTCCTGT CCAGGTACGC CTTTGACCCA GCACTCAAAG 
GCGCTGGGCT GCCCATCTCC GATGGGCACC CTGAAGCGGC CCACTTCTCT GAGTCGCAAT 
CCCAGCGCTG CCGGCTTCCC CATCCAATCT TGGGTGTTCA GTAAGGGTGC AGGAAAATCC 
GTCATTGCCC AGAGCCCTTC ACCAGAGACA GCTGACACCA CAGTGGCCAT CGAGGTGGAG 
GACATCCCGT CCCTGCTGCG CAGTGTGGAA CGCTTTGCCA AAGCGGTGGA GAAACTAAAG 
GATGTCGTGC TTGAAGATAA GCAGGAGAAC CGACGTCCGC TGGCTCACGA GTGTCTGGGT 
GAAGTGCTGC GGGTCCTGCG GCAGGTCATC AGCATGTACC CACTGCTCAA CACCGTGGAG 
ACGCTCACCG CTGCTGGAAA ACTCATCTCA CAGGTCAAAG GTTATCACTA TGAATCGTGC 
ATTGAACCAG AAAAGAAGGA TTTTGAGAAG GCCATTGAGA CAATCGCTGT GGCTTTCAGC 
AGCAATGTTT CGGAGCTGCT GATGGGAGAG GTGGACAGTA GTACACTGTT GTCAGTGGTG 
CCCACTGAGA AAAGCAGGTC TATGGAGAAT CTCTCTGGTC ATGGGTCTTC ACACACATGG 
GGTGATTCAT CTGAGCTGGC GATGAGCGCT GAAGAGGTGG ACATCATCCT GCAGCGCAGT 
GAAGGCGGTG TGGACTCCGC TCTGACGTAC GCTAAAACCA TCTCCAAATA CTTGAAGGAT 
CTCATCGGAT ACGTAGAGAG GAAGCTTGCG CTGGAGCTGG AGTTCTCCAA GGGTTTACAG 
AGGATCTATC AGTCGTGTAA ACAGACCATC ACACAGCCAC ACATGCCCTT CTTCACCATC 
TACTCTCAGG CACTGGAGCA GGATCTGGAG CAGAGCAATG GCATGCATCA GGCTGCCGCA 
ACTCTACAGA ACCAGACCTT TATCATGCCT CTGATGGTCC GCAAACAAGA GCATGAGAAG 
AAACGCAAAG AGATCAAGGA GCAGTGGCTG AAGGCCAAAA GAAAACTGAT GGAGTGTGAC 
GTGAACCTAC GCAGGGCTAA ACAGGTCTAC ATGACCCGCT GTGAAGAATA TGATAAAGCC 
AGGACAGCGG CGAACAGGGC CGAGGAGGAG GGCGGCAGTG CCACCACCAA AACACTGGAC 
AAGAAGAAAC GACTGGAGGA AGAGGCCAGA AACAAGGCTG AGGAAGCGGA GGCCACATAC 
CGGACCTGCA TTGCAGACGC TATCACTCAA CACCAGGAGC TAGAGCACAT GAAAGTCACT 
GTCCTGCGGG GGATTCAAGA GGTCATCAAG CAGACCGACC AGACCATTCG ATCTGCCACC 
ATCTCCTACT ACCAGATCAT GCACATGCAG ACGGTCGCGC TGCCGGTCCA CTACCAGACT 
CTGTGCGAGA GCAGTAAACA GTACGACCCG GGACAGCAGT ACGGCACGCA CGTCAAAGAC 
CTTCAGATGA GCGAAGAACC TGAAACGCAT TATGAGTTTG AGGCCTACTC TGCCTCCTCT 
GTCCAGCAGT CGGTTAGGCC GCGCACCGAC AGCGCTAATG CTGAAGCTCA GAGCAGTGCT 
GAGGTGCCAC AAACTGCAGG AGAGACTGGA GACACGAGCA GCTCACAGAA AGATGATCAG 
AAGAGGGCTC GAGGTCACAT GACTCACAAA TCCTGGGGCT CCACAGTGAG TGACACAGAC 
AGTGTAGGAG GAGGAAGTGG CCTGGAATCC CCGACTACCA GCACAGGTGA TATTAGTAAA 
ATGACCAGGA CGTCATCTAC AGGAACCATG TCATCAAATG AAGATATAGA TGAGAAAGAC 
GCAAATGTTA CTTCCTTTGA AACGCCAAAT ATAAATGGCA TTGAGCCTGA GATTGTGGTG 
CCCACTGGGC CCTTCAGGAA CATTGGCTTG TCAAAAGCCG CTCAGACGCA CAAACTGCGT 
AAACTGCGCT CTCCATCCAA ATGCAGAGAA TGTGACAGCT ACGTTTATTT CCAGGGAGCC 
GAGTGTGAGG AGTGTTTCCT GGCTTGTCAC AAACGCTGCT TGGAGACTAT AGCCATTCAG 
TGCGGCCACA AGAAGCTCCA GGGCCGCCTT CAGCTGTTCG GGCAGGATTT CTTGCAGGTG 
TCCAGCAACA GTCCCGATGG GATCCCCTTC ATAATCAAGA AGTGCATCGC TGAGATAGAG 
AGACGAGCTT TAAGGATGAA GGGCATTTAT CGAGTGAATG GAGTAAAGAC GCGGGTGGAG 
AAACTCTGCC AGGCATTTGA GAACGGCAAA GAGCTGGTCG AACTATCACA GTCATCTCCA 
CATGACATCA GTAATGTCCT GAAGCTTTAC CTGCGACAGC TTCCGGAGCC CATCATGCCC 
TTCCGCCTCT ACAACAGTCT CATGGGTCTG GCCAAGGAAA GTCTGGCTGT TGTGGGTCCA 
GAGGGAGCTG ACAGTGGTAA AGGACCAGAC CTGATGGACC TTGGACCTGA GACGGATCCT 
GAACTCTTGG TCCTCGTGGA CAGACTTAAA AATCTCCTGA AAGAGCTGCC CAAACCAAAC 
ACCGCCACGC TCCGCTACCT AGCGCGTCAT CTGAGGAGGA TTGCAGAACT GGAAGACGAC 
AATAAGATGA GTCCCAGTAA TCTGGGGATC GTGTTTGGCC CGTCACTGAT GCGGCCCCGG 
CCCTCGGGAG CCACAGTGTC TCTGTCCTCT CTGGTGGATT ACCCATATCA GGCCCGCATA 
GTGGAGACCC TCATCGTGTT TTATCCCTCC ATTTTTCAGT CAGAGTCCAG TCGGCCTGCA 
AGCAGCAGCA CCCGCACACA GTCTCTACAG CAGCAGAGCA GCATTGATGA AGAACGCTGC 
TCTAATGATG AACAAGGCCT CCCAGATGAA CCTGCAGCTG TTGAATTAGA CAAGCTGGAG 
GACCACGCAG AGAGTTGTAC AGGAACCCCA GACTCTCTGG AGCACAGTCT GGACTTGGAT 
TCAGACCCAG AGGCAGAGCA GCCTGTTGAT GAAACGTCTA TCCAAAGCAG GCCAGCGGTA 
CTCCTGGTGA CCCTGCAGAG CTCCAGCGCT GACCCTCCTG CCCTCCCTGA GAGCGAACCA 
CCAGAGCTGG AGGACCAGAG CCACTCACTA GCGGCCCTCA ACATCAACCA GAGTAACAAC 
ACCACCAAAA CACTCACCTC TTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa26928
Clone ID Related Accession (Same CDS sequence) XM_678493.7 , XM_678493.8
Accession Version XM_678493.8 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 3384bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product rho GTPase-activating protein 45 isoform X5
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_678493.7. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTCTCCA AAAAGACGAG GGAACTAATA AAGACGCACT CGATGTCTAA GAAGAGCCGA 
ACAGGAAGCA GCAACCCAGC GCCTCTCAGC TCTCCATCAC TGTCCGCTCT TCAAGAACAG 
CCTAGGAAAG ATGCAGTGGA CAGTGTCACC TCTTCATCCC AAACGTCCTC CAGTCTGTCT 
CCCCCTATCG TAGAGGTCTC GTCGTCCTGT CCAGGTACGC CTTTGACCCA GCACTCAAAG 
GCGCTGGGCT GCCCATCTCC GATGGGCACC CTGAAGCGGC CCACTTCTCT GAGTCGCAAT 
CCCAGCGCTG CCGGCTTCCC CATCCAATCT TGGGTGTTCA GTAAGGGTGC AGGAAAATCC 
GTCATTGCCC AGAGCCCTTC ACCAGAGACA GCTGACACCA CAGTGGCCAT CGAGGTGGAG 
GACATCCCGT CCCTGCTGCG CAGTGTGGAA CGCTTTGCCA AAGCGGTGGA GAAACTAAAG 
GATGTCGTGC TTGAAGATAA GCAGGAGAAC CGACGTCCGC TGGCTCACGA GTGTCTGGGT 
GAAGTGCTGC GGGTCCTGCG GCAGGTCATC AGCATGTACC CACTGCTCAA CACCGTGGAG 
ACGCTCACCG CTGCTGGAAA ACTCATCTCA CAGGTCAAAG GTTATCACTA TGAATCGTGC 
ATTGAACCAG AAAAGAAGGA TTTTGAGAAG GCCATTGAGA CAATCGCTGT GGCTTTCAGC 
AGCAATGTTT CGGAGCTGCT GATGGGAGAG GTGGACAGTA GTACACTGTT GTCAGTGGTG 
CCCACTGAGA AAAGCAGGTC TATGGAGAAT CTCTCTGGTC ATGGGTCTTC ACACACATGG 
GGTGATTCAT CTGAGCTGGC GATGAGCGCT GAAGAGGTGG ACATCATCCT GCAGCGCAGT 
GAAGGCGGTG TGGACTCCGC TCTGACGTAC GCTAAAACCA TCTCCAAATA CTTGAAGGAT 
CTCATCGGAT ACGTAGAGAG GAAGCTTGCG CTGGAGCTGG AGTTCTCCAA GGGTTTACAG 
AGGATCTATC AGTCGTGTAA ACAGACCATC ACACAGCCAC ACATGCCCTT CTTCACCATC 
TACTCTCAGG CACTGGAGCA GGATCTGGAG CAGAGCAATG GCATGCATCA GGCTGCCGCA 
ACTCTACAGA ACCAGACCTT TATCATGCCT CTGATGGTCC GCAAACAAGA GCATGAGAAG 
AAACGCAAAG AGATCAAGGA GCAGTGGCTG AAGGCCAAAA GAAAACTGAT GGAGTGTGAC 
GTGAACCTAC GCAGGGCTAA ACAGGTCTAC ATGACCCGCT GTGAAGAATA TGATAAAGCC 
AGGACAGCGG CGAACAGGGC CGAGGAGGAG GGCGGCAGTG CCACCACCAA AACACTGGAC 
AAGAAGAAAC GACTGGAGGA AGAGGCCAGA AACAAGGCTG AGGAAGCGGA GGCCACATAC 
CGGACCTGCA TTGCAGACGC TATCACTCAA CACCAGGAGC TAGAGCACAT GAAAGTCACT 
GTCCTGCGGG GGATTCAAGA GGTCATCAAG CAGACCGACC AGACCATTCG ATCTGCCACC 
ATCTCCTACT ACCAGATCAT GCACATGCAG ACGGTCGCGC TGCCGGTCCA CTACCAGACT 
CTGTGCGAGA GCAGTAAACA GTACGACCCG GGACAGCAGT ACGGCACGCA CGTCAAAGAC 
CTTCAGATGA GCGAAGAACC TGAAACGCAT TATGAGTTTG AGGCCTACTC TGCCTCCTCT 
GTCCAGCAGT CGGTTAGGCC GCGCACCGAC AGCGCTAATG CTGAAGCTCA GAGCAGTGCT 
GAGGTGCCAC AAACTGCAGG AGAGACTGGA GACACGAGCA GCTCACAGAA AGATGATCAG 
AAGAGGGCTC GAGGTCACAT GACTCACAAA TCCTGGGGCT CCACAGTGAG TGACACAGAC 
AGTGTAGGAG GAGGAAGTGG CCTGGAATCC CCGACTACCA GCACAGGTGA TATTAGTAAA 
ATGACCAGGA CGTCATCTAC AGGAACCATG TCATCAAATG AAGATATAGA TGAGAAAGAC 
GCAAATGTTA CTTCCTTTGA AACGCCAAAT ATAAATGGCA TTGAGCCTGA GATTGTGGTG 
CCCACTGGGC CCTTCAGGAA CATTGGCTTG TCAAAAGCCG CTCAGACGCA CAAACTGCGT 
AAACTGCGCT CTCCATCCAA ATGCAGAGAA TGTGACAGCT ACGTTTATTT CCAGGGAGCC 
GAGTGTGAGG AGTGTTTCCT GGCTTGTCAC AAACGCTGCT TGGAGACTAT AGCCATTCAG 
TGCGGCCACA AGAAGCTCCA GGGCCGCCTT CAGCTGTTCG GGCAGGATTT CTTGCAGGTG 
TCCAGCAACA GTCCCGATGG GATCCCCTTC ATAATCAAGA AGTGCATCGC TGAGATAGAG 
AGACGAGCTT TAAGGATGAA GGGCATTTAT CGAGTGAATG GAGTAAAGAC GCGGGTGGAG 
AAACTCTGCC AGGCATTTGA GAACGGCAAA GAGCTGGTCG AACTATCACA GTCATCTCCA 
CATGACATCA GTAATGTCCT GAAGCTTTAC CTGCGACAGC TTCCGGAGCC CATCATGCCC 
TTCCGCCTCT ACAACAGTCT CATGGGTCTG GCCAAGGAAA GTCTGGCTGT TGTGGGTCCA 
GAGGGAGCTG ACAGTGGTAA AGGACCAGAC CTGATGGACC TTGGACCTGA GACGGATCCT 
GAACTCTTGG TCCTCGTGGA CAGACTTAAA AATCTCCTGA AAGAGCTGCC CAAACCAAAC 
ACCGCCACGC TCCGCTACCT AGCGCGTCAT CTGAGGAGGA TTGCAGAACT GGAAGACGAC 
AATAAGATGA GTCCCAGTAA TCTGGGGATC GTGTTTGGCC CGTCACTGAT GCGGCCCCGG 
CCCTCGGGAG CCACAGTGTC TCTGTCCTCT CTGGTGGATT ACCCATATCA GGCCCGCATA 
GTGGAGACCC TCATCGTGTT TTATCCCTCC ATTTTTCAGT CAGAGTCCAG TCGGCCTGCA 
AGCAGCAGCA CCCGCACACA GTCTCTACAG CAGCAGAGCA GCATTGATGA AGAACGCTGC 
TCTAATGATG AACAAGGCCT CCCAGATGAA CCTGCAGCTG TTGAATTAGA CAAGCTGGAG 
GACCACGCAG AGAGTTGTAC AGGAACCCCA GACTCTCTGG AGCACAGTCT GGACTTGGAT 
TCAGACCCAG AGGCAGAGCA GCCTGTTGAT GAAACGTCTA TCCAAAGCAG GCCAGCGGTA 
CTCCTGGTGA CCCTGCAGAG CTCCAGCGCT GACCCTCCTG CCCTCCCTGA GAGCGAACCA 
CCAGAGCTGG AGGACCAGAG CCACTCACTA GCGGCCCTCA ACATCAACCA GAGTAACAAC 
ACCACCAAAA CACTCACCTC TTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_683585.5
CDS405..3788
Translation

Target ORF information:

RefSeq Version XM_678493.8
Organism Danio rerio(zebrafish)
Definition Danio rerio histocompatibility (minor) HA-1 b (hmha1b), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_678493.8

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
ATGTTCTCCA AAAAGACGAG GGAACTAATA AAGACGCACT CGATGTCTAA GAAGAGCCGA 
ACAGGAAGCA GCAACCCAGC GCCTCTCAGC TCTCCATCAC TGTCCGCTCT TCAAGAACAG 
CCTAGGAAAG ATGCAGTGGA CAGTGTCACC TCTTCATCCC AAACGTCCTC CAGTCTGTCT 
CCCCCTATCG TAGAGGTCTC GTCGTCCTGT CCAGGTACGC CTTTGACCCA GCACTCAAAG 
GCGCTGGGCT GCCCATCTCC GATGGGCACC CTGAAGCGGC CCACTTCTCT GAGTCGCAAT 
CCCAGCGCTG CCGGCTTCCC CATCCAATCT TGGGTGTTCA GTAAGGGTGC AGGAAAATCC 
GTCATTGCCC AGAGCCCTTC ACCAGAGACA GCTGACACCA CAGTGGCCAT CGAGGTGGAG 
GACATCCCGT CCCTGCTGCG CAGTGTGGAA CGCTTTGCCA AAGCGGTGGA GAAACTAAAG 
GATGTCGTGC TTGAAGATAA GCAGGAGAAC CGACGTCCGC TGGCTCACGA GTGTCTGGGT 
GAAGTGCTGC GGGTCCTGCG GCAGGTCATC AGCATGTACC CACTGCTCAA CACCGTGGAG 
ACGCTCACCG CTGCTGGAAA ACTCATCTCA CAGGTCAAAG GTTATCACTA TGAATCGTGC 
ATTGAACCAG AAAAGAAGGA TTTTGAGAAG GCCATTGAGA CAATCGCTGT GGCTTTCAGC 
AGCAATGTTT CGGAGCTGCT GATGGGAGAG GTGGACAGTA GTACACTGTT GTCAGTGGTG 
CCCACTGAGA AAAGCAGGTC TATGGAGAAT CTCTCTGGTC ATGGGTCTTC ACACACATGG 
GGTGATTCAT CTGAGCTGGC GATGAGCGCT GAAGAGGTGG ACATCATCCT GCAGCGCAGT 
GAAGGCGGTG TGGACTCCGC TCTGACGTAC GCTAAAACCA TCTCCAAATA CTTGAAGGAT 
CTCATCGGAT ACGTAGAGAG GAAGCTTGCG CTGGAGCTGG AGTTCTCCAA GGGTTTACAG 
AGGATCTATC AGTCGTGTAA ACAGACCATC ACACAGCCAC ACATGCCCTT CTTCACCATC 
TACTCTCAGG CACTGGAGCA GGATCTGGAG CAGAGCAATG GCATGCATCA GGCTGCCGCA 
ACTCTACAGA ACCAGACCTT TATCATGCCT CTGATGGTCC GCAAACAAGA GCATGAGAAG 
AAACGCAAAG AGATCAAGGA GCAGTGGCTG AAGGCCAAAA GAAAACTGAT GGAGTGTGAC 
GTGAACCTAC GCAGGGCTAA ACAGGTCTAC ATGACCCGCT GTGAAGAATA TGATAAAGCC 
AGGACAGCGG CGAACAGGGC CGAGGAGGAG GGCGGCAGTG CCACCACCAA AACACTGGAC 
AAGAAGAAAC GACTGGAGGA AGAGGCCAGA AACAAGGCTG AGGAAGCGGA GGCCACATAC 
CGGACCTGCA TTGCAGACGC TATCACTCAA CACCAGGAGC TAGAGCACAT GAAAGTCACT 
GTCCTGCGGG GGATTCAAGA GGTCATCAAG CAGACCGACC AGACCATTCG ATCTGCCACC 
ATCTCCTACT ACCAGATCAT GCACATGCAG ACGGTCGCGC TGCCGGTCCA CTACCAGACT 
CTGTGCGAGA GCAGTAAACA GTACGACCCG GGACAGCAGT ACGGCACGCA CGTCAAAGAC 
CTTCAGATGA GCGAAGAACC TGAAACGCAT TATGAGTTTG AGGCCTACTC TGCCTCCTCT 
GTCCAGCAGT CGGTTAGGCC GCGCACCGAC AGCGCTAATG CTGAAGCTCA GAGCAGTGCT 
GAGGTGCCAC AAACTGCAGG AGAGACTGGA GACACGAGCA GCTCACAGAA AGATGATCAG 
AAGAGGGCTC GAGGTCACAT GACTCACAAA TCCTGGGGCT CCACAGTGAG TGACACAGAC 
AGTGTAGGAG GAGGAAGTGG CCTGGAATCC CCGACTACCA GCACAGGTGA TATTAGTAAA 
ATGACCAGGA CGTCATCTAC AGGAACCATG TCATCAAATG AAGATATAGA TGAGAAAGAC 
GCAAATGTTA CTTCCTTTGA AACGCCAAAT ATAAATGGCA TTGAGCCTGA GATTGTGGTG 
CCCACTGGGC CCTTCAGGAA CATTGGCTTG TCAAAAGCCG CTCAGACGCA CAAACTGCGT 
AAACTGCGCT CTCCATCCAA ATGCAGAGAA TGTGACAGCT ACGTTTATTT CCAGGGAGCC 
GAGTGTGAGG AGTGTTTCCT GGCTTGTCAC AAACGCTGCT TGGAGACTAT AGCCATTCAG 
TGCGGCCACA AGAAGCTCCA GGGCCGCCTT CAGCTGTTCG GGCAGGATTT CTTGCAGGTG 
TCCAGCAACA GTCCCGATGG GATCCCCTTC ATAATCAAGA AGTGCATCGC TGAGATAGAG 
AGACGAGCTT TAAGGATGAA GGGCATTTAT CGAGTGAATG GAGTAAAGAC GCGGGTGGAG 
AAACTCTGCC AGGCATTTGA GAACGGCAAA GAGCTGGTCG AACTATCACA GTCATCTCCA 
CATGACATCA GTAATGTCCT GAAGCTTTAC CTGCGACAGC TTCCGGAGCC CATCATGCCC 
TTCCGCCTCT ACAACAGTCT CATGGGTCTG GCCAAGGAAA GTCTGGCTGT TGTGGGTCCA 
GAGGGAGCTG ACAGTGGTAA AGGACCAGAC CTGATGGACC TTGGACCTGA GACGGATCCT 
GAACTCTTGG TCCTCGTGGA CAGACTTAAA AATCTCCTGA AAGAGCTGCC CAAACCAAAC 
ACCGCCACGC TCCGCTACCT AGCGCGTCAT CTGAGGAGGA TTGCAGAACT GGAAGACGAC 
AATAAGATGA GTCCCAGTAA TCTGGGGATC GTGTTTGGCC CGTCACTGAT GCGGCCCCGG 
CCCTCGGGAG CCACAGTGTC TCTGTCCTCT CTGGTGGATT ACCCATATCA GGCCCGCATA 
GTGGAGACCC TCATCGTGTT TTATCCCTCC ATTTTTCAGT CAGAGTCCAG TCGGCCTGCA 
AGCAGCAGCA CCCGCACACA GTCTCTACAG CAGCAGAGCA GCATTGATGA AGAACGCTGC 
TCTAATGATG AACAAGGCCT CCCAGATGAA CCTGCAGCTG TTGAATTAGA CAAGCTGGAG 
GACCACGCAG AGAGTTGTAC AGGAACCCCA GACTCTCTGG AGCACAGTCT GGACTTGGAT 
TCAGACCCAG AGGCAGAGCA GCCTGTTGAT GAAACGTCTA TCCAAAGCAG GCCAGCGGTA 
CTCCTGGTGA CCCTGCAGAG CTCCAGCGCT GACCCTCCTG CCCTCCCTGA GAGCGAACCA 
CCAGAGCTGG AGGACCAGAG CCACTCACTA GCGGCCCTCA ACATCAACCA GAGTAACAAC 
ACCACCAAAA CACTCACCTC TTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed