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rab36 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol rab36
Entrez Gene ID 780839
Full Name RAB36, member RAS oncogene family
Synonyms zgc:158229
General protein information
Preferred Names

RAB36, member RAS oncogene family

Names

ras-related protein Rab-36
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_009305208.1 XP_009303483.1 ras-related protein Rab-36 isoform X1
XM_009305208.2 XP_009303483.1 ras-related protein Rab-36 isoform X1
NM_001079660.1 NP_001073128.1 ras-related protein Rab-36

Pathways from BioSystems


Homologies


Rattus norvegicus (Norway rat) Rab36 NP_001103059.1
Gallus gallus (chicken) RAB36 XP_004934409.1
Danio rerio (zebrafish) rab36 NP_001073128.1
Drosophila melanogaster (fruit fly) RabX5 NP_647644.2
Pan troglodytes (chimpanzee) RAB36 XP_001169301.1
Bos taurus (cattle) RAB36 XP_002694743.2
Homo sapiens (human) RAB36 NP_004905.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP006035 XP_316080.4
Xenopus tropicalis (tropical clawed frog) rab36 XP_004910645.1
Mus musculus (house mouse) Rab36 NP_084057.1
Canis lupus familiaris (dog) RAB36 XP_005636607.1

Gene Ontology


Bibliography

Related articles in PubMed

A plasmid library of full-length zebrafish rab proteins for
Hall TE, Martel N, Lo HP, Xiong Z, Parton RG
Cellular logistics7(1)e1301151(2017)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

RNA-sequencing analysis of TCDD-induced responses in zebrafish liver reveals high relatedness to in vivo mammalian models and conserved biological pathways.
Li ZH, Xu H, Zheng W, Lam SH, Gong Z
PloS one8(10)e77292(2013)

Comparative analysis of the testis and ovary transcriptomes in zebrafish by combining experimental and computational tools.
Li Y, Chia JM, Bartfai R, Christoffels A, Yue GH, Ding K, Ho MY, Hill JA, Stupka E, Orban L
Comparative and functional genomics5(5)403-18(2004)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rab36 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rab36 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa01561 NM_001079660.1
Latest version!		 Danio rerio RAB36, member RAS oncogene family (rab36), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa46598 XM_009305208.2
Latest version!		 Danio rerio RAB36, member RAS oncogene family (rab36), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
View Old Accession Versions >>
ODa46598 XM_009305208.1 Danio rerio RAB36, member RAS oncogene family (rab36), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa01561
Clone ID Related Accession (Same CDS sequence) NM_001079660.1
Accession Version NM_001079660.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 789bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-09-21
Organism Danio rerio(zebrafish)
Product ras-related protein Rab-36
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC127570.1. ##Evidence-Data-START## Transcript exon combination :: BC127570.1, EH437993.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGCAGTTCA GTCCACCTGT CAGCAGAGAC AGGATCATAT CCGCATTTCC AAAGTGTTAT 
AATCCACAAG CTTGCCTGCA AATGAAGGAT GACTGGAATG TAGAAGCCAA GGTGGCTTGC 
CAAGATCGGA CGACTCGTCT GCAAGGGTAT GACAGGTTTA AGATGTCAAA GGCAGTAGTG 
GTTGGAGATC TCAATGTGGG AAAGACATGC TTAATAAACA GGTTCTGTAA AGACGTGTTT 
GAGAGAGACT ATAAGGCTAC TATAGGTGTT GATTTTGAGA TCGAGAGATT TGAGATGTCT 
GGGCTGCCTT TTTCTCTTCA AATATGGGAC ACCGCTGGTC AAGAAAAGTT TAAATGCATT 
GCATCAGCAT ATTACAGAGG AGCTCAAGTT ATTATCACTG TCTTTGACAT GGCGGATATT 
AAGACCTTGG AAAACACAAA ACAGTGGTTG TTAGAGGCGG TGCGGGAAAA TGAACCAGAC 
TCCTGTTTTG TTTTCTTGGT TGGCACAAAA AGAGACCTCC TGTCTACAGA AGAGTGCCAG 
AGGACCGAGA GGGACGCCGT AAAGATTGCA GCAGAAATGA ATGCAGAATT CTGGTCAGTG 
TCCTCAAAAA CAGGTGAAAA CGTCCAAGAG TTTTTCTTTC GTGTGGCTGC TCTGGCTTTT 
GAAGATGCTG TCATGAAGGA CCTGGAGTCT GGGACCACCA GCAGCACTCA GATCGGAGAT 
GGCAGTATTC TCAATGATAA AACACTGGAA GTCACGCAGG AGAAGCCAAA GAAGAAGAGC 
TGTTGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001073128.1
CDS75..863
Translation

Target ORF information:

RefSeq Version NM_001079660.1
Organism Danio rerio(zebrafish)
Definition Danio rerio RAB36, member RAS oncogene family (rab36), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001079660.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGCAGTTCA GTCCACCTGT CAGCAGAGAC AGGATCATAT CCGCATTTCC AAAGTGTTAT 
AATCCACAAG CTTGCCTGCA AATGAAGGAT GACTGGAATG TAGAAGCCAA GGTGGCTTGC 
CAAGATCGGA CGACTCGTCT GCAAGGGTAT GACAGGTTTA AGATGTCAAA GGCAGTAGTG 
GTTGGAGATC TCAATGTGGG AAAGACATGC TTAATAAACA GGTTCTGTAA AGACGTGTTT 
GAGAGAGACT ATAAGGCTAC TATAGGTGTT GATTTTGAGA TCGAGAGATT TGAGATGTCT 
GGGCTGCCTT TTTCTCTTCA AATATGGGAC ACCGCTGGTC AAGAAAAGTT TAAATGCATT 
GCATCAGCAT ATTACAGAGG AGCTCAAGTT ATTATCACTG TCTTTGACAT GGCGGATATT 
AAGACCTTGG AAAACACAAA ACAGTGGTTG TTAGAGGCGG TGCGGGAAAA TGAACCAGAC 
TCCTGTTTTG TTTTCTTGGT TGGCACAAAA AGAGACCTCC TGTCTACAGA AGAGTGCCAG 
AGGACCGAGA GGGACGCCGT AAAGATTGCA GCAGAAATGA ATGCAGAATT CTGGTCAGTG 
TCCTCAAAAA CAGGTGAAAA CGTCCAAGAG TTTTTCTTTC GTGTGGCTGC TCTGGCTTTT 
GAAGATGCTG TCATGAAGGA CCTGGAGTCT GGGACCACCA GCAGCACTCA GATCGGAGAT 
GGCAGTATTC TCAATGATAA AACACTGGAA GTCACGCAGG AGAAGCCAAA GAAGAAGAGC 
TGTTGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa46598
Clone ID Related Accession (Same CDS sequence) XM_009305208.1 , XM_009305208.2
Accession Version XM_009305208.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 687bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product ras-related protein Rab-36 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
ATGCAGTTCA GTCCACCTGT CAGCAGAGAC AGGATCATAT CCGCATTTCC AAAGTGTTAT 
AATCCACAAG CTTGCCTGCA AATGAAGGAT GACTGGAATG TAGAAGCCAA GGTGGCTTGC 
CAAGATCGGA CGACTCGTCT GCAAGGGTAT GACAGGTTTA AGATGTCAAA GGCAGTAGTG 
GTTGGAGATC TCAATGTGGG AAAGACATGC TTAATAAACA GATGGGACAC CGCTGGTCAA 
GAAAAGTTTA AATGCATTGC ATCAGCATAT TACAGAGGAG CTCAAGTTAT TATCACTGTC 
TTTGACATGG CGGATATTAA GACCTTGGAA AACACAAAAC AGTGGTTGTT AGAGGCGGTG 
CGGGAAAATG AACCAGACTC CTGTTTTGTT TTCTTGGTTG GCACAAAAAG AGACCTCCTG 
TCTACAGAAG AGTGCCAGAG GACCGAGAGG GACGCCGTAA AGATTGCAGC AGAAATGAAT 
GCAGAATTCT GGTCAGTGTC CTCAAAAACA GGTGAAAACG TCCAAGAGTT TTTCTTCCGT 
GTGGCTGCTC TGGCTTTTGA AGATGCTGTC ATGAAGGACC TGGAGTCTGG GACCACCAGC 
AGCACTCAGA TCGGAGATGG CAGTATTCTC AATGATAAAA CACTGGAAGT CACGCAGGAG 
AAGCCAAAGA AGAAGAGCTG TTGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009303483.1
CDS121..807
Translation

Target ORF information:

RefSeq Version XM_009305208.1
Organism Danio rerio(Zebrafish)
Definition Danio rerio RAB36, member RAS oncogene family (rab36), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009305208.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGCAGTTCA GTCCACCTGT CAGCAGAGAC AGGATCATAT CCGCATTTCC AAAGTGTTAT 
AATCCACAAG CTTGCCTGCA AATGAAGGAT GACTGGAATG TAGAAGCCAA GGTGGCTTGC 
CAAGATCGGA CGACTCGTCT GCAAGGGTAT GACAGGTTTA AGATGTCAAA GGCAGTAGTG 
GTTGGAGATC TCAATGTGGG AAAGACATGC TTAATAAACA GATGGGACAC CGCTGGTCAA 
GAAAAGTTTA AATGCATTGC ATCAGCATAT TACAGAGGAG CTCAAGTTAT TATCACTGTC 
TTTGACATGG CGGATATTAA GACCTTGGAA AACACAAAAC AGTGGTTGTT AGAGGCGGTG 
CGGGAAAATG AACCAGACTC CTGTTTTGTT TTCTTGGTTG GCACAAAAAG AGACCTCCTG 
TCTACAGAAG AGTGCCAGAG GACCGAGAGG GACGCCGTAA AGATTGCAGC AGAAATGAAT 
GCAGAATTCT GGTCAGTGTC CTCAAAAACA GGTGAAAACG TCCAAGAGTT TTTCTTCCGT 
GTGGCTGCTC TGGCTTTTGA AGATGCTGTC ATGAAGGACC TGGAGTCTGG GACCACCAGC 
AGCACTCAGA TCGGAGATGG CAGTATTCTC AATGATAAAA CACTGGAAGT CACGCAGGAG 
AAGCCAAAGA AGAAGAGCTG TTGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa46598
Clone ID Related Accession (Same CDS sequence) XM_009305208.1 , XM_009305208.2
Accession Version XM_009305208.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 687bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product ras-related protein Rab-36 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009305208.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
ATGCAGTTCA GTCCACCTGT CAGCAGAGAC AGGATCATAT CCGCATTTCC AAAGTGTTAT 
AATCCACAAG CTTGCCTGCA AATGAAGGAT GACTGGAATG TAGAAGCCAA GGTGGCTTGC 
CAAGATCGGA CGACTCGTCT GCAAGGGTAT GACAGGTTTA AGATGTCAAA GGCAGTAGTG 
GTTGGAGATC TCAATGTGGG AAAGACATGC TTAATAAACA GATGGGACAC CGCTGGTCAA 
GAAAAGTTTA AATGCATTGC ATCAGCATAT TACAGAGGAG CTCAAGTTAT TATCACTGTC 
TTTGACATGG CGGATATTAA GACCTTGGAA AACACAAAAC AGTGGTTGTT AGAGGCGGTG 
CGGGAAAATG AACCAGACTC CTGTTTTGTT TTCTTGGTTG GCACAAAAAG AGACCTCCTG 
TCTACAGAAG AGTGCCAGAG GACCGAGAGG GACGCCGTAA AGATTGCAGC AGAAATGAAT 
GCAGAATTCT GGTCAGTGTC CTCAAAAACA GGTGAAAACG TCCAAGAGTT TTTCTTCCGT 
GTGGCTGCTC TGGCTTTTGA AGATGCTGTC ATGAAGGACC TGGAGTCTGG GACCACCAGC 
AGCACTCAGA TCGGAGATGG CAGTATTCTC AATGATAAAA CACTGGAAGT CACGCAGGAG 
AAGCCAAAGA AGAAGAGCTG TTGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009303483.1
CDS140..826
Translation

Target ORF information:

RefSeq Version XM_009305208.2
Organism Danio rerio(zebrafish)
Definition Danio rerio RAB36, member RAS oncogene family (rab36), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009305208.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGCAGTTCA GTCCACCTGT CAGCAGAGAC AGGATCATAT CCGCATTTCC AAAGTGTTAT 
AATCCACAAG CTTGCCTGCA AATGAAGGAT GACTGGAATG TAGAAGCCAA GGTGGCTTGC 
CAAGATCGGA CGACTCGTCT GCAAGGGTAT GACAGGTTTA AGATGTCAAA GGCAGTAGTG 
GTTGGAGATC TCAATGTGGG AAAGACATGC TTAATAAACA GATGGGACAC CGCTGGTCAA 
GAAAAGTTTA AATGCATTGC ATCAGCATAT TACAGAGGAG CTCAAGTTAT TATCACTGTC 
TTTGACATGG CGGATATTAA GACCTTGGAA AACACAAAAC AGTGGTTGTT AGAGGCGGTG 
CGGGAAAATG AACCAGACTC CTGTTTTGTT TTCTTGGTTG GCACAAAAAG AGACCTCCTG 
TCTACAGAAG AGTGCCAGAG GACCGAGAGG GACGCCGTAA AGATTGCAGC AGAAATGAAT 
GCAGAATTCT GGTCAGTGTC CTCAAAAACA GGTGAAAACG TCCAAGAGTT TTTCTTCCGT 
GTGGCTGCTC TGGCTTTTGA AGATGCTGTC ATGAAGGACC TGGAGTCTGG GACCACCAGC 
AGCACTCAGA TCGGAGATGG CAGTATTCTC AATGATAAAA CACTGGAAGT CACGCAGGAG 
AAGCCAAAGA AGAAGAGCTG TTGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A plasmid library of full-length zebrafish rab proteins for
Cellular logistics7(1)e1301151(2017)
Hall TE,Martel N,Lo HP,Xiong Z,Parton RG


book

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R


book

RNA-sequencing analysis of TCDD-induced responses in zebrafish liver reveals high relatedness to in vivo mammalian models and conserved biological pathways.
PloS one8(10)e77292(2013)
Li ZH,Xu H,Zheng W,Lam SH,Gong Z


book

Comparative analysis of the testis and ovary transcriptomes in zebrafish by combining experimental and computational tools.
Comparative and functional genomics5(5)403-18(2004)
Li Y,Chia JM,Bartfai R,Christoffels A,Yue GH,Ding K,Ho MY,Hill JA,Stupka E,Orban L