Gene Symbol | SPATA13 |
Entrez Gene ID | 221178 |
Full Name | spermatogenesis associated 13 |
Synonyms | ARHGEF29,ASEF2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » SPATA13 cDNA ORF clone
gRNAs
Gene Symbol | SPATA13 |
Entrez Gene ID | 221178 |
Full Name | spermatogenesis associated 13 |
Synonyms | ARHGEF29,ASEF2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_153023.3 | NP_694568.1 | spermatogenesis-associated protein 13 isoform 2 |
NM_001166271.3 | NP_001159743.1 | spermatogenesis-associated protein 13 isoform 1 |
NM_153023.4 | NP_694568.1 | spermatogenesis-associated protein 13 isoform 2 |
NM_001286792.1 | NP_001273721.1 | spermatogenesis-associated protein 13 isoform 3 |
NM_001286795.2 | NP_001273724.1 | spermatogenesis-associated protein 13 isoform 6 |
NM_001286793.2 | NP_001273722.1 | spermatogenesis-associated protein 13 isoform 4 |
NM_001166271.2 | NP_001159743.1 | spermatogenesis-associated protein 13 isoform 1 |
NM_001286793.1 | NP_001273722.1 | spermatogenesis-associated protein 13 isoform 4 |
NM_001286792.2 | NP_001273721.1 | spermatogenesis-associated protein 13 isoform 3 |
NM_001286794.1 | NP_001273723.1 | spermatogenesis-associated protein 13 isoform 5 |
NM_001286795.1 | NP_001273724.1 | spermatogenesis-associated protein 13 isoform 6 |
Bos taurus (cattle) | LOC785769 | XP_005213877.1 |
Pan troglodytes (chimpanzee) | SPATA13 | XP_001152034.2 |
SPATA13 | XP_002800729.1 | |
Gallus gallus (chicken) | SPATA13 | XP_417134.3 |
Xenopus tropicalis (tropical clawed frog) | LOC100485539 | XP_004912116.1 |
Rattus norvegicus (Norway rat) | Spata13 | NP_001178615.1 |
Canis lupus familiaris (dog) | SPATA13 | XP_005635600.1 |
Homo sapiens (human) | SPATA13 | NP_001273721.1 |
Mus musculus (house mouse) | Spata13 | NP_001028444.1 |
Danio rerio (zebrafish) | spata13 | XP_005162798.1 |
Phosphorylation of serine 106 in Asef2 regulates cell migration and adhesion turnover.
Evans JC, Hines KM, Forsythe JG, Erdogan B, Shi M, Hill S, Rose KL, McLean JA, Webb DJ
Journal of proteome research13(7)3303-13(2014 Jul)
GABRA1 and STXBP1: novel genetic causes of Dravet syndrome.
Carvill GL, Weckhuysen S, McMahon JM, Hartmann C, M?ller RS, Hjalgrim H, Cook J, Geraghty E, O'Roak BJ, Petrou S, Clarke A, Gill D, Sadleir LG, Muhle H, von Spiczak S, Nikanorova M, Hodgson BL, Gazina EV, Suls A, Shendure J, Dibbens LM, De Jonghe P, Helbig I, Berkovic SF, Scheffer IE, Mefford HC
Neurology82(14)1245-53(2014 Apr)
Activation of Rac by Asef2 promotes myosin II-dependent contractility to inhibit cell migration on type I collagen.
Jean L, Majumdar D, Shi M, Hinkle LE, Diggins NL, Ao M, Broussard JA, Evans JC, Choma DP, Webb DJ
Journal of cell science126(Pt 24)5585-97(2013 Dec)
The Rho-family GEF Asef2 activates Rac to modulate adhesion and actin dynamics and thereby regulate cell migration.
Bristow JM, Sellers MH, Majumdar D, Anderson B, Hu L, Webb DJ
Journal of cell science122(Pt 24)4535-46(2009 Dec)
Asef2 and Neurabin2 cooperatively regulate actin cytoskeletal organization and are involved in HGF-induced cell migration.
Sagara M, Kawasaki Y, Iemura SI, Natsume T, Takai Y, Akiyama T
Oncogene28(10)1357-65(2009 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Phosphorylation of S106 modulates Asef2 guanine nucleotide exchange factor activity and Asef2-mediated cell migration and adhesion turnover.
Title: Phosphorylation of serine 106 in Asef2 regulates cell migration and adhesion turnover.
A new role for Rac activation, promoted by Asef2, in modulating actomyosin contractility.
Title: Activation of Rac by Asef2 promotes myosin II-dependent contractility to inhibit cell migration on type I collagen.
Observational study of gene-disease association. (HuGE Navigator)
Title: Confirmation of genomewide association signals in Chinese Han population reveals risk loci for ischemic stroke.
Asef2 activates Rac1 to modulate adhesion and actin dynamics and thereby regulate cell migration.
Title: The Rho-family GEF Asef2 activates Rac to modulate adhesion and actin dynamics and thereby regulate cell migration.
Asef2, Neurabin2 and APC cooperatively regulate actin cytoskeletal organization and are required for HGF-induced cell migration.
Title: Asef2 and Neurabin2 cooperatively regulate actin cytoskeletal organization and are involved in HGF-induced cell migration.
The following SPATA13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SPATA13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu10883![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_153023.3 , NM_153023.4 | |
Accession Version | NM_153023.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1959bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-23 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP201334.1, AK092754.1, AK055770.1 and AL359736.19. On Nov 15, 2013 this sequence version replaced NM_153023.2. Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' reading frame, and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK055770.1, BK006072.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1970526 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGACTTCTG CCAGCCCTGA AGACCAGAAT GCTCCAGTGG GCTGCCCCAA AGGAGCCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_694568.1 |
CDS | 440..2398 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACTTCTG CCAGCCCTGA AGACCAGAAT GCTCCAGTGG GCTGCCCCAA AGGAGCCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10883![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_153023.3 , NM_153023.4 | |
Accession Version | NM_153023.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1959bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP201334.1, AK092754.1, AK055770.1 and AL359736.19. On May 31, 2019 this sequence version replaced NM_153023.3. Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' reading frame, and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BK006072.1, AK055770.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1970526 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGACTTCTG CCAGCCCTGA AGACCAGAAT GCTCCAGTGG GCTGCCCCAA AGGAGCCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_694568.1 |
CDS | 436..2394 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACTTCTG CCAGCCCTGA AGACCAGAAT GCTCCAGTGG GCTGCCCCAA AGGAGCCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10977 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286793.2 , NM_001286793.1 | |
Accession Version | NM_001286793.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1539bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK297394.1, AK055770.1 and AL359736.19. On May 31, 2019 this sequence version replaced NM_001286793.1. Transcript Variant: This variant (4) differs in the 5' UTR and contains multiple differences in the coding region, compared to variant 1, including the lack of multiple 5' coding exons. It represents use of an alternate promoter and initiates translation at an alternate start codon. The encoded isoform (4) has a distinct N-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK297394.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA2142363 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273722.1 |
CDS | 109..1647 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10977 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286793.2 , NM_001286793.1 | |
Accession Version | NM_001286793.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1539bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL359736.19, AK297394.1 and AK055770.1. Transcript Variant: This variant (4) differs in the 5' UTR and contains multiple differences in the coding region, compared to variant 1, including the lack of multiple 5' coding exons. It represents use of an alternate promoter and initiates translation at an alternate start codon. The encoded isoform (4) has a distinct N-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK297394.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA2142363 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273722.1 |
CDS | 172..1710 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12746 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286795.2 , NM_001286795.1 | |
Accession Version | NM_001286795.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1725bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL359736.19 and AK123031.1. On May 31, 2019 this sequence version replaced NM_001286795.1. Transcript Variant: This variant (6) differs in the 5' UTR and lacks multiple 5' coding exons, compared to variant 1. It represents use of an alternate promoter and initiates translation at an alternate start codon. The encoded isoform (6) has a distinct N-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1803614.144095.1, SRR1803614.33359.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273724.1 |
CDS | 109..1833 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12746 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286795.2 , NM_001286795.1 | |
Accession Version | NM_001286795.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1725bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL359736.19 and AK123031.1. On Nov 15, 2013 this sequence version replaced XM_005266292.1. Transcript Variant: This variant (6) differs in the 5' UTR and lacks multiple 5' coding exons, compared to variant 1. It represents use of an alternate promoter and initiates translation at an alternate start codon. The encoded isoform (6) has a distinct N-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1803614.144095.1, SRR1803614.33359.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273724.1 |
CDS | 172..1896 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTAGCTA GAGGGGAGAT AGCAAGATTC TGGAGTCTGG AAAGCCTTCA CTTGGTTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12793 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286794.1 | |
Accession Version | NM_001286794.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1791bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL359736.19, AK298717.1 and AK055770.1. On Nov 15, 2013 this sequence version replaced XM_005266291.1. Transcript Variant: This variant (5) differs in the 5' UTR and lacks multiple 5' coding exons, compared to variant 1. It represents use of an alternate promoter and initiates translation at an alternate start codon. The encoded isoform (5) has a distinct N-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK298717.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA2142670 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGTTTTA TCATCCACAT TCAACAGGTG AAAAAACAAA GAAAGAAACT TGACCAAGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273723.1 |
CDS | 314..2104 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGGTTTTA TCATCCACAT TCAACAGGTG AAAAAACAAA GAAAGAAACT TGACCAAGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu14815 | |
Clone ID Related Accession (Same CDS sequence) | NM_001166271.3 , NM_001166271.2 | |
Accession Version | NM_001166271.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3834bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-30 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP201334.1, AK092754.1, AL359736.19, DB221004.1 and AK055770.1. On Nov 23, 2018 this sequence version replaced NM_001166271.2. Transcript Variant: This variant (1) encodes isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## CDS exon combination :: BX648244.1, SRR1803614.140528.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1968968 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology MANE Ensembl match :: ENST00000382108.8/ ENSP00000371542.3 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGACCCAGG CTGCCGTGCG GCCCTGGGCA CCCTGCCTGG AGAACATGAC CACTGCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001159743.1 |
CDS | 325..4158 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCCAGG CTGCCGTGCG GCCCTGGGCA CCCTGCCTGG AGAACATGAC CACTGCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu14815 | |
Clone ID Related Accession (Same CDS sequence) | NM_001166271.3 , NM_001166271.2 | |
Accession Version | NM_001166271.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3834bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-02 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP201334.1, AK092754.1, AL359736.19, DB221004.1 and AK055770.1. On Nov 15, 2013 this sequence version replaced NM_001166271.1. Transcript Variant: This variant (1) encodes isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## CDS exon combination :: BX648244.1, SRR1803614.140528.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1968968 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGACCCAGG CTGCCGTGCG GCCCTGGGCA CCCTGCCTGG AGAACATGAC CACTGCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001159743.1 |
CDS | 329..4162 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCCAGG CTGCCGTGCG GCCCTGGGCA CCCTGCCTGG AGAACATGAC CACTGCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu14738 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286792.1 , NM_001286792.2 | |
Accession Version | NM_001286792.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4020bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL445985.10, HY002340.1, BX648244.1, AL359736.19 and AK055770.1. On Nov 15, 2013 this sequence version replaced XM_005266289.1. Transcript Variant: This variant (3) differs in the 5' UTR and contains multiple additional 5' coding exons, compared to variant 1. It represents use of an alternate promoter and initiates translation at an alternate start codon. The encoded isoform (3) has a longer N-terminus than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BX648244.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1970526, SAMEA2145743 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCAAAGC GTAGGCCTCA CAAACATCCT GGCCGTGAAG AGCTTGTCTT CAAGAGTAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273721.1 |
CDS | 467..4486 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCAAAGC GTAGGCCTCA CAAACATCCT GGCCGTGAAG AGCTTGTCTT CAAGAGTAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu14738 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286792.1 , NM_001286792.2 | |
Accession Version | NM_001286792.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4020bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 13 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HY002340.1, BX648244.1, AL359736.19 and AK055770.1. On May 31, 2019 this sequence version replaced NM_001286792.1. Transcript Variant: This variant (3) differs in the 5' UTR and contains multiple additional 5' coding exons, compared to variant 1. It represents use of an alternate promoter and initiates translation at an alternate start codon. The encoded isoform (3) has a longer N-terminus than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BX648244.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1970526, SAMEA2145743 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCAAAGC GTAGGCCTCA CAAACATCCT GGCCGTGAAG AGCTTGTCTT CAAGAGTAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273721.1 |
CDS | 291..4310 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGGCAAAGC GTAGGCCTCA CAAACATCCT GGCCGTGAAG AGCTTGTCTT CAAGAGTAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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