Gene Symbol | CSDE1 |
Entrez Gene ID | 7812 |
Full Name | cold shock domain containing E1 |
Synonyms | D1S155E,UNR |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » CSDE1 cDNA ORF clone
Gene Symbol | CSDE1 |
Entrez Gene ID | 7812 |
Full Name | cold shock domain containing E1 |
Synonyms | D1S155E,UNR |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_001007553.2 | NP_001007554.1 | cold shock domain-containing protein E1 isoform 1 |
NM_001242893.1 | NP_001229822.1 | cold shock domain-containing protein E1 isoform 2 |
NM_001242893.2 | NP_001229822.1 | cold shock domain-containing protein E1 isoform 2 |
NM_001130523.2 | NP_001123995.1 | cold shock domain-containing protein E1 isoform 3 |
NM_001242892.1 | NP_001229821.1 | cold shock domain-containing protein E1 isoform 1 |
NM_001007553.3 | NP_001007554.1 | cold shock domain-containing protein E1 isoform 1 |
NM_001242891.1 | NP_001229820.1 | cold shock domain-containing protein E1 isoform 4 |
NM_001242892.2 | NP_001229821.1 | cold shock domain-containing protein E1 isoform 1 |
NM_001130523.3 | NP_001123995.1 | cold shock domain-containing protein E1 isoform 3 |
NM_007158.5 | NP_009089.4 | cold shock domain-containing protein E1 isoform 2 |
NM_007158.6 | NP_009089.4 | cold shock domain-containing protein E1 isoform 2 |
Homo sapiens (human) | CSDE1 | NP_001229820.1 |
Canis lupus familiaris (dog) | CSDE1 | XP_533016.1 |
Bos taurus (cattle) | CSDE1 | NP_001091494.1 |
Rattus norvegicus (Norway rat) | Csde1 | NP_446458.1 |
Rattus norvegicus (Norway rat) | LOC100364335 | XP_003751901.1 |
Gallus gallus (chicken) | CSDE1 | NP_001026089.1 |
Danio rerio (zebrafish) | si:ch211-261n11.2 | NP_001186365.1 |
Drosophila melanogaster (fruit fly) | Unr | NP_001137912.1 |
CSDE1 | XP_001111655.1 | |
Danio rerio (zebrafish) | csde1 | XP_005167014.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004937 | XP_315026.4 |
Pan troglodytes (chimpanzee) | CSDE1 | XP_003949558.1 |
Mus musculus (house mouse) | Csde1 | NP_659150.1 |
Xenopus tropicalis (tropical clawed frog) | csde1 | NP_001025700.1 |
A post-transcriptional program coordinated by CSDE1 prevents intrinsic neural differentiation of human embryonic stem cells.
Ju Lee H, Bartsch D, Xiao C, Guerrero S, Ahuja G, Schindler C, Moresco JJ, Yates JR 3rd, Gebauer F, Bazzi H, Dieterich C, Kurian L, Vilchez D
Nature communications8(1)1456(2017 Nov)
UNR/CDSE1 expression as prognosis biomarker in resectable pancreatic ductal adenocarcinoma patients: A proof-of-concept.
Martinez-Useros J, Georgiev-Hristov T, Fern?ndez-Ace?ero MJ, Borrero-Palacios A, Indacochea A, Guerrero S, Li W, Cebri?n A, G?mez Del Pulgar T, Puime-Otin A, Del Puerto-Nevado L, Rodr?guez-Rem?rez M, P?rez N, Celdr?n A, Gebauer F, Garcia-Foncillas J
PloS one12(8)e0182044(2017)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
UNR/CDSE1 expression is correlated with outcome in patients with resectable pancreatic ductal adenocarcinoma
Title: UNR/CDSE1 expression as prognosis biomarker in resectable pancreatic ductal adenocarcinoma patients: A proof-of-concept.
Results identify UNR as an oncogenic modulator of melanoma progression, unraveling the underlying molecular mechanisms. UNR seems to regulate translation elongation of Vimentin and RAC1 mRNAs.
Title: UNR/CSDE1 Drives a Post-transcriptional Program to Promote Melanoma Invasion and Metastasis.
Studies indicate that Unr (upstream of N-ras) is post-translationally modified by phosphorylation and lysine acetylation.
Title: Regulation of the expression and activity of Unr in mammalian cells.
Hepsin suppressed CDK11p58 internal ribosome entry site activity in prostate cancer cells by modulating UNR expression and eIF-2alpha phosphorylation.
Title: Hepsin inhibits CDK11p58 IRES activity by suppressing unr expression and eIF-2? phosphorylation in prostate cancer.
Study suggests TRIM33 and NRAS-CSDE1 as candidate genes for autism, and may provide a novel insight into the etiology of autism
Title: Common genetic variants on 1p13.2 associate with risk of autism.
The following CSDE1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CSDE1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
Online Only Promotion
Up to 50% OFF! Starting
from $49/clone
CloneID | OHu12909 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242893.1 , NM_001242893.2 , NM_007158.5 , NM_007158.6 | |
Accession Version | NM_001242893.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2304bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-09 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, BC017662.1, AL096773.6, AB020692.1 and BU681634.1. Transcript Variant: This variant (6) differs in the 5' UTR and lacks two alternate coding exons compared to variant 4. The resulting isoform (2) is shorter at the N-terminus and lacks an internal segment compared to isoform 4. Variants 2 and 6 both encode isoform 2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803615.101920.1, SRR1803613.276469.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229822.1 |
CDS | 127..2430 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001242893.1 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12909 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242893.1 , NM_001242893.2 , NM_007158.5 , NM_007158.6 | |
Accession Version | NM_001242893.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2304bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-26 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, BC017662.1, AL096773.6, AB020692.1 and BU681634.1. On May 31, 2019 this sequence version replaced NM_001242893.1. Transcript Variant: This variant (6) differs in the 5' UTR and lacks two alternate coding exons compared to variant 4. The resulting isoform (2) is shorter at the N-terminus and lacks an internal segment compared to isoform 4. Variants 2 and 6 both encode isoform 2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7346977.1553805.1, SRR1803617.184214.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229822.1 |
CDS | 61..2364 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001242893.2 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12909 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242893.1 , NM_001242893.2 , NM_007158.5 , NM_007158.6 | |
Accession Version | NM_007158.5 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2304bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-09 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, BC032446.1, AB020692.1 and BU681634.1. On Jul 1, 2011 this sequence version replaced NM_007158.4. Transcript Variant: This variant (2) lacks two alternate coding exons compared to variant 4. The resulting isoform (2) is shorter at the N-terminus and lacks an internal segment compared to isoform 4. Variants 2 and 6 both encode isoform 2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803617.134367.1, SRR1660805.217032.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_009089.4 |
CDS | 514..2817 |
Translation |
Target ORF information:
Target ORF information:
|
NM_007158.5 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12909 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242893.1 , NM_001242893.2 , NM_007158.5 , NM_007158.6 | |
Accession Version | NM_007158.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2304bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-26 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, BC032446.1, AB020692.1 and BU681634.1. On May 31, 2019 this sequence version replaced NM_007158.5. Transcript Variant: This variant (2) lacks two alternate coding exons compared to variant 4. The resulting isoform (2) is shorter at the N-terminus and lacks an internal segment compared to isoform 4. Variants 2 and 6 both encode isoform 2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803617.36186.1, SRR1803616.262647.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_009089.4 |
CDS | 448..2751 |
Translation |
Target ORF information:
Target ORF information:
|
NM_007158.6 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu13820 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242891.1 | |
Accession Version | NM_001242891.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2535bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-26 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, AB020692.1, CR749431.1 and BU681634.1. Transcript Variant: This variant (4) represents the longest transcript and encodes the longest isoform (4). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803613.238174.1, SRR1660807.235455.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGAACG TTTTTACTGT GTCATCAGAT CCTCATCCCT CTCCTGCAGC CCCTCCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229820.1 |
CDS | 523..3057 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001242891.1 |
1 | ATGGAGAACG TTTTTACTGT GTCATCAGAT CCTCATCCCT CTCCTGCAGC CCCTCCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12668 | |
Clone ID Related Accession (Same CDS sequence) | NM_001007553.2 , NM_001242892.1 , NM_001007553.3 , NM_001242892.2 | |
Accession Version | NM_001007553.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-31 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, AB020692.1 and BU681634.1. On Jul 1, 2011 this sequence version replaced NM_001007553.1. Transcript Variant: This variant (1) differs in the 5' UTR and coding sequence compared to variant 4. The resulting isoform (1) is shorter at the N-terminus compared to isoform 4. Variants 1 and 5 both encode isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660803.196798.1, SRR1803617.171505.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001007554.1 |
CDS | 514..2910 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001007553.2 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12668 | |
Clone ID Related Accession (Same CDS sequence) | NM_001007553.2 , NM_001242892.1 , NM_001007553.3 , NM_001242892.2 | |
Accession Version | NM_001242892.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-09 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, AK290146.1, AL096773.6, AB020692.1 and BU681634.1. Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence compared to variant 4. The resulting isoform (1) is shorter at the N-terminus compared to isoform 4. Variants 1 and 5 both encode isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660803.214531.1, SRR1660803.222741.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229821.1 |
CDS | 127..2523 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001242892.1 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12668 | |
Clone ID Related Accession (Same CDS sequence) | NM_001007553.2 , NM_001242892.1 , NM_001007553.3 , NM_001242892.2 | |
Accession Version | NM_001007553.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-26 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, AB020692.1 and BU681634.1. On Nov 22, 2018 this sequence version replaced NM_001007553.2. Transcript Variant: This variant (1) differs in the 5' UTR and coding sequence compared to variant 4. The resulting isoform (1) is shorter at the N-terminus compared to isoform 4. Variants 1 and 5 both encode isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803614.247132.1, SRR1803613.114801.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000358528.9/ ENSP00000351329.4 RefSeq Select criteria :: based on conservation ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001007554.1 |
CDS | 448..2844 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001007553.3 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12668 | |
Clone ID Related Accession (Same CDS sequence) | NM_001007553.2 , NM_001242892.1 , NM_001007553.3 , NM_001242892.2 | |
Accession Version | NM_001242892.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-26 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, AK290146.1, AL096773.6, AB020692.1 and BU681634.1. On May 31, 2019 this sequence version replaced NM_001242892.1. Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence compared to variant 4. The resulting isoform (1) is shorter at the N-terminus compared to isoform 4. Variants 1 and 5 both encode isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660803.214531.1, SRR1660803.222741.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229821.1 |
CDS | 61..2457 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001242892.2 |
1 | ATGAGCTTTG ATCCAAACCT TCTCCACAAC AATGGACATA ATGGGTACCC TAATGGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu13818 | |
Clone ID Related Accession (Same CDS sequence) | NM_001130523.2 , NM_001130523.3 | |
Accession Version | NM_001130523.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2442bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-09 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, AB020692.1, CR749431.1 and BU681634.1. On Jul 1, 2011 this sequence version replaced NM_001130523.1. Transcript Variant: This variant (3) lacks an alternate in-frame exon compared to variant 4. The resulting isoform (3) has the same N- and C-termini but lacks an internal segment compared to isoform 4. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: CR749431.1, SRR1803611.226731.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGAGAACG TTTTTACTGT GTCATCAGAT CCTCATCCCT CTCCTGCAGC CCCTCCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123995.1 |
CDS | 523..2964 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001130523.2 |
1 | ATGGAGAACG TTTTTACTGT GTCATCAGAT CCTCATCCCT CTCCTGCAGC CCCTCCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu13818 | |
Clone ID Related Accession (Same CDS sequence) | NM_001130523.2 , NM_001130523.3 | |
Accession Version | NM_001130523.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2442bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-26 | |
Organism | Homo sapiens(human) | |
Product | cold shock domain-containing protein E1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP202324.1, AB020692.1, CR749431.1 and BU681634.1. On May 31, 2019 this sequence version replaced NM_001130523.2. Transcript Variant: This variant (3) lacks an alternate in-frame exon compared to variant 4. The resulting isoform (3) has the same N- and C-termini but lacks an internal segment compared to isoform 4. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660807.109086.1, CR749431.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGAGAACG TTTTTACTGT GTCATCAGAT CCTCATCCCT CTCCTGCAGC CCCTCCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123995.1 |
CDS | 457..2898 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001130523.3 |
1 | ATGGAGAACG TTTTTACTGT GTCATCAGAT CCTCATCCCT CTCCTGCAGC CCCTCCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A post-transcriptional program coordinated by CSDE1 prevents intrinsic neural differentiation of human embryonic stem cells. |
UNR/CDSE1 expression as prognosis biomarker in resectable pancreatic ductal adenocarcinoma patients: A proof-of-concept. |