LINJ_03_0050 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_03_0050
Entrez Gene ID	10966315
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392129.1	XP_003392177.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_03_0050 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_03_0050 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07615	XM_003392129.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_03_0050 ( XM_003392129.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392177.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07615
Clone ID Related Accession (Same CDS sequence)	XM_003392129.1
Accession Version	XM_003392129.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1173bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009388). COMPLETENESS: incomplete on both ends.

ATGCTGCCAG CAACGCTTCG TTTGCTGCTC AGTGTGTCTG TGGCGACTCT AGTGCTGTAC 
TACGTGCTCA AGCACTTCTC CGCCCCGAAG GGAGGTGCCA AGAAGCTGAA GCGGAGAAAG 
GACCCTGCAG AGCGCAAGCC TGTCAAGGGC GTCGCACCGC ATAAGATTGA TATCTTCACC 
ACCAACGTAT GCGCGGCCTT TCCGGAAATG TCGGTCGACG CCGCCCGGCG TCTCTTTCCA 
CGCAAGTTCG AGGTGCACGG TCACGTCGTG GTGATTCGCC TGAATGATGG CACCTCGGTA 
GAGGAGCTCC GCCCGCTGGC ACGCTTTTTT GCCGAGTCCT TTGCACCGGT TTTGGTGCAT 
GTGGTACTGC TGGACGTGGA CGGCATCGTT GGCGAGCTCC GCCGCCCATC TCTGCAGATC 
CTGTTCCAGG CAGACACCGC CTTGACGAAA TGTGCGACGT CGCTGCGACG CACCGTGCAA 
CGCCGCTGGG GAGATGCGCG GAAGCGAGGC CAAACGTCGT GTATGACAAT TGATGCTATG 
GAGAGCACAC TGAATCGGTG GACGGCCTCA CCAACCTTCA CGGCACACGT GGAGAACGGT 
GTCATTTACA GCTTCGACGT GTCGCGGGTG ATGTTTAGCA GCGGCAACAC GACGGAGCGA 
ATGCACTTTG GGACCGTCAC TGCTGCTGAT GAGGTCGTGG TAGACATGTT TTGCGGCATC 
GGCTACTTCA CCCTTCCATT AGCGATGCAT GGCAACGTTG CAGCTATTCA CGCTCTTGAG 
AAGAACCCGG ATAGCATCGA CTTTTTGAAG CTAAATGCCG TGCTGAACAA GGTGGACCAC 
CTCATTCGCC CCGTGTGCGG TGACAACCGC GAGGTGGGAG AGGAGTTGCT GGGCAAGTGC 
GACCGTGTTT TGATGGGCTA CATTCCTACG TGCAAGTCGT TTCTCCCGCG TGCTCTGTCG 
TTCCTCAAGC GCAACGAGGC AGGGCGGAGT AGCGGCGTCG TGCACTACCA CTTGCTTGCC 
GACAAGCTCA GCGCTGCGCA GGAGGCGCTG AGGGACGTCC AAGATGAGCT GGGGGAGGAG 
GTCGCCGCGT TCGTCCGCAT TACTGATCTT CGATGTGTGA AGTCGTACGC TCCGAAACGC 
TTCCACTTTG TTGCTGATCT CGTTTTCGAG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392177.1
CDS	1..1173
Translation	MLPATLRLLLSVSVATLVLYYVLKHFSAPKGGAKKLKRRKDPAERKPVKGVAPHKIDIFTTNVCAAFPEMSVDAARRLFPRKFEVHGHVVVIRLNDGTSVEELRPLARFFAESFAPVLVHVVLLDVDGIVGELRRPSLQILFQADTALTKCATSLRRTVQRRWGDARKRGQTSCMTIDAMESTLNRWTASPTFTAHVENGVIYSFDVSRVMFSSGNTTERMHFGTVTAADEVVVDMFCGIGYFTLPLAMHGNVAAIHALEKNPDSIDFLKLNAVLNKVDHLIRPVCGDNREVGEELLGKCDRVLMGYIPTCKSFLPRALSFLKRNEAGRSSGVVHYHLLADKLSAAQEALRDVQDELGEEVAAFVRITDLRCVKSYAPKRFHFVADLVFE

Target ORF information:

RefSeq Version	XM_003392129.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392129.1

ORF Insert Sequence:

ATGCTGCCAG CAACGCTTCG TTTGCTGCTC AGTGTGTCTG TGGCGACTCT AGTGCTGTAC 
TACGTGCTCA AGCACTTCTC CGCCCCGAAG GGAGGTGCCA AGAAGCTGAA GCGGAGAAAG 
GACCCTGCAG AGCGCAAGCC TGTCAAGGGC GTCGCACCGC ATAAGATTGA TATCTTCACC 
ACCAACGTAT GCGCGGCCTT TCCGGAAATG TCGGTCGACG CCGCCCGGCG TCTCTTTCCA 
CGCAAGTTCG AGGTGCACGG TCACGTCGTG GTGATTCGCC TGAATGATGG CACCTCGGTA 
GAGGAGCTCC GCCCGCTGGC ACGCTTTTTT GCCGAGTCCT TTGCACCGGT TTTGGTGCAT 
GTGGTACTGC TGGACGTGGA CGGCATCGTT GGCGAGCTCC GCCGCCCATC TCTGCAGATC 
CTGTTCCAGG CAGACACCGC CTTGACGAAA TGTGCGACGT CGCTGCGACG CACCGTGCAA 
CGCCGCTGGG GAGATGCGCG GAAGCGAGGC CAAACGTCGT GTATGACAAT TGATGCTATG 
GAGAGCACAC TGAATCGGTG GACGGCCTCA CCAACCTTCA CGGCACACGT GGAGAACGGT 
GTCATTTACA GCTTCGACGT GTCGCGGGTG ATGTTTAGCA GCGGCAACAC GACGGAGCGA 
ATGCACTTTG GGACCGTCAC TGCTGCTGAT GAGGTCGTGG TAGACATGTT TTGCGGCATC 
GGCTACTTCA CCCTTCCATT AGCGATGCAT GGCAACGTTG CAGCTATTCA CGCTCTTGAG 
AAGAACCCGG ATAGCATCGA CTTTTTGAAG CTAAATGCCG TGCTGAACAA GGTGGACCAC 
CTCATTCGCC CCGTGTGCGG TGACAACCGC GAGGTGGGAG AGGAGTTGCT GGGCAAGTGC 
GACCGTGTTT TGATGGGCTA CATTCCTACG TGCAAGTCGT TTCTCCCGCG TGCTCTGTCG 
TTCCTCAAGC GCAACGAGGC AGGGCGGAGT AGCGGCGTCG TGCACTACCA CTTGCTTGCC 
GACAAGCTCA GCGCTGCGCA GGAGGCGCTG AGGGACGTCC AAGATGAGCT GGGGGAGGAG 
GTCGCCGCGT TCGTCCGCAT TACTGATCTT CGATGTGTGA AGTCGTACGC TCCGAAACGC 
TTCCACTTTG TTGCTGATCT CGTTTTCGAG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_03_0050 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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