LINJ_25_1310 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_25_1310
Entrez Gene ID	5069598
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466126.2	XP_001466163.2	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_25_1310 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_25_1310 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc03228	XM_001466126.2 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_25_1310 ( XM_001466126.2 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466163.2 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc03228
Clone ID Related Accession (Same CDS sequence)	XM_001466126.2
Accession Version	XM_001466126.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3201bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009409). On Jul 14, 2011 this sequence version replaced XM_001466126.1. COMPLETENESS: incomplete on both ends.

ATGACGATGT TCCCCCGCCC CCCTTTGCCT TCCTTTCAGG TGACGCTGCT GCCCGAGCCG 
CCGCCGGTGC GGCAGCAGCA GGCACCGGGT AAGGCACACT CCGCGTCGTC CCCACCATCG 
CCGTCATGCT CCTCACGCGC ATCCATACAG ATGCAAGATG AGGCCGCCGC CAAGGCCATG 
CTGCACGCTG TCCTTGACAT GGCGTACGAC TGCACGATGC CGCAGCGGCG CTTTTGCAGC 
TACTCGCCCG AGGCGGTGCT GCGCAGCGTG CGAGCCCTTG TGGACAGCGA TCTCTGCGCT 
CCCCTGGTGG AGTCGCTGCA AGCCGCCGCG CGGGCGTATG CACAGCGCTG CGTGGAGGTG 
CTGATGGCGC AGCAGCAGCA GCTGCCGCCC GGCGCTGGCA CCCCGGAAGG AATGGCAAAC 
GACGACACAG AGAGCGACGA GGAGGCCACG GCGCTGTCGG CGAACGCGAC GCTGGGCGTG 
GTTCAAATTC TGGCACAGCT TGTCACCTAC TGGGAGCGAC TGCAGCAGGG CCTGGCGGAG 
CTGTCGTCTG TGTGGGTCTA CGCAGACCAG TGGTGCTCGA TGCAAGTCGG CAGCGCCATG 
CCGCGTTCCC TGATCGCTGC CGCCACGCAA GAGATTCGTG AGGTTTTCAG CGGCTACCCG 
GAGCTCTGTG ACACAGCACT AGCAGGATAC GTGGCCGTGC TAAAGGCGGA GCTGACGGCC 
GATACGGCGG CGCTTCTCTC AGCGTCCCGC TCTGCGCGCA TGTCTTATGC GGCGGCGCTG 
CCGGACAAGC GTGCAGCAGC TTCTCTTGCG GACTCAGAGC AGTCGGTAGC TTCCGCGCCG 
CCGCTCCCGA GCGCGGATGC GACTCCGCTC GCTGCACTAG CGTGCCCGCC TTCTCTCGCC 
TCCCTCGACA AACCGCTCCG GCAGCGTCTG CTACGCCTCT TCACTCAGCT CACCCTCGCC 
ACTCAGCAAT ACACAACGCG AGTGGAGCCG ACAGTGGTGC GCGTTGTGCG AGGCCACTAC 
GAGGAGGTTG CGCACCGCTT ATGGGCTGAG AACGTCAACG CAAGAGTATT TTTCCGTTTT 
TGCGACTTCG TTCTTAGGCA TGTCGGGCCG ATGTCGGCAT CCCTGCTTCA CCCCGGGACA 
TCACTGATGC TGGAGGAGGC GATTCAAGGG TCGCTGATCA GCACGGTGGG TAGCGAGGTG 
CTCAAGCGCG ATTTCGTTGC CCTCATGGAG CGGCAGGAGT ACCGCTCGCT GCGTTTGGCG 
TGGCGGCTGC TCTCTGTCAG TGCGCGGGTG CGCAGCTCTC CGCTTGTCGC CGATTTATTT 
CACGAGTACC TGATGGACTG CGGCCAACGA ATCATGGAGG AGCTGGTGCC GTCGTCGACC 
AAGGGCACAC CCGCTGCGGC TCTGGTGCCT CCGTGCGAGC GGCCGTTCCT GGCAGTACGG 
CACCTACTTG GTCTGCTGGA GCAAGGCAGC CGCACCGTAG CGAAGTGCTT TTCGGAGTGC 
GAGAGGGATT TCAAAGTGGC GCTGCACGAG GACCTGCAGA CAATCCTTGA GGCCTACCCA 
CAGGCCTTCT CGGAGCAGCT TGCCGCCTAC CAGGATGCGA TTATGAGGGA GGTCGAGGTG 
GGGCACGTGC CGGTTGGCTC TTCAAAACCG ACGCCGCCGG TGGCGCTAGA GAAGAACGGA 
GATGACGACA ACGATGACGA GGAGGACGTG TCGTCGTCGC CGCTGCGCCG GCCACGCCCC 
GAGGGGACTT CGCCGTCGTC GCGGCCTCCC GTTGCGGCAC CTTCACCCGA CCTCACACGG 
GCTGAGGAGG ACGAAGGTGC TTCGTCGGGG AGGGAGGAGC CGACGGAGGT GGAGGACGCG 
GCGGAGGGCG ACGCCGTGAT GGGTGCGGCC GCACTGCATC ACGCCGCGCC GCTTCCGACG 
GGAGTGAGGG AAGCGACGTC GGTGCTGCGC CGCATCGCGC ACATCTACTC CTACCACCCC 
AAAAAGGACC TGTTCGAGGC GGCCTACTGG CGCGACTTTG CCAGGCGCTG CCTGCATGCA 
CACCGCAAGC TGAACAGCAC CGCTGAAAAC ACATTTATTG GCTTCCTGCG CGACATTTGC 
GGCCTCTCCT TCACCTCCAA GTTTGAGGGT ATGCTGACTG ATCTGACCTC GTCGACGGAG 
CTGACGACAC AGTACAACAC GTGGGTACAG GAGCAGGAGC GGTCGCTGCA GCAGCAGCAG 
CAGCAGCCGT CCGGCGAGGA AGGCGCTGAA ACCTCGGCGG TGGGTCGACT CGTGCCGGAG 
GCGAAGAGCC TTGATGCGCA CCTCTTCATC CTGACGCAGA GCTACTGGCC CGAATGCCCG 
TCAATGCCCA GCAACTTTTA CGTACCACCT GCCGTGCGGG CCATCACGCA ACTAGTGGAG 
AAGTTCTACA CCGGCCGGTT CCCGAACCGC CACCTCAGCT GGCAGCACCC CCTGAGCCAC 
GCGACCCTGG TCGTGCGGCT CACACCGCAG AGCTCCACGC TGACGCTCAC CGGCACGTAC 
ACGCAGTGCG TGCTGCTCAT GCAGCTGGAC GCGCTCTACG ACCGCGGTGT CACCTCCATC 
ACAGCCAAGG CACTGTGCGA CGCTGTGGGG ATGGATATAG CCAACACAGA GCTCCTGGGG 
TCGCTGCAAG GACTTTGCCA TCCGCGATTC CGCCTTGTCC TGCGCGCGGA GGCCGCCTCG 
TCGCCGCCTT CCGGCGATGG GGCGCAGCGC ACGTCTGCGG AGCTTGACAA CGAGGACGAC 
GAGAGCGCTG CGAGGGTCGA GGAAGCGGCC GCGTCATGTG CGTCACCGCA GTCCTCCTCG 
CCAGGCACCG CCGCGGGTGC ATCCGCCGGC TGCACGTTAG CTGCCACAGA CTTGCTGCAG 
CTGAACCTGG GCTTCACGTC TGCCACGAGC AAGGTGCGCA TTCCCTTTCA GACGCGCATG 
CGCACCACGG CGTCTGCCGG CCTCGACGGC CCCAGCCGCG GCGGACGCAC CGCCGACAAT 
GGCGGCCATC TGGTGGAGGT GGCCATCGTG AGTTGCCTTA AGGCGCAACG CACCATGACG 
CGCATAGACT TGGCGAGCGC CGTAGCAGCG CGGGTGCCGT TTCCGGTGAC AACGGCAGTG 
TTAAAGAAGG CGATTGACAA GATGATCGAG CGCGGCTTTA TGGTACGGGG TAAGGACAAC 
GCATACGTCT ACTCGGCATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466163.2
CDS	1..3201
Translation	MTMFPRPPLPSFQVTLLPEPPPVRQQQAPGKAHSASSPPSPSCSSRASIQMQDEAAAKAMLHAVLDMAYDCTMPQRRFCSYSPEAVLRSVRALVDSDLCAPLVESLQAAARAYAQRCVEVLMAQQQQLPPGAGTPEGMANDDTESDEEATALSANATLGVVQILAQLVTYWERLQQGLAELSSVWVYADQWCSMQVGSAMPRSLIAAATQEIREVFSGYPELCDTALAGYVAVLKAELTADTAALLSASRSARMSYAAALPDKRAAASLADSEQSVASAPPLPSADATPLAALACPPSLASLDKPLRQRLLRLFTQLTLATQQYTTRVEPTVVRVVRGHYEEVAHRLWAENVNARVFFRFCDFVLRHVGPMSASLLHPGTSLMLEEAIQGSLISTVGSEVLKRDFVALMERQEYRSLRLAWRLLSVSARVRSSPLVADLFHEYLMDCGQRIMEELVPSSTKGTPAAALVPPCERPFLAVRHLLGLLEQGSRTVAKCFSECERDFKVALHEDLQTILEAYPQAFSEQLAAYQDAIMREVEVGHVPVGSSKPTPPVALEKNGDDDNDDEEDVSSSPLRRPRPEGTSPSSRPPVAAPSPDLTRAEEDEGASSGREEPTEVEDAAEGDAVMGAAALHHAAPLPTGVREATSVLRRIAHIYSYHPKKDLFEAAYWRDFARRCLHAHRKLNSTAENTFIGFLRDICGLSFTSKFEGMLTDLTSSTELTTQYNTWVQEQERSLQQQQQQPSGEEGAETSAVGRLVPEAKSLDAHLFILTQSYWPECPSMPSNFYVPPAVRAITQLVEKFYTGRFPNRHLSWQHPLSHATLVVRLTPQSSTLTLTGTYTQCVLLMQLDALYDRGVTSITAKALCDAVGMDIANTELLGSLQGLCHPRFRLVLRAEAASSPPSGDGAQRTSAELDNEDDESAARVEEAAASCASPQSSSPGTAAGASAGCTLAATDLLQLNLGFTSATSKVRIPFQTRMRTTASAGLDGPSRGGRTADNGGHLVEVAIVSCLKAQRTMTRIDLASAVAARVPFPVTTAVLKKAIDKMIERGFMVRGKDNAYVYSA

Target ORF information:

RefSeq Version	XM_001466126.2
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466126.2

ORF Insert Sequence:

ATGACGATGT TCCCCCGCCC CCCTTTGCCT TCCTTTCAGG TGACGCTGCT GCCCGAGCCG 
CCGCCGGTGC GGCAGCAGCA GGCACCGGGT AAGGCACACT CCGCGTCGTC CCCACCATCG 
CCGTCATGCT CCTCACGCGC ATCCATACAG ATGCAAGATG AGGCCGCCGC CAAGGCCATG 
CTGCACGCTG TCCTTGACAT GGCGTACGAC TGCACGATGC CGCAGCGGCG CTTTTGCAGC 
TACTCGCCCG AGGCGGTGCT GCGCAGCGTG CGAGCCCTTG TGGACAGCGA TCTCTGCGCT 
CCCCTGGTGG AGTCGCTGCA AGCCGCCGCG CGGGCGTATG CACAGCGCTG CGTGGAGGTG 
CTGATGGCGC AGCAGCAGCA GCTGCCGCCC GGCGCTGGCA CCCCGGAAGG AATGGCAAAC 
GACGACACAG AGAGCGACGA GGAGGCCACG GCGCTGTCGG CGAACGCGAC GCTGGGCGTG 
GTTCAAATTC TGGCACAGCT TGTCACCTAC TGGGAGCGAC TGCAGCAGGG CCTGGCGGAG 
CTGTCGTCTG TGTGGGTCTA CGCAGACCAG TGGTGCTCGA TGCAAGTCGG CAGCGCCATG 
CCGCGTTCCC TGATCGCTGC CGCCACGCAA GAGATTCGTG AGGTTTTCAG CGGCTACCCG 
GAGCTCTGTG ACACAGCACT AGCAGGATAC GTGGCCGTGC TAAAGGCGGA GCTGACGGCC 
GATACGGCGG CGCTTCTCTC AGCGTCCCGC TCTGCGCGCA TGTCTTATGC GGCGGCGCTG 
CCGGACAAGC GTGCAGCAGC TTCTCTTGCG GACTCAGAGC AGTCGGTAGC TTCCGCGCCG 
CCGCTCCCGA GCGCGGATGC GACTCCGCTC GCTGCACTAG CGTGCCCGCC TTCTCTCGCC 
TCCCTCGACA AACCGCTCCG GCAGCGTCTG CTACGCCTCT TCACTCAGCT CACCCTCGCC 
ACTCAGCAAT ACACAACGCG AGTGGAGCCG ACAGTGGTGC GCGTTGTGCG AGGCCACTAC 
GAGGAGGTTG CGCACCGCTT ATGGGCTGAG AACGTCAACG CAAGAGTATT TTTCCGTTTT 
TGCGACTTCG TTCTTAGGCA TGTCGGGCCG ATGTCGGCAT CCCTGCTTCA CCCCGGGACA 
TCACTGATGC TGGAGGAGGC GATTCAAGGG TCGCTGATCA GCACGGTGGG TAGCGAGGTG 
CTCAAGCGCG ATTTCGTTGC CCTCATGGAG CGGCAGGAGT ACCGCTCGCT GCGTTTGGCG 
TGGCGGCTGC TCTCTGTCAG TGCGCGGGTG CGCAGCTCTC CGCTTGTCGC CGATTTATTT 
CACGAGTACC TGATGGACTG CGGCCAACGA ATCATGGAGG AGCTGGTGCC GTCGTCGACC 
AAGGGCACAC CCGCTGCGGC TCTGGTGCCT CCGTGCGAGC GGCCGTTCCT GGCAGTACGG 
CACCTACTTG GTCTGCTGGA GCAAGGCAGC CGCACCGTAG CGAAGTGCTT TTCGGAGTGC 
GAGAGGGATT TCAAAGTGGC GCTGCACGAG GACCTGCAGA CAATCCTTGA GGCCTACCCA 
CAGGCCTTCT CGGAGCAGCT TGCCGCCTAC CAGGATGCGA TTATGAGGGA GGTCGAGGTG 
GGGCACGTGC CGGTTGGCTC TTCAAAACCG ACGCCGCCGG TGGCGCTAGA GAAGAACGGA 
GATGACGACA ACGATGACGA GGAGGACGTG TCGTCGTCGC CGCTGCGCCG GCCACGCCCC 
GAGGGGACTT CGCCGTCGTC GCGGCCTCCC GTTGCGGCAC CTTCACCCGA CCTCACACGG 
GCTGAGGAGG ACGAAGGTGC TTCGTCGGGG AGGGAGGAGC CGACGGAGGT GGAGGACGCG 
GCGGAGGGCG ACGCCGTGAT GGGTGCGGCC GCACTGCATC ACGCCGCGCC GCTTCCGACG 
GGAGTGAGGG AAGCGACGTC GGTGCTGCGC CGCATCGCGC ACATCTACTC CTACCACCCC 
AAAAAGGACC TGTTCGAGGC GGCCTACTGG CGCGACTTTG CCAGGCGCTG CCTGCATGCA 
CACCGCAAGC TGAACAGCAC CGCTGAAAAC ACATTTATTG GCTTCCTGCG CGACATTTGC 
GGCCTCTCCT TCACCTCCAA GTTTGAGGGT ATGCTGACTG ATCTGACCTC GTCGACGGAG 
CTGACGACAC AGTACAACAC GTGGGTACAG GAGCAGGAGC GGTCGCTGCA GCAGCAGCAG 
CAGCAGCCGT CCGGCGAGGA AGGCGCTGAA ACCTCGGCGG TGGGTCGACT CGTGCCGGAG 
GCGAAGAGCC TTGATGCGCA CCTCTTCATC CTGACGCAGA GCTACTGGCC CGAATGCCCG 
TCAATGCCCA GCAACTTTTA CGTACCACCT GCCGTGCGGG CCATCACGCA ACTAGTGGAG 
AAGTTCTACA CCGGCCGGTT CCCGAACCGC CACCTCAGCT GGCAGCACCC CCTGAGCCAC 
GCGACCCTGG TCGTGCGGCT CACACCGCAG AGCTCCACGC TGACGCTCAC CGGCACGTAC 
ACGCAGTGCG TGCTGCTCAT GCAGCTGGAC GCGCTCTACG ACCGCGGTGT CACCTCCATC 
ACAGCCAAGG CACTGTGCGA CGCTGTGGGG ATGGATATAG CCAACACAGA GCTCCTGGGG 
TCGCTGCAAG GACTTTGCCA TCCGCGATTC CGCCTTGTCC TGCGCGCGGA GGCCGCCTCG 
TCGCCGCCTT CCGGCGATGG GGCGCAGCGC ACGTCTGCGG AGCTTGACAA CGAGGACGAC 
GAGAGCGCTG CGAGGGTCGA GGAAGCGGCC GCGTCATGTG CGTCACCGCA GTCCTCCTCG 
CCAGGCACCG CCGCGGGTGC ATCCGCCGGC TGCACGTTAG CTGCCACAGA CTTGCTGCAG 
CTGAACCTGG GCTTCACGTC TGCCACGAGC AAGGTGCGCA TTCCCTTTCA GACGCGCATG 
CGCACCACGG CGTCTGCCGG CCTCGACGGC CCCAGCCGCG GCGGACGCAC CGCCGACAAT 
GGCGGCCATC TGGTGGAGGT GGCCATCGTG AGTTGCCTTA AGGCGCAACG CACCATGACG 
CGCATAGACT TGGCGAGCGC CGTAGCAGCG CGGGTGCCGT TTCCGGTGAC AACGGCAGTG 
TTAAAGAAGG CGATTGACAA GATGATCGAG CGCGGCTTTA TGGTACGGGG TAAGGACAAC 
GCATACGTCT ACTCGGCATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_25_1310 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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