LOC18107951 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18107951 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18107951 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa37283 XM_006370794.1
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0019s00950g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 12-14 $510.30
$729.00
OPa418660 XM_024591900.1
Latest version!
Populus trichocarpa TMV resistance protein N (LOC18107951), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa418659 XM_024591898.1
Latest version!
Populus trichocarpa TMV resistance protein N (LOC18107951), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa37283
    Clone ID Related Accession (Same CDS sequence) XM_006370794.1
    Accession Version XM_006370794.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2586bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008485). COMPLETENESS: incomplete on the 3' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGCCAGGAA TAGGTAAAAC AACAATAGCG AAAGCTGTAT TTAATCAACT ATGTCATGGA 
    TTTGAGGGAA GCTCTTTTAT TTCGAATGTC AAAGAAAAAA CAGTAGAGCA ATTACAAGAG
    CAGCTTCTTT GTGATATTTT GAAACCAAAT ACTTGGAAGA TCGATAATGT TTCTAAAGGA
    GTCAATTTGA TGAAAGATCG TTTTCGTAAC AAAAGAGTTC TTGTTGTTCT TGATGATTTT
    GATCAACTTA AACAACTAGA AGCATTGGTG AGAGAGAGAA ATTGTTTTGG TCCAGGAAGT
    AGAATAGTCA TTACAACGAG AGATGAACAT TTACTAACTC AAATTGAAGT GGATGGGAAA
    TATCATGTTA AGGAATTGCA TCAACATGAA TCCCTTCAGC TTTTTAGTTT GCACGCCTTT
    AAGGACACCC ATCCAGAGGA AGATTATGTG GAGCTATCGA ATGCTATAGT TGACTATGCT
    GGAGGGGTTC CCTTAGCTCT TGAAGTTTTA GGTTCTTATT TGTTCAGAAG AAACATATCT
    GTATGGAAAA GTGCTATTAA GAAACTACGG AAAATTCCAA ACAGACAAAT TCAGAAAACA
    CTTAGAATAA GTTTTGACAC CTTGGATGAT GACAAAGTGA AGGCCATGTT CCTCGATATT
    GCATGCTTTT TCATTGGTTG GGACAAAGAA TATGTAGTAG AAATACTCGA TGGTCGTGGC
    TTCTTTCCTG ATATCGGCAT TGATATTCTC ATCCAAAGGT CCCTCTTGTC AATTAATGAT
    GAAAATGAGT TAAACATGCA TGACCTCATA AGAGACATGG GCAGGGAGAT TGCTCGTGAA
    GTGTCATATG ACCATCCTGG AAAACGCAAC AGAATTTGGC TTCTTGAGGA TGCCTTAGAT
    GTCCTCAACA ACCAGACGGG AACAGATGCT GTGGAGGGTC TCGCACTAGA TGTTCGAGCA
    TCAACAGTTG CATCTCTTAG CACAAAATCA TTTACAAATA TGAGACGTTT GAAATTACTC
    CAAATCAATG GAGCACATCT TGCCGGAAGC TACAAGCTTC TACCGAATGA GTTGATATGG
    CTTTGTTGGC TTGAATGCCC TATGAAATCT TTGCCATCTG ATCTCCAGCT AAACAACCTG
    GTTGTTCTTG ATTTGCAGCA TAGTAACATC GAAGAACTTT GGAAGGGGAC TAAGATTCTC
    AATAAGCTTA AAATCCTCAA TCTTAGCTAT TCCAAGCTCC TTGTCAAAAC ACCAAACTTC
    CAAGGACTCC CTAGTTTGGA GATACTAAAA CTTACAGCTT GCACGAGTTT GGCCAAGGTA
    CATCCATCTA TTGGGCATTT AAAAAGGCTT GTTTCGTTGA ATTTGGAGGG ATGTTGCAGG
    CTAAAAACTC TTCCAGAAAG CATTTGCAAC TTGAAATCCA TTGAAACTCT AAATATTAGT
    TTGTGCTCAC AACTTGAGAA ATTGCCAGAA TTCTTGGGTG ATATGGAATC CTTAACTGAG
    TTCTGTTCTA CCTCCATAGC TATGCTACCA ACTCCTTTAA CTGGTTTGAC CTCATTGAAA
    GAACTAGATA TAAGTTATTG TGGTCTACAT GAAGCTTCAA GCTCCATTGA TATTGGGAGT
    TTGTCCTGTC TTGAAAAGCT GAATTTGTCA GGGAGCAAAT TCTCCAACCT GCCTTCTAGT
    ATTGGGCACC TTCTTAATCT TAAGGATTTG TGGGTTCGTA GATGCCCAAA TCTATTCCTA
    TCAACCTCAG AACTTCCATT AAGTTTGACG AGGTTGTATG CTTGTATTTG CTCGACAATG
    GAAAGAGTGC CAGTTCTGGG AGAAAAGAGA CTCTTAGTTA CTTCAGTTGG CTGCCTAAAT
    TTAATAGAGT TTCGGCACAT GGAACTTCTG GACACTAGCT CATCCATTCT GAACTTTGAT
    GACTGCAACG ATTTATCAAA TAATTATAAG GAAACTCTTG TTCAGGAATT GTTCAAAGGT
    GAAATGTGTG AGATTAGCTT TTCTGCCAGT GAGATACCAG AATGGTTCAG CCTTCGGGGA
    GAAGGATCTT CATTATCATT TCATTTACCT TCAGTTTTAG GTTCATATGG TAATCAACTC
    CAAGGGCTGC TTATTGGGGT TGTCTATGCC ACCTCTTTAG AAGGGTCATT TGCTCCGTGT
    AGAACTCTTT TAAGAAATAA GAGCAACGGT AAGGTAATGT TTGAAAGGTC CAGCAGCATC
    AAATTTGACC CAAGTTCCAC TAGGAATTCT TGGATTCTGA GTCTACCGTT GATTGGGGGG
    TATCGATGCG CAGTGAAAGG AGTGGAGGAA TTGGAGCTGA ATGTAGAAAT AAGCTCCAGT
    GGAGTTGAAC AGTGTGGGGT TCATCTGATA ACAAAAAATA ATGCTGTTTC AAATATTGGT
    AAGTTGGATC GTGACATTTA CAGCCTTGCT CGAACAGATA CAATGATAGT TCCATCTTAC
    CATCATCAAG CCGTAGCGTC TTCATCTCCT AATGAATGGT TGGAAAGTTG TTTAACAAGG
    GAGTTGCAAA GATGGAAAAT TTACTCCGCG ATTAAGGTTT CATTTGGTAT GGATTTTATA
    TATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006370856.1
    CDS117..2702
    Translation

    Target ORF information:

    RefSeq Version XM_006370794.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0019s00950g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006370794.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGCCAGGAA TAGGTAAAAC AACAATAGCG AAAGCTGTAT TTAATCAACT ATGTCATGGA 
    TTTGAGGGAA GCTCTTTTAT TTCGAATGTC AAAGAAAAAA CAGTAGAGCA ATTACAAGAG
    CAGCTTCTTT GTGATATTTT GAAACCAAAT ACTTGGAAGA TCGATAATGT TTCTAAAGGA
    GTCAATTTGA TGAAAGATCG TTTTCGTAAC AAAAGAGTTC TTGTTGTTCT TGATGATTTT
    GATCAACTTA AACAACTAGA AGCATTGGTG AGAGAGAGAA ATTGTTTTGG TCCAGGAAGT
    AGAATAGTCA TTACAACGAG AGATGAACAT TTACTAACTC AAATTGAAGT GGATGGGAAA
    TATCATGTTA AGGAATTGCA TCAACATGAA TCCCTTCAGC TTTTTAGTTT GCACGCCTTT
    AAGGACACCC ATCCAGAGGA AGATTATGTG GAGCTATCGA ATGCTATAGT TGACTATGCT
    GGAGGGGTTC CCTTAGCTCT TGAAGTTTTA GGTTCTTATT TGTTCAGAAG AAACATATCT
    GTATGGAAAA GTGCTATTAA GAAACTACGG AAAATTCCAA ACAGACAAAT TCAGAAAACA
    CTTAGAATAA GTTTTGACAC CTTGGATGAT GACAAAGTGA AGGCCATGTT CCTCGATATT
    GCATGCTTTT TCATTGGTTG GGACAAAGAA TATGTAGTAG AAATACTCGA TGGTCGTGGC
    TTCTTTCCTG ATATCGGCAT TGATATTCTC ATCCAAAGGT CCCTCTTGTC AATTAATGAT
    GAAAATGAGT TAAACATGCA TGACCTCATA AGAGACATGG GCAGGGAGAT TGCTCGTGAA
    GTGTCATATG ACCATCCTGG AAAACGCAAC AGAATTTGGC TTCTTGAGGA TGCCTTAGAT
    GTCCTCAACA ACCAGACGGG AACAGATGCT GTGGAGGGTC TCGCACTAGA TGTTCGAGCA
    TCAACAGTTG CATCTCTTAG CACAAAATCA TTTACAAATA TGAGACGTTT GAAATTACTC
    CAAATCAATG GAGCACATCT TGCCGGAAGC TACAAGCTTC TACCGAATGA GTTGATATGG
    CTTTGTTGGC TTGAATGCCC TATGAAATCT TTGCCATCTG ATCTCCAGCT AAACAACCTG
    GTTGTTCTTG ATTTGCAGCA TAGTAACATC GAAGAACTTT GGAAGGGGAC TAAGATTCTC
    AATAAGCTTA AAATCCTCAA TCTTAGCTAT TCCAAGCTCC TTGTCAAAAC ACCAAACTTC
    CAAGGACTCC CTAGTTTGGA GATACTAAAA CTTACAGCTT GCACGAGTTT GGCCAAGGTA
    CATCCATCTA TTGGGCATTT AAAAAGGCTT GTTTCGTTGA ATTTGGAGGG ATGTTGCAGG
    CTAAAAACTC TTCCAGAAAG CATTTGCAAC TTGAAATCCA TTGAAACTCT AAATATTAGT
    TTGTGCTCAC AACTTGAGAA ATTGCCAGAA TTCTTGGGTG ATATGGAATC CTTAACTGAG
    TTCTGTTCTA CCTCCATAGC TATGCTACCA ACTCCTTTAA CTGGTTTGAC CTCATTGAAA
    GAACTAGATA TAAGTTATTG TGGTCTACAT GAAGCTTCAA GCTCCATTGA TATTGGGAGT
    TTGTCCTGTC TTGAAAAGCT GAATTTGTCA GGGAGCAAAT TCTCCAACCT GCCTTCTAGT
    ATTGGGCACC TTCTTAATCT TAAGGATTTG TGGGTTCGTA GATGCCCAAA TCTATTCCTA
    TCAACCTCAG AACTTCCATT AAGTTTGACG AGGTTGTATG CTTGTATTTG CTCGACAATG
    GAAAGAGTGC CAGTTCTGGG AGAAAAGAGA CTCTTAGTTA CTTCAGTTGG CTGCCTAAAT
    TTAATAGAGT TTCGGCACAT GGAACTTCTG GACACTAGCT CATCCATTCT GAACTTTGAT
    GACTGCAACG ATTTATCAAA TAATTATAAG GAAACTCTTG TTCAGGAATT GTTCAAAGGT
    GAAATGTGTG AGATTAGCTT TTCTGCCAGT GAGATACCAG AATGGTTCAG CCTTCGGGGA
    GAAGGATCTT CATTATCATT TCATTTACCT TCAGTTTTAG GTTCATATGG TAATCAACTC
    CAAGGGCTGC TTATTGGGGT TGTCTATGCC ACCTCTTTAG AAGGGTCATT TGCTCCGTGT
    AGAACTCTTT TAAGAAATAA GAGCAACGGT AAGGTAATGT TTGAAAGGTC CAGCAGCATC
    AAATTTGACC CAAGTTCCAC TAGGAATTCT TGGATTCTGA GTCTACCGTT GATTGGGGGG
    TATCGATGCG CAGTGAAAGG AGTGGAGGAA TTGGAGCTGA ATGTAGAAAT AAGCTCCAGT
    GGAGTTGAAC AGTGTGGGGT TCATCTGATA ACAAAAAATA ATGCTGTTTC AAATATTGGT
    AAGTTGGATC GTGACATTTA CAGCCTTGCT CGAACAGATA CAATGATAGT TCCATCTTAC
    CATCATCAAG CCGTAGCGTC TTCATCTCCT AATGAATGGT TGGAAAGTTG TTTAACAAGG
    GAGTTGCAAA GATGGAAAAT TTACTCCGCG ATTAAGGTTT CATTTGGTAT GGATTTTATA
    TATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa418660
    Clone ID Related Accession (Same CDS sequence) XM_024591900.1
    Accession Version XM_024591900.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2028bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product TMV resistance protein N isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020167869.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGGCTTCTG TATCCTTTGA GTCCCATTCC TCTTCTTCAT CCTCTTCTAG ACATGGATCG 
    ACCTACGATG TCTTTTTGAG TTTTAGAGGA GCAGATACTC GCAACAATTT TACAGATCAT
    CTTTATGCTG CCTTAGACCA AGCAGGTATC TATACGTTTC GGGACGGTAA TGAACTTCCT
    CCAGGACAGG AAATCTCCTC ACAACTCAGT AGGGCAATCC GAGAATCAAG GATTTCTGTA
    GTGGTTTTCT CCAAAGGCTA TGCTTCTTCT AGATGGTGTC TTGACGAACT CGTAAAGATT
    CTTGAGTGTA GGCATGCCAT GGGGCAGCTT CTTGTTCCTA TATTCTATGA TATCGATCCG
    TCATATGTGC GAAAACAGAA ATGGAATGTT GGTGAAGCTC TTAAGAGAAA AGAAGAAGAC
    TTTGAGATTG AAATGGAGAG GTTGAAAAGG TGGAGAGAAG CTCTTGATGA GGCTGGAAAT
    ATATCTGGAT GGATTCTGAA GGATATGGCA AACGGGTATG AATCGAAATT TATTCAAAAG
    ATTGTTGAAG ATTTGTTGCA TAAATTAGGT CCCAAATGCT TAGACGTTGC CAAGTATCCT
    GTAGGTATTG AGTCTCGTGT TGATTATATT ATTGACCTGC TAAGCATCCA CTCAAATGAT
    GTTCGAGTTG TGGGTGTGTA TGGGATGCCA GGAATAGGTA AAACAACAAT AGCGAAAGCT
    GTATTTAATC AACTATGTCA TGGATTTGAG GGAAGCTCTT TTATTTCGAA TGTCAAAGAA
    AAAACAGTAG AGCAATTACA AGAGCAGCTT CTTTGTGATA TTTTGAAACC AAATACTTGG
    AAGATCGATA ATGTTTCTAA AGGAGTCAAT TTGATGAAAG ATCGTTTTCG TAACAAAAGA
    GTTCTTGTTG TTCTTGATGA TTTTGATCAA CTTAAACAAC TAGAAGCATT GGTGAGAGAG
    AGAAATTGTT TTGGTCCAGG AAGTAGAATA GTCATTACAA CGAGAGATGA ACATTTACTA
    ACTCAAATTG AAGTGGATGG GAAATATCAT GTTAAGGAAT TGCATCAACA TGAATCCCTT
    CAGCTTTTTA GTTTGCACGC CTTTAAGGAC ACCCATCCAG AGGAAGATTA TGTGGAGCTA
    TCGAATGCTA TAGTTGACTA TGCTGGAGGG GTTCCCTTAG CTCTTGAAGT TTTAGGTTCT
    TATTTGTTCA GAAGAAACAT ATCTGTATGG AAAAGTGCTA TTAAGAAACT ACGGAAAATT
    CCAAACAGAC AAATTCAGAA AACACTTAGA ATAAGTTTTG ACACCTTGGA TGATGACAAA
    GTGAAGGCCA TGTTCCTCGA TATTGCATGC TTTTTCATTG GTTGGGACAA AGAATATGTA
    GTAGAAATAC TCGATGGTCG TGGCTTCTTT CCTGATATCG GCATTGATAT TCTCATCCAA
    AGGTCCCTCT TGTCAATTAA TGATGAAAAT GAGTTAAACA TGCATGACCT CATAAGAGAC
    ATGGGCAGGG AGATTGCTCG TGAAGTGTCA TATGACCATC CTGGAAAACG CAACAGAATT
    TGGCTTCTTG AGGATGCCTT AGATGTCCTC AACAACCAGA CGGGAACAGA TGCTGTGGAG
    GGTCTCGCAC TAGATGTTCG AGCATCAACA GTTGCATCTC TTAGCACAAA ATCATTTACA
    AATATGAGAC GTTTGAAATT ACTCCAAATC AATGGAGCAC ATCTTGCCGG AAGCTACAAG
    CTTCTACCGA ATGAGTTGAT ATGGCTTTGT TGGCTTGAAT GCCCTATGAA ATCTTTGCCA
    TCTGATCTCC AGCTAAACAA CCTGGTTGTT CTTGATTTGC AGCATAGTAA CATCGAAGAA
    CTTTGGAAGG GGACTAAGAT TCTCAATAAG CTTAAAATCC TCAATCTTAG CTATTCCAAG
    CTCCTTGTCA AAACACCAAA CTTCCAAGGA CTCCCTAGTT TGGAGATACT AAAACTTACA
    GCTTGCACGA GTTTGGCCAA GAATTCTTGG GTGATATGGA ATCCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447668.1
    CDS216..2243
    Translation

    Target ORF information:

    RefSeq Version XM_024591900.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa TMV resistance protein N (LOC18107951), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024591900.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGGCTTCTG TATCCTTTGA GTCCCATTCC TCTTCTTCAT CCTCTTCTAG ACATGGATCG 
    ACCTACGATG TCTTTTTGAG TTTTAGAGGA GCAGATACTC GCAACAATTT TACAGATCAT
    CTTTATGCTG CCTTAGACCA AGCAGGTATC TATACGTTTC GGGACGGTAA TGAACTTCCT
    CCAGGACAGG AAATCTCCTC ACAACTCAGT AGGGCAATCC GAGAATCAAG GATTTCTGTA
    GTGGTTTTCT CCAAAGGCTA TGCTTCTTCT AGATGGTGTC TTGACGAACT CGTAAAGATT
    CTTGAGTGTA GGCATGCCAT GGGGCAGCTT CTTGTTCCTA TATTCTATGA TATCGATCCG
    TCATATGTGC GAAAACAGAA ATGGAATGTT GGTGAAGCTC TTAAGAGAAA AGAAGAAGAC
    TTTGAGATTG AAATGGAGAG GTTGAAAAGG TGGAGAGAAG CTCTTGATGA GGCTGGAAAT
    ATATCTGGAT GGATTCTGAA GGATATGGCA AACGGGTATG AATCGAAATT TATTCAAAAG
    ATTGTTGAAG ATTTGTTGCA TAAATTAGGT CCCAAATGCT TAGACGTTGC CAAGTATCCT
    GTAGGTATTG AGTCTCGTGT TGATTATATT ATTGACCTGC TAAGCATCCA CTCAAATGAT
    GTTCGAGTTG TGGGTGTGTA TGGGATGCCA GGAATAGGTA AAACAACAAT AGCGAAAGCT
    GTATTTAATC AACTATGTCA TGGATTTGAG GGAAGCTCTT TTATTTCGAA TGTCAAAGAA
    AAAACAGTAG AGCAATTACA AGAGCAGCTT CTTTGTGATA TTTTGAAACC AAATACTTGG
    AAGATCGATA ATGTTTCTAA AGGAGTCAAT TTGATGAAAG ATCGTTTTCG TAACAAAAGA
    GTTCTTGTTG TTCTTGATGA TTTTGATCAA CTTAAACAAC TAGAAGCATT GGTGAGAGAG
    AGAAATTGTT TTGGTCCAGG AAGTAGAATA GTCATTACAA CGAGAGATGA ACATTTACTA
    ACTCAAATTG AAGTGGATGG GAAATATCAT GTTAAGGAAT TGCATCAACA TGAATCCCTT
    CAGCTTTTTA GTTTGCACGC CTTTAAGGAC ACCCATCCAG AGGAAGATTA TGTGGAGCTA
    TCGAATGCTA TAGTTGACTA TGCTGGAGGG GTTCCCTTAG CTCTTGAAGT TTTAGGTTCT
    TATTTGTTCA GAAGAAACAT ATCTGTATGG AAAAGTGCTA TTAAGAAACT ACGGAAAATT
    CCAAACAGAC AAATTCAGAA AACACTTAGA ATAAGTTTTG ACACCTTGGA TGATGACAAA
    GTGAAGGCCA TGTTCCTCGA TATTGCATGC TTTTTCATTG GTTGGGACAA AGAATATGTA
    GTAGAAATAC TCGATGGTCG TGGCTTCTTT CCTGATATCG GCATTGATAT TCTCATCCAA
    AGGTCCCTCT TGTCAATTAA TGATGAAAAT GAGTTAAACA TGCATGACCT CATAAGAGAC
    ATGGGCAGGG AGATTGCTCG TGAAGTGTCA TATGACCATC CTGGAAAACG CAACAGAATT
    TGGCTTCTTG AGGATGCCTT AGATGTCCTC AACAACCAGA CGGGAACAGA TGCTGTGGAG
    GGTCTCGCAC TAGATGTTCG AGCATCAACA GTTGCATCTC TTAGCACAAA ATCATTTACA
    AATATGAGAC GTTTGAAATT ACTCCAAATC AATGGAGCAC ATCTTGCCGG AAGCTACAAG
    CTTCTACCGA ATGAGTTGAT ATGGCTTTGT TGGCTTGAAT GCCCTATGAA ATCTTTGCCA
    TCTGATCTCC AGCTAAACAA CCTGGTTGTT CTTGATTTGC AGCATAGTAA CATCGAAGAA
    CTTTGGAAGG GGACTAAGAT TCTCAATAAG CTTAAAATCC TCAATCTTAG CTATTCCAAG
    CTCCTTGTCA AAACACCAAA CTTCCAAGGA CTCCCTAGTT TGGAGATACT AAAACTTACA
    GCTTGCACGA GTTTGGCCAA GAATTCTTGG GTGATATGGA ATCCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa418659
    Clone ID Related Accession (Same CDS sequence) XM_024591898.1
    Accession Version XM_024591898.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3423bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product TMV resistance protein N isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020167869.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGGCTTCTG TATCCTTTGA GTCCCATTCC TCTTCTTCAT CCTCTTCTAG ACATGGATCG 
    ACCTACGATG TCTTTTTGAG TTTTAGAGGA GCAGATACTC GCAACAATTT TACAGATCAT
    CTTTATGCTG CCTTAGACCA AGCAGGTATC TATACGTTTC GGGACGGTAA TGAACTTCCT
    CCAGGACAGG AAATCTCCTC ACAACTCAGT AGGGCAATCC GAGAATCAAG GATTTCTGTA
    GTGGTTTTCT CCAAAGGCTA TGCTTCTTCT AGATGGTGTC TTGACGAACT CGTAAAGATT
    CTTGAGTGTA GGCATGCCAT GGGGCAGCTT CTTGTTCCTA TATTCTATGA TATCGATCCG
    TCATATGTGC GAAAACAGAA ATGGAATGTT GGTGAAGCTC TTAAGAGAAA AGAAGAAGAC
    TTTGAGATTG AAATGGAGAG GTTGAAAAGG TGGAGAGAAG CTCTTGATGA GGCTGGAAAT
    ATATCTGGAT GGATTCTGAA GGATATGGCA AACGGGTATG AATCGAAATT TATTCAAAAG
    ATTGTTGAAG ATTTGTTGCA TAAATTAGGT CCCAAATGCT TAGACGTTGC CAAGTATCCT
    GTAGGTATTG AGTCTCGTGT TGATTATATT ATTGACCTGC TAAGCATCCA CTCAAATGAT
    GTTCGAGTTG TGGGTGTGTA TGGGATGCCA GGAATAGGTA AAACAACAAT AGCGAAAGCT
    GTATTTAATC AACTATGTCA TGGATTTGAG GGAAGCTCTT TTATTTCGAA TGTCAAAGAA
    AAAACAGTAG AGCAATTACA AGAGCAGCTT CTTTGTGATA TTTTGAAACC AAATACTTGG
    AAGATCGATA ATGTTTCTAA AGGAGTCAAT TTGATGAAAG ATCGTTTTCG TAACAAAAGA
    GTTCTTGTTG TTCTTGATGA TTTTGATCAA CTTAAACAAC TAGAAGCATT GGTGAGAGAG
    AGAAATTGTT TTGGTCCAGG AAGTAGAATA GTCATTACAA CGAGAGATGA ACATTTACTA
    ACTCAAATTG AAGTGGATGG GAAATATCAT GTTAAGGAAT TGCATCAACA TGAATCCCTT
    CAGCTTTTTA GTTTGCACGC CTTTAAGGAC ACCCATCCAG AGGAAGATTA TGTGGAGCTA
    TCGAATGCTA TAGTTGACTA TGCTGGAGGG GTTCCCTTAG CTCTTGAAGT TTTAGGTTCT
    TATTTGTTCA GAAGAAACAT ATCTGTATGG AAAAGTGCTA TTAAGAAACT ACGGAAAATT
    CCAAACAGAC AAATTCAGAA AACACTTAGA ATAAGTTTTG ACACCTTGGA TGATGACAAA
    GTGAAGGCCA TGTTCCTCGA TATTGCATGC TTTTTCATTG GTTGGGACAA AGAATATGTA
    GTAGAAATAC TCGATGGTCG TGGCTTCTTT CCTGATATCG GCATTGATAT TCTCATCCAA
    AGGTCCCTCT TGTCAATTAA TGATGAAAAT GAGTTAAACA TGCATGACCT CATAAGAGAC
    ATGGGCAGGG AGATTGCTCG TGAAGTGTCA TATGACCATC CTGGAAAACG CAACAGAATT
    TGGCTTCTTG AGGATGCCTT AGATGTCCTC AACAACCAGA CGGGAACAGA TGCTGTGGAG
    GGTCTCGCAC TAGATGTTCG AGCATCAACA GTTGCATCTC TTAGCACAAA ATCATTTACA
    AATATGAGAC GTTTGAAATT ACTCCAAATC AATGGAGCAC ATCTTGCCGG AAGCTACAAG
    CTTCTACCGA ATGAGTTGAT ATGGCTTTGT TGGCTTGAAT GCCCTATGAA ATCTTTGCCA
    TCTGATCTCC AGCTAAACAA CCTGGTTGTT CTTGATTTGC AGCATAGTAA CATCGAAGAA
    CTTTGGAAGG GGACTAAGAT TCTCAATAAG CTTAAAATCC TCAATCTTAG CTATTCCAAG
    CTCCTTGTCA AAACACCAAA CTTCCAAGGA CTCCCTAGTT TGGAGATACT AAAACTTACA
    GCTTGCACGA GTTTGGCCAA GGTACATCCA TCTATTGGGC ATTTAAAAAG GCTTGTTTCG
    TTGAATTTGG AGGGATGTTG CAGGCTAAAA ACTCTTCCAG AAAGCATTTG CAACTTGAAA
    TCCATTGAAA CTCTAAATAT TAGTTTGTGC TCACAACTTG AGAAATTGCC AGAATTCTTG
    GGTGATATGG AATCCTTAAC TGAGTTGTTA GCAAATGGAA CTGCAATTAA GCAACTTCCC
    GCTTCAACTG GGTATTTGAA GAAGCTAACA AGGTTATCAT TGGTTGGAGA CAGCTACAAA
    CATGATCTAC AATCTAAATC ATGGTTTTCT CGATTTTCTT CATGGCTTTC ATGGCGAAGC
    TGTTCTACCT CCATAGCTAT GCTACCAACT CCTTTAACTG GTTTGACCTC ATTGAAAGAA
    CTAGATATAA GTTATTGTGG TCTACATGAA GCTTCAAGCT CCATTGATAT TGGGAGTTTG
    TCCTGTCTTG AAAAGCTGAA TTTGTCAGGG AGCAAATTCT CCAACCTGCC TTCTAGTATT
    GGGCACCTTC TTAATCTTAA GGATTTGTGG GTTCGTAGAT GCCCAAATCT ATTCCTATCA
    ACCTCAGAAC TTCCATTAAG TTTGACGAGG TTGTATGCTT GTATTTGCTC GACAATGGAA
    AGAGTGCCAG TTCTGGGAGA AAAGAGACTC TTAGTTACTT CAGTTGGCTG CCTAAATTTA
    ATAGAGTTTC GGCACATGGA ACTTCTGGAC ACTAGCTCAT CCATTCTGAA CTTTGATGAC
    TGCAACGATT TATCAAATAA TTATAAGGAA ACTCTTGTTC AGGAATTGTT CAAAGGTGAA
    ATGTGTGAGA TTAGCTTTTC TGCCAGTGAG ATACCAGAAT GGTTCAGCCT TCGGGGAGAA
    GGATCTTCAT TATCATTTCA TTTACCTTCA GTTTTAGGTT CATATGGTAA TCAACTCCAA
    GGGCTGCTTA TTGGGGTTGT CTATGCCACC TCTTTAGAAG GGTCATTTGC TCCGTGTAGA
    ACTCTTTTAA GAAATAAGAG CAACGGTAAG GTAATGTTTG AAAGGTCCAG CAGCATCAAA
    TTTGACCCAA GTTCCACTAG GAATTCTTGG ATTCTGAGTC TACCGTTGAT TGGGGGGTAT
    CGATGCGCAG TGAAAGGAGT GGAGGAATTG GAGCTGAATG TAGAAATAAG CTCCAGTGGA
    GTTGAACAGT GTGGGGTTCA TCTGATAACA AAAAATAATG CTGTTTCAAA TATTGGTAAG
    TTGGATCGTG ACATTTACAG CCTTGCTCGA ACAGATACAA TGATAGTTCC ATCTTACCAT
    CATCAAGCCG TAGCGTCTTC ATCTCCTAAT GAATGGTTGG AAAGTTGTTT AACAAGGGAG
    TTGCAAAGAT GGAAAATTTA CTCCGCGATT AAGGTTTCAT TTGGTATGGA TTTTATATAT
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447666.1
    CDS216..3638
    Translation

    Target ORF information:

    RefSeq Version XM_024591898.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa TMV resistance protein N (LOC18107951), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024591898.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGGCTTCTG TATCCTTTGA GTCCCATTCC TCTTCTTCAT CCTCTTCTAG ACATGGATCG 
    ACCTACGATG TCTTTTTGAG TTTTAGAGGA GCAGATACTC GCAACAATTT TACAGATCAT
    CTTTATGCTG CCTTAGACCA AGCAGGTATC TATACGTTTC GGGACGGTAA TGAACTTCCT
    CCAGGACAGG AAATCTCCTC ACAACTCAGT AGGGCAATCC GAGAATCAAG GATTTCTGTA
    GTGGTTTTCT CCAAAGGCTA TGCTTCTTCT AGATGGTGTC TTGACGAACT CGTAAAGATT
    CTTGAGTGTA GGCATGCCAT GGGGCAGCTT CTTGTTCCTA TATTCTATGA TATCGATCCG
    TCATATGTGC GAAAACAGAA ATGGAATGTT GGTGAAGCTC TTAAGAGAAA AGAAGAAGAC
    TTTGAGATTG AAATGGAGAG GTTGAAAAGG TGGAGAGAAG CTCTTGATGA GGCTGGAAAT
    ATATCTGGAT GGATTCTGAA GGATATGGCA AACGGGTATG AATCGAAATT TATTCAAAAG
    ATTGTTGAAG ATTTGTTGCA TAAATTAGGT CCCAAATGCT TAGACGTTGC CAAGTATCCT
    GTAGGTATTG AGTCTCGTGT TGATTATATT ATTGACCTGC TAAGCATCCA CTCAAATGAT
    GTTCGAGTTG TGGGTGTGTA TGGGATGCCA GGAATAGGTA AAACAACAAT AGCGAAAGCT
    GTATTTAATC AACTATGTCA TGGATTTGAG GGAAGCTCTT TTATTTCGAA TGTCAAAGAA
    AAAACAGTAG AGCAATTACA AGAGCAGCTT CTTTGTGATA TTTTGAAACC AAATACTTGG
    AAGATCGATA ATGTTTCTAA AGGAGTCAAT TTGATGAAAG ATCGTTTTCG TAACAAAAGA
    GTTCTTGTTG TTCTTGATGA TTTTGATCAA CTTAAACAAC TAGAAGCATT GGTGAGAGAG
    AGAAATTGTT TTGGTCCAGG AAGTAGAATA GTCATTACAA CGAGAGATGA ACATTTACTA
    ACTCAAATTG AAGTGGATGG GAAATATCAT GTTAAGGAAT TGCATCAACA TGAATCCCTT
    CAGCTTTTTA GTTTGCACGC CTTTAAGGAC ACCCATCCAG AGGAAGATTA TGTGGAGCTA
    TCGAATGCTA TAGTTGACTA TGCTGGAGGG GTTCCCTTAG CTCTTGAAGT TTTAGGTTCT
    TATTTGTTCA GAAGAAACAT ATCTGTATGG AAAAGTGCTA TTAAGAAACT ACGGAAAATT
    CCAAACAGAC AAATTCAGAA AACACTTAGA ATAAGTTTTG ACACCTTGGA TGATGACAAA
    GTGAAGGCCA TGTTCCTCGA TATTGCATGC TTTTTCATTG GTTGGGACAA AGAATATGTA
    GTAGAAATAC TCGATGGTCG TGGCTTCTTT CCTGATATCG GCATTGATAT TCTCATCCAA
    AGGTCCCTCT TGTCAATTAA TGATGAAAAT GAGTTAAACA TGCATGACCT CATAAGAGAC
    ATGGGCAGGG AGATTGCTCG TGAAGTGTCA TATGACCATC CTGGAAAACG CAACAGAATT
    TGGCTTCTTG AGGATGCCTT AGATGTCCTC AACAACCAGA CGGGAACAGA TGCTGTGGAG
    GGTCTCGCAC TAGATGTTCG AGCATCAACA GTTGCATCTC TTAGCACAAA ATCATTTACA
    AATATGAGAC GTTTGAAATT ACTCCAAATC AATGGAGCAC ATCTTGCCGG AAGCTACAAG
    CTTCTACCGA ATGAGTTGAT ATGGCTTTGT TGGCTTGAAT GCCCTATGAA ATCTTTGCCA
    TCTGATCTCC AGCTAAACAA CCTGGTTGTT CTTGATTTGC AGCATAGTAA CATCGAAGAA
    CTTTGGAAGG GGACTAAGAT TCTCAATAAG CTTAAAATCC TCAATCTTAG CTATTCCAAG
    CTCCTTGTCA AAACACCAAA CTTCCAAGGA CTCCCTAGTT TGGAGATACT AAAACTTACA
    GCTTGCACGA GTTTGGCCAA GGTACATCCA TCTATTGGGC ATTTAAAAAG GCTTGTTTCG
    TTGAATTTGG AGGGATGTTG CAGGCTAAAA ACTCTTCCAG AAAGCATTTG CAACTTGAAA
    TCCATTGAAA CTCTAAATAT TAGTTTGTGC TCACAACTTG AGAAATTGCC AGAATTCTTG
    GGTGATATGG AATCCTTAAC TGAGTTGTTA GCAAATGGAA CTGCAATTAA GCAACTTCCC
    GCTTCAACTG GGTATTTGAA GAAGCTAACA AGGTTATCAT TGGTTGGAGA CAGCTACAAA
    CATGATCTAC AATCTAAATC ATGGTTTTCT CGATTTTCTT CATGGCTTTC ATGGCGAAGC
    TGTTCTACCT CCATAGCTAT GCTACCAACT CCTTTAACTG GTTTGACCTC ATTGAAAGAA
    CTAGATATAA GTTATTGTGG TCTACATGAA GCTTCAAGCT CCATTGATAT TGGGAGTTTG
    TCCTGTCTTG AAAAGCTGAA TTTGTCAGGG AGCAAATTCT CCAACCTGCC TTCTAGTATT
    GGGCACCTTC TTAATCTTAA GGATTTGTGG GTTCGTAGAT GCCCAAATCT ATTCCTATCA
    ACCTCAGAAC TTCCATTAAG TTTGACGAGG TTGTATGCTT GTATTTGCTC GACAATGGAA
    AGAGTGCCAG TTCTGGGAGA AAAGAGACTC TTAGTTACTT CAGTTGGCTG CCTAAATTTA
    ATAGAGTTTC GGCACATGGA ACTTCTGGAC ACTAGCTCAT CCATTCTGAA CTTTGATGAC
    TGCAACGATT TATCAAATAA TTATAAGGAA ACTCTTGTTC AGGAATTGTT CAAAGGTGAA
    ATGTGTGAGA TTAGCTTTTC TGCCAGTGAG ATACCAGAAT GGTTCAGCCT TCGGGGAGAA
    GGATCTTCAT TATCATTTCA TTTACCTTCA GTTTTAGGTT CATATGGTAA TCAACTCCAA
    GGGCTGCTTA TTGGGGTTGT CTATGCCACC TCTTTAGAAG GGTCATTTGC TCCGTGTAGA
    ACTCTTTTAA GAAATAAGAG CAACGGTAAG GTAATGTTTG AAAGGTCCAG CAGCATCAAA
    TTTGACCCAA GTTCCACTAG GAATTCTTGG ATTCTGAGTC TACCGTTGAT TGGGGGGTAT
    CGATGCGCAG TGAAAGGAGT GGAGGAATTG GAGCTGAATG TAGAAATAAG CTCCAGTGGA
    GTTGAACAGT GTGGGGTTCA TCTGATAACA AAAAATAATG CTGTTTCAAA TATTGGTAAG
    TTGGATCGTG ACATTTACAG CCTTGCTCGA ACAGATACAA TGATAGTTCC ATCTTACCAT
    CATCAAGCCG TAGCGTCTTC ATCTCCTAAT GAATGGTTGG AAAGTTGTTT AACAAGGGAG
    TTGCAAAGAT GGAAAATTTA CTCCGCGATT AAGGTTTCAT TTGGTATGGA TTTTATATAT
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D