Gene Symbol | Rnps1 |
Entrez Gene ID | 287113 |
Full Name | RNA binding protein with serine rich domain 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Rnps1 cDNA ORF clone
Gene Symbol | Rnps1 |
Entrez Gene ID | 287113 |
Full Name | RNA binding protein with serine rich domain 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006245931.3 | XP_006245993.1 | RNA-binding protein with serine-rich domain 1 isoform X1 |
XM_006245932.3 | XP_006245994.1 | RNA-binding protein with serine-rich domain 1 isoform X1 |
NM_001011890.1 | NP_001011890.1 | RNA-binding protein with serine-rich domain 1 |
XM_006245933.2 | XP_006245995.1 | RNA-binding protein with serine-rich domain 1 isoform X2 |
Canis lupus familiaris (dog) | RNPS1 | XP_005621745.1 |
Xenopus tropicalis (tropical clawed frog) | rnps1 | NP_001015956.1 |
Rattus norvegicus (Norway rat) | Rnps1 | NP_001011890.1 |
Gallus gallus (chicken) | RNPS1 | XP_004945498.1 |
Homo sapiens (human) | RNPS1 | NP_001273554.1 |
Bos taurus (cattle) | RNPS1 | NP_001095311.1 |
Pan troglodytes (chimpanzee) | RNPS1 | XP_003952811.1 |
LOC695816 | XP_001084468.2 | |
Mus musculus (house mouse) | Rnps1 | NP_001073596.1 |
Danio rerio (zebrafish) | rnps1 | NP_956055.1 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
The structure of the ASAP core complex reveals the existence of a Pinin-containing PSAP complex.
Murachelli AG, Ebert J, Basquin C, Le Hir H, Conti E
Nature structural & molecular biology19(4)378-86(2012 Mar)
Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators.
Michelle L, Cloutier A, Toutant J, Shkreta L, Thibault P, Durand M, Garneau D, Gendron D, Lapointe E, Couture S, Le Hir H, Klinck R, Elela SA, Prinos P, Chabot B
Molecular and cellular biology32(5)954-67(2012 Mar)
Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements.
Gehring NH, Kunz JB, Neu-Yilik G, Breit S, Viegas MH, Hentze MW, Kulozik AE
Molecular cell20(1)65-75(2005 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Rnps1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rnps1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa01440 | |
Clone ID Related Accession (Same CDS sequence) | XM_006245931.3 , XM_006245932.3 , NM_001011890.1 | |
Accession Version | NM_001011890.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 918bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-26 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | RNA-binding protein with serine-rich domain 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079014.1. On Feb 11, 2005 this sequence version replaced XM_237758.2. ##Evidence-Data-START## Transcript exon combination :: BC079014.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGATTTAT CAGGAGTGAA AAAGAAGAGC TTGCTAGGAG TCAAAGAGAA TAATAAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001011890.1 |
CDS | 174..1091 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001011890.1 |
1 | ATGGATTTAT CAGGAGTGAA AAAGAAGAGC TTGCTAGGAG TCAAAGAGAA TAATAAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa01440 | |
Clone ID Related Accession (Same CDS sequence) | XM_006245931.3 , XM_006245932.3 , NM_001011890.1 | |
Accession Version | XM_006245931.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 918bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | RNA-binding protein with serine-rich domain 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006245931.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTTAT CAGGAGTGAA AAAGAAGAGC TTGCTAGGAG TCAAAGAGAA TAATAAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006245993.1 |
CDS | 614..1531 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006245931.3 |
1 | ATGGATTTAT CAGGAGTGAA AAAGAAGAGC TTGCTAGGAG TCAAAGAGAA TAATAAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa01440 | |
Clone ID Related Accession (Same CDS sequence) | XM_006245931.3 , XM_006245932.3 , NM_001011890.1 | |
Accession Version | XM_006245932.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 918bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | RNA-binding protein with serine-rich domain 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006245932.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTTAT CAGGAGTGAA AAAGAAGAGC TTGCTAGGAG TCAAAGAGAA TAATAAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006245994.1 |
CDS | 319..1236 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006245932.3 |
1 | ATGGATTTAT CAGGAGTGAA AAAGAAGAGC TTGCTAGGAG TCAAAGAGAA TAATAAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa32851 | |
Clone ID Related Accession (Same CDS sequence) | XM_006245933.2 | |
Accession Version | XM_006245933.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | RNA-binding protein with serine-rich domain 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006245933.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCCTT CTCCTACCAA ACGAAAGGAC CGCTCTGATG AGAAGTCCAA GGATCGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006245995.1 |
CDS | 182..1030 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006245933.2 |
1 | ATGGCTCCTT CTCCTACCAA ACGAAAGGAC CGCTCTGATG AGAAGTCCAA GGATCGATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |
The structure of the ASAP core complex reveals the existence of a Pinin-containing PSAP complex. |
Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators. |
Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements. |