Gene Symbol | Lrrtm4 |
Entrez Gene ID | 500219 |
Full Name | leucine rich repeat transmembrane neuronal 4 |
Synonyms | RGD1560707 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Lrrtm4 cDNA ORF clone
gRNAs
Gene Symbol | Lrrtm4 |
Entrez Gene ID | 500219 |
Full Name | leucine rich repeat transmembrane neuronal 4 |
Synonyms | RGD1560707 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008763026.2 | XP_008761248.2 | leucine-rich repeat transmembrane neuronal protein 4 isoform X2 |
XM_017592812.1 | XP_017448301.1 | leucine-rich repeat transmembrane neuronal protein 4 isoform X3 |
NM_001134746.1 | NP_001128218.1 | leucine-rich repeat transmembrane neuronal protein 4 precursor |
XM_008763025.2 | XP_008761247.2 | leucine-rich repeat transmembrane neuronal protein 4 isoform X2 |
XM_017592811.1 | XP_017448300.1 | leucine-rich repeat transmembrane neuronal protein 4 isoform X1 |
Homo sapiens (human) | LRRTM4 | NP_001128217.1 |
Mus musculus (house mouse) | Lrrtm4 | NP_001128215.1 |
Gallus gallus (chicken) | LRRTM4 | XP_004947696.1 |
Danio rerio (zebrafish) | lrrtm4 | XP_692159.4 |
Pan troglodytes (chimpanzee) | LRRTM4 | XP_001163369.2 |
LRRTM4 | XP_001112174.2 | |
Canis lupus familiaris (dog) | LRRTM4 | XP_005630557.1 |
Rattus norvegicus (Norway rat) | Lrrtm4 | NP_001128218.1 |
Danio rerio (zebrafish) | LOC100333709 | XP_005172519.1 |
Bos taurus (cattle) | LRRTM4 | XP_003586684.1 |
Xenopus tropicalis (tropical clawed frog) | lrrtm4 | XP_002932606.1 |
Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins.
Um JW, Pramanik G, Ko JS, Song MY, Lee D, Kim H, Park KS, S?dhof TC, Tabuchi K, Ko J
Cell reports6(6)1096-1109(2014 Mar)
Unbiased discovery of glypican as a receptor for LRRTM4 in regulating excitatory synapse development.
de Wit J, O'Sullivan ML, Savas JN, Condomitti G, Caccese MC, Vennekens KM, Yates JR 3rd, Ghosh A
Neuron79(4)696-711(2013 Aug)
An LRRTM4-HSPG complex mediates excitatory synapse development on dentate gyrus granule cells.
Siddiqui TJ, Tari PK, Connor SA, Zhang P, Dobie FA, She K, Kawabe H, Wang YT, Brose N, Craig AM
Neuron79(4)680-95(2013 Aug)
High-resolution proteomics unravel architecture and molecular diversity of native AMPA receptor complexes.
Schwenk J, Harmel N, Brechet A, Zolles G, Berkefeld H, M?ller CS, Bildl W, Baehrens D, H?ber B, Kulik A, Kl?cker N, Schulte U, Fakler B
Neuron74(4)621-33(2012 May)
An unbiased expression screen for synaptogenic proteins identifies the LRRTM protein family as synaptic organizers.
Linhoff MW, Laur?n J, Cassidy RM, Dobie FA, Takahashi H, Nygaard HB, Airaksinen MS, Strittmatter SM, Craig AM
Neuron61(5)734-49(2009 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Lrrtm4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Lrrtm4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa03543 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763026.2 , NM_001134746.1 , XM_008763025.2 | |
Accession Version | NM_001134746.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1773bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-20 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | leucine-rich repeat transmembrane neuronal protein 4 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC168219.1. On or before Sep 5, 2008 this sequence version replaced XM_001065407.1, XM_575570.2. ##Evidence-Data-START## Transcript exon combination :: BC168219.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGTTTCC GTCTAATCAC GCAGCTGAAA GGCATGAGTG TGCTTCTGGT GCTATTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001128218.1 |
CDS | 7..1779 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGGTTTCC GTCTAATCAC GCAGCTGAAA GGCATGAGTG TGCTTCTGGT GCTATTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa03543 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763026.2 , NM_001134746.1 , XM_008763025.2 | |
Accession Version | XM_008763026.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1773bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | leucine-rich repeat transmembrane neuronal protein 4 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008763026.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTTCC GTCTAATCAC GCAGCTGAAA GGCATGAGTG TGCTTCTGGT GCTATTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008761248.2 |
CDS | 392..2164 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGTTTCC GTCTAATCAC GCAGCTGAAA GGCATGAGTG TGCTTCTGGT GCTATTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa03543 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763026.2 , NM_001134746.1 , XM_008763025.2 | |
Accession Version | XM_008763025.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1773bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | leucine-rich repeat transmembrane neuronal protein 4 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008763025.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTTCC GTCTAATCAC GCAGCTGAAA GGCATGAGTG TGCTTCTGGT GCTATTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008761247.2 |
CDS | 481..2253 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGTTTCC GTCTAATCAC GCAGCTGAAA GGCATGAGTG TGCTTCTGGT GCTATTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa60974 | |
Clone ID Related Accession (Same CDS sequence) | XM_017592811.1 | |
Accession Version | XM_017592811.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | leucine-rich repeat transmembrane neuronal protein 4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGGTT TCCGTCTAAT CACGCAGCTG AAAGGCATGA GTGTGCTTCT GGTGCTATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448300.1 |
CDS | 326..2101 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGGTT TCCGTCTAAT CACGCAGCTG AAAGGCATGA GTGTGCTTCT GGTGCTATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa60975 | |
Clone ID Related Accession (Same CDS sequence) | XM_017592812.1 | |
Accession Version | XM_017592812.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1638bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | leucine-rich repeat transmembrane neuronal protein 4 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGGTT TCCGTCTAAT CACGCAGCTG AAAGGCATGA GTGTGCTTCT GGTGCTATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448301.1 |
CDS | 323..1960 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGGTT TCCGTCTAAT CACGCAGCTG AAAGGCATGA GTGTGCTTCT GGTGCTATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins. |
Unbiased discovery of glypican as a receptor for LRRTM4 in regulating excitatory synapse development. |
An LRRTM4-HSPG complex mediates excitatory synapse development on dentate gyrus granule cells. |
High-resolution proteomics unravel architecture and molecular diversity of native AMPA receptor complexes. |
An unbiased expression screen for synaptogenic proteins identifies the LRRTM protein family as synaptic organizers. |