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Runx1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Runx1
Entrez Gene ID 50662
Full Name runt-related transcription factor 1
Synonyms Aml1,B,CBF-alpha-2,Cbfa2,PEA2-alpha,PEBP2-alpha
General protein information
Preferred Names

runt-related transcription factor 1

Names

runt-related transcription factor 1
PEA2-alpha B
PEBP2-alpha B
acute myeloid leukemia 1 protein
core-binding factor runt domain alpha subunit 2 (acute myeloid leukemia 1 oncogene)
core-binding factor subunit alpha-2
oncogene AML-1
polyomavirus enhancer-binding protein 2 alpha B subunit
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

11

11q11
Summary putative transcription factor that may be involved in skeletal muscle gene regulation; human homolog is associated with a form of acute myeloid leukemia [RGD, Feb 2006].

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_008768599.2 XP_008766821.2 runt-related transcription factor 1 isoform X3
XM_008768598.2 XP_008766820.2 runt-related transcription factor 1 isoform X2
XM_017598053.1 XP_017453542.1 runt-related transcription factor 1 isoform X1
NM_017325.2 NP_059021.1 runt-related transcription factor 1

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) RUNX1 XP_849375.2
Rattus norvegicus (Norway rat) Runx1 NP_059021.1
Pan troglodytes (chimpanzee) RUNX1 XP_003949210.1
RUNX1 XP_002803189.1
Mus musculus (house mouse) Runx1 NP_001104491.1
Homo sapiens (human) RUNX1 NP_001745.2
Danio rerio (zebrafish) runx1 NP_571678.1
Bos taurus (cattle) RUNX1 NP_001243507.1
Xenopus tropicalis (tropical clawed frog) runx1 XP_002939387.2

Gene Ontology


Bibliography

Related articles in PubMed

Sensory neuron differentiation potential of in utero mesenchymal stem cell transplantation in rat fetuses with spina bifida aperta.
Ma W, Wei X, Gu H, Li H, Guan K, Liu D, Chen L, Cao S, An D, Zhang H, Huang T, Miao J, Zhao G, Wu D, Liu B, Wang W, Yuan Z
Birth defects research. Part A, Clinical and molecular teratology103(9)772-9(2015 Sep)

Incoherent feed-forward regulatory loops control segregation of C-mechanoreceptors, nociceptors, and pruriceptors.
Lou S, Pan X, Huang T, Duan B, Yang FC, Yang J, Xiong M, Liu Y, Ma Q
The Journal of neuroscience : the official journal of the Society for Neuroscience35(13)5317-29(2015 Apr)

Transcription factor Runx1 inhibits proliferation and promotes developmental maturation in a selected population of inner olfactory nerve layer olfactory ensheathing cells.
Murthy M, Bocking S, Verginelli F, Stifani S
Gene540(2)191-200(2014 May)

Transcriptomics of post-stroke angiogenesis in the aged brain.
Buga AM, Margaritescu C, Scholz CJ, Radu E, Zelenak C, Popa-Wagner A
Frontiers in aging neuroscience644(2014)

Loss of Usp9x disrupts cortical architecture, hippocampal development and TGF?-mediated axonogenesis.
Stegeman S, Jolly LA, Premarathne S, Gecz J, Richards LJ, Mackay-Sim A, Wood SA
PloS one8(7)e68287(2013)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Runx1 up-regulates TRPV1 transcription activity.
Title: Transcription of the pain-related TRPV1 gene requires Runx1 and C/EBP? factors.

Site-directed mutagenesis of the proximal Runx1 and C/EBPbeta consensus elements in the P2X3 promoter decrease Runx1- and C/EBPbeta-mediated transcriptional activity.
Title: Runx1 and C/EBP? transcription factors directly up-regulate P2X3 gene transcription.

findings provide experimental evidence that the LH-dependent induction of Ptgs2 expression results, in part, from RUNX1-mediated transactivation of the Ptgs2 promoter.
Title: Runt-related transcription factor 1 regulates luteinized hormone-induced prostaglandin-endoperoxide synthase 2 expression in rat periovulatory granulosa cells.

hormonally regulated expression of Runx1 in periovulatory follicles, its involvement in progesterone production, and regulation of preovulatory gene expression suggest important roles of RUNX1 in the periovulatory process
Title: Luteinizing hormone-induced RUNX1 regulates the expression of genes in granulosa cells of rat periovulatory follicles.

RUNX1 and RUNX2 regulate TIMP1 gene expression
Title: Regulation of tissue inhibitor of metalloproteinase 1 gene transcription by RUNX1 and RUNX2.

The following Runx1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Runx1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa43392 NM_017325.2
Latest version!		 Rattus norvegicus RUNX family transcription factor 1 (Runx1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $265.30
$379.00
ORa57705 XM_017598053.1
Latest version!		 Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00
ORa57706 XM_008768598.2
Latest version!		 Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00
ORa57707 XM_008768599.2
Latest version!		 Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa43392
Clone ID Related Accession (Same CDS sequence) NM_017325.2
Accession Version NM_017325.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1353bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-12
Organism Rattus norvegicus(Norway rat)
Product runt-related transcription factor 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07033639.1 and AABR07033638.1. On Jun 11, 2015 this sequence version replaced NM_017325.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: L35271.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGCGTATCC CCGTAGATGC CAGCACGAGC CGCCGCTTCA CGCCGCCTTC CACCGCGCTG 
AGCCCCGGCA AGATGAGCGA GGCGCTGCCG CTGGGCGCCC CGGATGGCGG CGCCGCCCTG 
GCCAGCAAGC TGAGGAGCGG CGACCGCAGC ATGGTGGAGG TACTAGCTGA CCACCCCGGC 
GAGCTAGTCC GCACCGACAG CCCCAACTTC CTCTGCTCCG TGCTGCCCAC TCACTGGCGC 
TGCAACAAGA CCCTGCCCAT CGCTTTCAAG GTGGTAGCGC TGGGCGACGT TCCGGATGGC 
ACTCTGGTCA CCGTCATGGC GGGCAATGAC GAAAACTACT CGGCGGAGCT GAGAAACGCC 
ACCGCGGCCA TGAAGAACCA AGTGGCGAGA TTCAACGACC TCAGGTTTGT CGGTCGGAGC 
GGCAGAGGCA AGAGCTTCAC TCTGACCATC ACCGTCTTTA CAAACCCCCC ACAAGTTGCC 
ACCTACCATA GAGCCATCAA AATCACAGTG GACGGCCCCC GAGAACCCCG AAGACATCGG 
CAGAAACTAG ATGATCAGAC CAAGCCCGGG AGTTTGTCCT TTTCCGAGCG GCTCAGTGAA 
CTGGAGCAGC TGCGGCGCAC GGCCATGAGG GTCAGCCCGC ATCACCCAGC CCCCACGCCC 
AACCCTCGGG CCTCCTTGAA CCACTCCACT GCCTTTAACC CTCAGCCTCA AAGTCAGATG 
CAGGATGCCA GGCAGATCCA GCCGTCCCCA CCGTGGTCCT ATGACCAGTC TTACCAGTAC 
CTGGGGTCCA TCACCTCTTC TGTGCACCCG GCGACACCCA TTTCTCCCGG CCGAGCCAGT 
GGCATGACCA GCCTCTCAGC GGAACTTTCC AGTCGACTCT CAACAGCCCC GGACCTGACA 
GCCTTCGGCG ACCCGCGCCA GTTCCCCACG CTGCCGTCCA TCTCCGACCC GCGCATGCAC 
TACCCAGGCG CCTTCACCTA CTCGCCTCCT GTCACATCGG GCATCGGCAT TGGCATGTCA 
GCCATGAGCT CGACCTCTCG CTACCACACC TACCTGCCGC CGCCCTACCC AGGCTCCTCG 
CAGGCGCAGG CCGGGCCCTT CCAGACCGGC TCGCCCTCCT ACCACCTGTA CTACGGCACC 
TCGGCAGGCT CCTACCAATT CTCCATGGTG GGCGGCGAGC GATCACCCCC GCGCATCCTG 
CCGCCCTGCA CCAACGCGTC CACCGGAGCC GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG 
AGCGACGTGG TGGAAACCGA GGGCAGCCAT AGCAACTCGC CCACCAACAT GCCACCCGCG 
CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_059021.1
CDS400..1752
Translation

Target ORF information:

RefSeq Version NM_017325.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus RUNX family transcription factor 1 (Runx1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_017325.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGCGTATCC CCGTAGATGC CAGCACGAGC CGCCGCTTCA CGCCGCCTTC CACCGCGCTG 
AGCCCCGGCA AGATGAGCGA GGCGCTGCCG CTGGGCGCCC CGGATGGCGG CGCCGCCCTG 
GCCAGCAAGC TGAGGAGCGG CGACCGCAGC ATGGTGGAGG TACTAGCTGA CCACCCCGGC 
GAGCTAGTCC GCACCGACAG CCCCAACTTC CTCTGCTCCG TGCTGCCCAC TCACTGGCGC 
TGCAACAAGA CCCTGCCCAT CGCTTTCAAG GTGGTAGCGC TGGGCGACGT TCCGGATGGC 
ACTCTGGTCA CCGTCATGGC GGGCAATGAC GAAAACTACT CGGCGGAGCT GAGAAACGCC 
ACCGCGGCCA TGAAGAACCA AGTGGCGAGA TTCAACGACC TCAGGTTTGT CGGTCGGAGC 
GGCAGAGGCA AGAGCTTCAC TCTGACCATC ACCGTCTTTA CAAACCCCCC ACAAGTTGCC 
ACCTACCATA GAGCCATCAA AATCACAGTG GACGGCCCCC GAGAACCCCG AAGACATCGG 
CAGAAACTAG ATGATCAGAC CAAGCCCGGG AGTTTGTCCT TTTCCGAGCG GCTCAGTGAA 
CTGGAGCAGC TGCGGCGCAC GGCCATGAGG GTCAGCCCGC ATCACCCAGC CCCCACGCCC 
AACCCTCGGG CCTCCTTGAA CCACTCCACT GCCTTTAACC CTCAGCCTCA AAGTCAGATG 
CAGGATGCCA GGCAGATCCA GCCGTCCCCA CCGTGGTCCT ATGACCAGTC TTACCAGTAC 
CTGGGGTCCA TCACCTCTTC TGTGCACCCG GCGACACCCA TTTCTCCCGG CCGAGCCAGT 
GGCATGACCA GCCTCTCAGC GGAACTTTCC AGTCGACTCT CAACAGCCCC GGACCTGACA 
GCCTTCGGCG ACCCGCGCCA GTTCCCCACG CTGCCGTCCA TCTCCGACCC GCGCATGCAC 
TACCCAGGCG CCTTCACCTA CTCGCCTCCT GTCACATCGG GCATCGGCAT TGGCATGTCA 
GCCATGAGCT CGACCTCTCG CTACCACACC TACCTGCCGC CGCCCTACCC AGGCTCCTCG 
CAGGCGCAGG CCGGGCCCTT CCAGACCGGC TCGCCCTCCT ACCACCTGTA CTACGGCACC 
TCGGCAGGCT CCTACCAATT CTCCATGGTG GGCGGCGAGC GATCACCCCC GCGCATCCTG 
CCGCCCTGCA CCAACGCGTC CACCGGAGCC GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG 
AGCGACGTGG TGGAAACCGA GGGCAGCCAT AGCAACTCGC CCACCAACAT GCCACCCGCG 
CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa57705
Clone ID Related Accession (Same CDS sequence) XM_017598053.1
Accession Version XM_017598053.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1395bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product runt-related transcription factor 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT 
GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC 
GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC 
GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC 
AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC 
ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG 
GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC 
CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC 
ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC 
AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG 
ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC 
ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG 
AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC 
CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT 
TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA 
GCGGAACTTT CCAGTCGACT CTCAACAGCC CCGGACCTGA CAGCCTTCGG CGACCCGCGC 
CAGTTCCCCA CGCTGCCGTC CATCTCCGAC CCGCGCATGC ACTACCCAGG CGCCTTCACC 
TACTCGCCTC CTGTCACATC GGGCATCGGC ATTGGCATGT CAGCCATGAG CTCGACCTCT 
CGCTACCACA CCTACCTGCC GCCGCCCTAC CCAGGCTCCT CGCAGGCGCA GGCCGGGCCC 
TTCCAGACCG GCTCGCCCTC CTACCACCTG TACTACGGCA CCTCGGCAGG CTCCTACCAA 
TTCTCCATGG TGGGCGGCGA GCGATCACCC CCGCGCATCC TGCCGCCCTG CACCAACGCG 
TCCACCGGAG CCGCGCTGCT CAACCCCAGC CTCCCCAGCC AGAGCGACGT GGTGGAAACC 
GAGGGCAGCC ATAGCAACTC GCCCACCAAC ATGCCACCCG CGCGCCTGGA GGAGGCTGTC 
TGGCGGCCCT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017453542.1
CDS239..1633
Translation

Target ORF information:

RefSeq Version XM_017598053.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017598053.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT 
GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC 
GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC 
GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC 
AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC 
ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG 
GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC 
CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC 
ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC 
AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG 
ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC 
ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG 
AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC 
CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT 
TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA 
GCGGAACTTT CCAGTCGACT CTCAACAGCC CCGGACCTGA CAGCCTTCGG CGACCCGCGC 
CAGTTCCCCA CGCTGCCGTC CATCTCCGAC CCGCGCATGC ACTACCCAGG CGCCTTCACC 
TACTCGCCTC CTGTCACATC GGGCATCGGC ATTGGCATGT CAGCCATGAG CTCGACCTCT 
CGCTACCACA CCTACCTGCC GCCGCCCTAC CCAGGCTCCT CGCAGGCGCA GGCCGGGCCC 
TTCCAGACCG GCTCGCCCTC CTACCACCTG TACTACGGCA CCTCGGCAGG CTCCTACCAA 
TTCTCCATGG TGGGCGGCGA GCGATCACCC CCGCGCATCC TGCCGCCCTG CACCAACGCG 
TCCACCGGAG CCGCGCTGCT CAACCCCAGC CTCCCCAGCC AGAGCGACGT GGTGGAAACC 
GAGGGCAGCC ATAGCAACTC GCCCACCAAC ATGCCACCCG CGCGCCTGGA GGAGGCTGTC 
TGGCGGCCCT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa57706
Clone ID Related Accession (Same CDS sequence) XM_008768598.2
Accession Version XM_008768598.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1392bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product runt-related transcription factor 1 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768598.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT 
GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC 
GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC 
GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC 
AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC 
ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG 
GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC 
CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC 
ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC 
AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG 
ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC 
ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG 
AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC 
CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT 
TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA 
GCGGAACTTT CCAGTCGACT CTCAACCCCG GACCTGACAG CCTTCGGCGA CCCGCGCCAG 
TTCCCCACGC TGCCGTCCAT CTCCGACCCG CGCATGCACT ACCCAGGCGC CTTCACCTAC 
TCGCCTCCTG TCACATCGGG CATCGGCATT GGCATGTCAG CCATGAGCTC GACCTCTCGC 
TACCACACCT ACCTGCCGCC GCCCTACCCA GGCTCCTCGC AGGCGCAGGC CGGGCCCTTC 
CAGACCGGCT CGCCCTCCTA CCACCTGTAC TACGGCACCT CGGCAGGCTC CTACCAATTC 
TCCATGGTGG GCGGCGAGCG ATCACCCCCG CGCATCCTGC CGCCCTGCAC CAACGCGTCC 
ACCGGAGCCG CGCTGCTCAA CCCCAGCCTC CCCAGCCAGA GCGACGTGGT GGAAACCGAG 
GGCAGCCATA GCAACTCGCC CACCAACATG CCACCCGCGC GCCTGGAGGA GGCTGTCTGG 
CGGCCCTACT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_008766820.2
CDS239..1630
Translation

Target ORF information:

RefSeq Version XM_008768598.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_008768598.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT 
GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC 
GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC 
GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC 
AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC 
ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG 
GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC 
CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC 
ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC 
AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG 
ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC 
ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG 
AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC 
CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT 
TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA 
GCGGAACTTT CCAGTCGACT CTCAACCCCG GACCTGACAG CCTTCGGCGA CCCGCGCCAG 
TTCCCCACGC TGCCGTCCAT CTCCGACCCG CGCATGCACT ACCCAGGCGC CTTCACCTAC 
TCGCCTCCTG TCACATCGGG CATCGGCATT GGCATGTCAG CCATGAGCTC GACCTCTCGC 
TACCACACCT ACCTGCCGCC GCCCTACCCA GGCTCCTCGC AGGCGCAGGC CGGGCCCTTC 
CAGACCGGCT CGCCCTCCTA CCACCTGTAC TACGGCACCT CGGCAGGCTC CTACCAATTC 
TCCATGGTGG GCGGCGAGCG ATCACCCCCG CGCATCCTGC CGCCCTGCAC CAACGCGTCC 
ACCGGAGCCG CGCTGCTCAA CCCCAGCCTC CCCAGCCAGA GCGACGTGGT GGAAACCGAG 
GGCAGCCATA GCAACTCGCC CACCAACATG CCACCCGCGC GCCTGGAGGA GGCTGTCTGG 
CGGCCCTACT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa57707
Clone ID Related Accession (Same CDS sequence) XM_008768599.2
Accession Version XM_008768599.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1203bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product runt-related transcription factor 1 isoform X3
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768599.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT 
GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC 
GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC 
GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC 
AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC 
ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG 
GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC 
CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC 
ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC 
AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAATGCCA GGCAGATCCA GCCGTCCCCA 
CCGTGGTCCT ATGACCAGTC TTACCAGTAC CTGGGGTCCA TCACCTCTTC TGTGCACCCG 
GCGACACCCA TTTCTCCCGG CCGAGCCAGT GGCATGACCA GCCTCTCAGC GGAACTTTCC 
AGTCGACTCT CAACAGCCCC GGACCTGACA GCCTTCGGCG ACCCGCGCCA GTTCCCCACG 
CTGCCGTCCA TCTCCGACCC GCGCATGCAC TACCCAGGCG CCTTCACCTA CTCGCCTCCT 
GTCACATCGG GCATCGGCAT TGGCATGTCA GCCATGAGCT CGACCTCTCG CTACCACACC 
TACCTGCCGC CGCCCTACCC AGGCTCCTCG CAGGCGCAGG CCGGGCCCTT CCAGACCGGC 
TCGCCCTCCT ACCACCTGTA CTACGGCACC TCGGCAGGCT CCTACCAATT CTCCATGGTG 
GGCGGCGAGC GATCACCCCC GCGCATCCTG CCGCCCTGCA CCAACGCGTC CACCGGAGCC 
GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG AGCGACGTGG TGGAAACCGA GGGCAGCCAT 
AGCAACTCGC CCACCAACAT GCCACCCGCG CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_008766821.2
CDS239..1441
Translation

Target ORF information:

RefSeq Version XM_008768599.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_008768599.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT 
GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC 
GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC 
GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC 
AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC 
ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG 
GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC 
CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC 
ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC 
AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAATGCCA GGCAGATCCA GCCGTCCCCA 
CCGTGGTCCT ATGACCAGTC TTACCAGTAC CTGGGGTCCA TCACCTCTTC TGTGCACCCG 
GCGACACCCA TTTCTCCCGG CCGAGCCAGT GGCATGACCA GCCTCTCAGC GGAACTTTCC 
AGTCGACTCT CAACAGCCCC GGACCTGACA GCCTTCGGCG ACCCGCGCCA GTTCCCCACG 
CTGCCGTCCA TCTCCGACCC GCGCATGCAC TACCCAGGCG CCTTCACCTA CTCGCCTCCT 
GTCACATCGG GCATCGGCAT TGGCATGTCA GCCATGAGCT CGACCTCTCG CTACCACACC 
TACCTGCCGC CGCCCTACCC AGGCTCCTCG CAGGCGCAGG CCGGGCCCTT CCAGACCGGC 
TCGCCCTCCT ACCACCTGTA CTACGGCACC TCGGCAGGCT CCTACCAATT CTCCATGGTG 
GGCGGCGAGC GATCACCCCC GCGCATCCTG CCGCCCTGCA CCAACGCGTC CACCGGAGCC 
GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG AGCGACGTGG TGGAAACCGA GGGCAGCCAT 
AGCAACTCGC CCACCAACAT GCCACCCGCG CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Sensory neuron differentiation potential of in utero mesenchymal stem cell transplantation in rat fetuses with spina bifida aperta.
Birth defects research. Part A, Clinical and molecular teratology103(9)772-9(2015 Sep)
Ma W,Wei X,Gu H,Li H,Guan K,Liu D,Chen L,Cao S,An D,Zhang H,Huang T,Miao J,Zhao G,Wu D,Liu B,Wang W,Yuan Z


book

Incoherent feed-forward regulatory loops control segregation of C-mechanoreceptors, nociceptors, and pruriceptors.
The Journal of neuroscience : the official journal of the Society for Neuroscience35(13)5317-29(2015 Apr)
Lou S,Pan X,Huang T,Duan B,Yang FC,Yang J,Xiong M,Liu Y,Ma Q


book

Transcription factor Runx1 inhibits proliferation and promotes developmental maturation in a selected population of inner olfactory nerve layer olfactory ensheathing cells.
Gene540(2)191-200(2014 May)
Murthy M,Bocking S,Verginelli F,Stifani S


book

Transcriptomics of post-stroke angiogenesis in the aged brain.
Frontiers in aging neuroscience644(2014)
Buga AM,Margaritescu C,Scholz CJ,Radu E,Zelenak C,Popa-Wagner A


book

Loss of Usp9x disrupts cortical architecture, hippocampal development and TGF?-mediated axonogenesis.
PloS one8(7)e68287(2013)
Stegeman S,Jolly LA,Premarathne S,Gecz J,Richards LJ,Mackay-Sim A,Wood SA