Gene Symbol
Runx1
Entrez Gene ID
50662
Full Name
runt-related transcription factor 1
Synonyms
Aml1,B,CBF-alpha-2,Cbfa2,PEA2-alpha,PEBP2-alpha
General protein information
Preferred Namesrunt-related transcription factor 1
Namesrunt-related transcription factor 1 PEA2-alpha B PEBP2-alpha B acute myeloid leukemia 1 protein core-binding factor runt domain alpha subunit 2 (acute myeloid leukemia 1 oncogene) core-binding factor subunit alpha-2 oncogene AML-1 polyomavirus enhancer-binding protein 2 alpha B subunit
Gene Type
protein-coding
Organism
Rattus norvegicus(Norway rat)
Genome
Chromosome: 11
Map Location: 11q11
Summary
putative transcription factor that may be involved in skeletal muscle gene regulation; human homolog is associated with a form of acute myeloid leukemia [RGD, Feb 2006].
mRNA and Protein(s)
mRNA
Protein
Name
XM_008768599.2
XP_008766821.2
runt-related transcription factor 1 isoform X3
XM_008768598.2
XP_008766820.2
runt-related transcription factor 1 isoform X2
XM_017598053.1
XP_017453542.1
runt-related transcription factor 1 isoform X1
NM_017325.2
NP_059021.1
runt-related transcription factor 1
Canis lupus familiaris (dog)
RUNX1
XP_849375.2
Rattus norvegicus (Norway rat)
Runx1
NP_059021.1
Pan troglodytes (chimpanzee)
RUNX1
XP_003949210.1
RUNX1
XP_002803189.1
Mus musculus (house mouse)
Runx1
NP_001104491.1
Homo sapiens (human)
RUNX1
NP_001745.2
Danio rerio (zebrafish)
runx1
NP_571678.1
Bos taurus (cattle)
RUNX1
NP_001243507.1
Xenopus tropicalis (tropical clawed frog)
runx1
XP_002939387.2
Related articles in PubMed
Sensory neuron differentiation potential of in utero mesenchymal stem cell transplantation in rat fetuses with spina bifida aperta.
Ma W, Wei X, Gu H, Li H, Guan K, Liu D, Chen L, Cao S, An D, Zhang H, Huang T, Miao J, Zhao G, Wu D, Liu B, Wang W, Yuan Z Birth defects research. Part A, Clinical and molecular teratology103(9)772-9(2015 Sep)
Incoherent feed-forward regulatory loops control segregation of C-mechanoreceptors, nociceptors, and pruriceptors.
Lou S, Pan X, Huang T, Duan B, Yang FC, Yang J, Xiong M, Liu Y, Ma Q The Journal of neuroscience : the official journal of the Society for Neuroscience35(13)5317-29(2015 Apr)
Transcription factor Runx1 inhibits proliferation and promotes developmental maturation in a selected population of inner olfactory nerve layer olfactory ensheathing cells.
Murthy M, Bocking S, Verginelli F, Stifani S Gene540(2)191-200(2014 May)
Transcriptomics of post-stroke angiogenesis in the aged brain.
Buga AM, Margaritescu C, Scholz CJ, Radu E, Zelenak C, Popa-Wagner A Frontiers in aging neuroscience644(2014)
Loss of Usp9x disrupts cortical architecture, hippocampal development and TGF?-mediated axonogenesis.
Stegeman S, Jolly LA, Premarathne S, Gecz J, Richards LJ, Mackay-Sim A, Wood SA PloS one8(7)e68287(2013)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Runx1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Runx1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
ORa43392
Clone ID Related Accession (Same CDS sequence)
NM_017325.2
Accession Version
NM_017325.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1353bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-12
Organism
Rattus norvegicus(Norway rat)
Product
runt-related transcription factor 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07033639.1 and AABR07033638.1. On Jun 11, 2015 this sequence version replaced NM_017325.1.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: L35271.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 ATGCGTATCC CCGTAGATGC CAGCACGAGC CGCCGCTTCA CGCCGCCTTC CACCGCGCTG AGCCCCGGCA AGATGAGCGA GGCGCTGCCG CTGGGCGCCC CGGATGGCGG CGCCGCCCTG GCCAGCAAGC TGAGGAGCGG CGACCGCAGC ATGGTGGAGG TACTAGCTGA CCACCCCGGC GAGCTAGTCC GCACCGACAG CCCCAACTTC CTCTGCTCCG TGCTGCCCAC TCACTGGCGC TGCAACAAGA CCCTGCCCAT CGCTTTCAAG GTGGTAGCGC TGGGCGACGT TCCGGATGGC ACTCTGGTCA CCGTCATGGC GGGCAATGAC GAAAACTACT CGGCGGAGCT GAGAAACGCC ACCGCGGCCA TGAAGAACCA AGTGGCGAGA TTCAACGACC TCAGGTTTGT CGGTCGGAGC GGCAGAGGCA AGAGCTTCAC TCTGACCATC ACCGTCTTTA CAAACCCCCC ACAAGTTGCC ACCTACCATA GAGCCATCAA AATCACAGTG GACGGCCCCC GAGAACCCCG AAGACATCGG CAGAAACTAG ATGATCAGAC CAAGCCCGGG AGTTTGTCCT TTTCCGAGCG GCTCAGTGAA CTGGAGCAGC TGCGGCGCAC GGCCATGAGG GTCAGCCCGC ATCACCCAGC CCCCACGCCC AACCCTCGGG CCTCCTTGAA CCACTCCACT GCCTTTAACC CTCAGCCTCA AAGTCAGATG CAGGATGCCA GGCAGATCCA GCCGTCCCCA CCGTGGTCCT ATGACCAGTC TTACCAGTAC CTGGGGTCCA TCACCTCTTC TGTGCACCCG GCGACACCCA TTTCTCCCGG CCGAGCCAGT GGCATGACCA GCCTCTCAGC GGAACTTTCC AGTCGACTCT CAACAGCCCC GGACCTGACA GCCTTCGGCG ACCCGCGCCA GTTCCCCACG CTGCCGTCCA TCTCCGACCC GCGCATGCAC TACCCAGGCG CCTTCACCTA CTCGCCTCCT GTCACATCGG GCATCGGCAT TGGCATGTCA GCCATGAGCT CGACCTCTCG CTACCACACC TACCTGCCGC CGCCCTACCC AGGCTCCTCG CAGGCGCAGG CCGGGCCCTT CCAGACCGGC TCGCCCTCCT ACCACCTGTA CTACGGCACC TCGGCAGGCT CCTACCAATT CTCCATGGTG GGCGGCGAGC GATCACCCCC GCGCATCCTG CCGCCCTGCA CCAACGCGTC CACCGGAGCC GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG AGCGACGTGG TGGAAACCGA GGGCAGCCAT AGCAACTCGC CCACCAACAT GCCACCCGCG CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_059021.1
CDS 400..1752
Translation
Target ORF information:
RefSeq Version NM_017325.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus RUNX family transcription factor 1 (Runx1), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_017325.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 ATGCGTATCC CCGTAGATGC CAGCACGAGC CGCCGCTTCA CGCCGCCTTC CACCGCGCTG AGCCCCGGCA AGATGAGCGA GGCGCTGCCG CTGGGCGCCC CGGATGGCGG CGCCGCCCTG GCCAGCAAGC TGAGGAGCGG CGACCGCAGC ATGGTGGAGG TACTAGCTGA CCACCCCGGC GAGCTAGTCC GCACCGACAG CCCCAACTTC CTCTGCTCCG TGCTGCCCAC TCACTGGCGC TGCAACAAGA CCCTGCCCAT CGCTTTCAAG GTGGTAGCGC TGGGCGACGT TCCGGATGGC ACTCTGGTCA CCGTCATGGC GGGCAATGAC GAAAACTACT CGGCGGAGCT GAGAAACGCC ACCGCGGCCA TGAAGAACCA AGTGGCGAGA TTCAACGACC TCAGGTTTGT CGGTCGGAGC GGCAGAGGCA AGAGCTTCAC TCTGACCATC ACCGTCTTTA CAAACCCCCC ACAAGTTGCC ACCTACCATA GAGCCATCAA AATCACAGTG GACGGCCCCC GAGAACCCCG AAGACATCGG CAGAAACTAG ATGATCAGAC CAAGCCCGGG AGTTTGTCCT TTTCCGAGCG GCTCAGTGAA CTGGAGCAGC TGCGGCGCAC GGCCATGAGG GTCAGCCCGC ATCACCCAGC CCCCACGCCC AACCCTCGGG CCTCCTTGAA CCACTCCACT GCCTTTAACC CTCAGCCTCA AAGTCAGATG CAGGATGCCA GGCAGATCCA GCCGTCCCCA CCGTGGTCCT ATGACCAGTC TTACCAGTAC CTGGGGTCCA TCACCTCTTC TGTGCACCCG GCGACACCCA TTTCTCCCGG CCGAGCCAGT GGCATGACCA GCCTCTCAGC GGAACTTTCC AGTCGACTCT CAACAGCCCC GGACCTGACA GCCTTCGGCG ACCCGCGCCA GTTCCCCACG CTGCCGTCCA TCTCCGACCC GCGCATGCAC TACCCAGGCG CCTTCACCTA CTCGCCTCCT GTCACATCGG GCATCGGCAT TGGCATGTCA GCCATGAGCT CGACCTCTCG CTACCACACC TACCTGCCGC CGCCCTACCC AGGCTCCTCG CAGGCGCAGG CCGGGCCCTT CCAGACCGGC TCGCCCTCCT ACCACCTGTA CTACGGCACC TCGGCAGGCT CCTACCAATT CTCCATGGTG GGCGGCGAGC GATCACCCCC GCGCATCCTG CCGCCCTGCA CCAACGCGTC CACCGGAGCC GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG AGCGACGTGG TGGAAACCGA GGGCAGCCAT AGCAACTCGC CCACCAACAT GCCACCCGCG CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa57705
Clone ID Related Accession (Same CDS sequence)
XM_017598053.1
Accession Version
XM_017598053.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1395bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
runt-related transcription factor 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA GCGGAACTTT CCAGTCGACT CTCAACAGCC CCGGACCTGA CAGCCTTCGG CGACCCGCGC CAGTTCCCCA CGCTGCCGTC CATCTCCGAC CCGCGCATGC ACTACCCAGG CGCCTTCACC TACTCGCCTC CTGTCACATC GGGCATCGGC ATTGGCATGT CAGCCATGAG CTCGACCTCT CGCTACCACA CCTACCTGCC GCCGCCCTAC CCAGGCTCCT CGCAGGCGCA GGCCGGGCCC TTCCAGACCG GCTCGCCCTC CTACCACCTG TACTACGGCA CCTCGGCAGG CTCCTACCAA TTCTCCATGG TGGGCGGCGA GCGATCACCC CCGCGCATCC TGCCGCCCTG CACCAACGCG TCCACCGGAG CCGCGCTGCT CAACCCCAGC CTCCCCAGCC AGAGCGACGT GGTGGAAACC GAGGGCAGCC ATAGCAACTC GCCCACCAAC ATGCCACCCG CGCGCCTGGA GGAGGCTGTC TGGCGGCCCT ACTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_017453542.1
CDS 239..1633
Translation
Target ORF information:
RefSeq Version XM_017598053.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_017598053.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA GCGGAACTTT CCAGTCGACT CTCAACAGCC CCGGACCTGA CAGCCTTCGG CGACCCGCGC CAGTTCCCCA CGCTGCCGTC CATCTCCGAC CCGCGCATGC ACTACCCAGG CGCCTTCACC TACTCGCCTC CTGTCACATC GGGCATCGGC ATTGGCATGT CAGCCATGAG CTCGACCTCT CGCTACCACA CCTACCTGCC GCCGCCCTAC CCAGGCTCCT CGCAGGCGCA GGCCGGGCCC TTCCAGACCG GCTCGCCCTC CTACCACCTG TACTACGGCA CCTCGGCAGG CTCCTACCAA TTCTCCATGG TGGGCGGCGA GCGATCACCC CCGCGCATCC TGCCGCCCTG CACCAACGCG TCCACCGGAG CCGCGCTGCT CAACCCCAGC CTCCCCAGCC AGAGCGACGT GGTGGAAACC GAGGGCAGCC ATAGCAACTC GCCCACCAAC ATGCCACCCG CGCGCCTGGA GGAGGCTGTC TGGCGGCCCT ACTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa57706
Clone ID Related Accession (Same CDS sequence)
XM_008768598.2
Accession Version
XM_008768598.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1392bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
runt-related transcription factor 1 isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_008768598.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA GCGGAACTTT CCAGTCGACT CTCAACCCCG GACCTGACAG CCTTCGGCGA CCCGCGCCAG TTCCCCACGC TGCCGTCCAT CTCCGACCCG CGCATGCACT ACCCAGGCGC CTTCACCTAC TCGCCTCCTG TCACATCGGG CATCGGCATT GGCATGTCAG CCATGAGCTC GACCTCTCGC TACCACACCT ACCTGCCGCC GCCCTACCCA GGCTCCTCGC AGGCGCAGGC CGGGCCCTTC CAGACCGGCT CGCCCTCCTA CCACCTGTAC TACGGCACCT CGGCAGGCTC CTACCAATTC TCCATGGTGG GCGGCGAGCG ATCACCCCCG CGCATCCTGC CGCCCTGCAC CAACGCGTCC ACCGGAGCCG CGCTGCTCAA CCCCAGCCTC CCCAGCCAGA GCGACGTGGT GGAAACCGAG GGCAGCCATA GCAACTCGCC CACCAACATG CCACCCGCGC GCCTGGAGGA GGCTGTCTGG CGGCCCTACT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_008766820.2
CDS 239..1630
Translation
Target ORF information:
RefSeq Version XM_008768598.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_008768598.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAGACATC GGCAGAAACT AGATGATCAG ACCAAGCCCG GGAGTTTGTC CTTTTCCGAG CGGCTCAGTG AACTGGAGCA GCTGCGGCGC ACGGCCATGA GGGTCAGCCC GCATCACCCA GCCCCCACGC CCAACCCTCG GGCCTCCTTG AACCACTCCA CTGCCTTTAA CCCTCAGCCT CAAAGTCAGA TGCAGGATGC CAGGCAGATC CAGCCGTCCC CACCGTGGTC CTATGACCAG TCTTACCAGT ACCTGGGGTC CATCACCTCT TCTGTGCACC CGGCGACACC CATTTCTCCC GGCCGAGCCA GTGGCATGAC CAGCCTCTCA GCGGAACTTT CCAGTCGACT CTCAACCCCG GACCTGACAG CCTTCGGCGA CCCGCGCCAG TTCCCCACGC TGCCGTCCAT CTCCGACCCG CGCATGCACT ACCCAGGCGC CTTCACCTAC TCGCCTCCTG TCACATCGGG CATCGGCATT GGCATGTCAG CCATGAGCTC GACCTCTCGC TACCACACCT ACCTGCCGCC GCCCTACCCA GGCTCCTCGC AGGCGCAGGC CGGGCCCTTC CAGACCGGCT CGCCCTCCTA CCACCTGTAC TACGGCACCT CGGCAGGCTC CTACCAATTC TCCATGGTGG GCGGCGAGCG ATCACCCCCG CGCATCCTGC CGCCCTGCAC CAACGCGTCC ACCGGAGCCG CGCTGCTCAA CCCCAGCCTC CCCAGCCAGA GCGACGTGGT GGAAACCGAG GGCAGCCATA GCAACTCGCC CACCAACATG CCACCCGCGC GCCTGGAGGA GGCTGTCTGG CGGCCCTACT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa57707
Clone ID Related Accession (Same CDS sequence)
XM_008768599.2
Accession Version
XM_008768599.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1203bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
runt-related transcription factor 1 isoform X3
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_008768599.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAATGCCA GGCAGATCCA GCCGTCCCCA CCGTGGTCCT ATGACCAGTC TTACCAGTAC CTGGGGTCCA TCACCTCTTC TGTGCACCCG GCGACACCCA TTTCTCCCGG CCGAGCCAGT GGCATGACCA GCCTCTCAGC GGAACTTTCC AGTCGACTCT CAACAGCCCC GGACCTGACA GCCTTCGGCG ACCCGCGCCA GTTCCCCACG CTGCCGTCCA TCTCCGACCC GCGCATGCAC TACCCAGGCG CCTTCACCTA CTCGCCTCCT GTCACATCGG GCATCGGCAT TGGCATGTCA GCCATGAGCT CGACCTCTCG CTACCACACC TACCTGCCGC CGCCCTACCC AGGCTCCTCG CAGGCGCAGG CCGGGCCCTT CCAGACCGGC TCGCCCTCCT ACCACCTGTA CTACGGCACC TCGGCAGGCT CCTACCAATT CTCCATGGTG GGCGGCGAGC GATCACCCCC GCGCATCCTG CCGCCCTGCA CCAACGCGTC CACCGGAGCC GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG AGCGACGTGG TGGAAACCGA GGGCAGCCAT AGCAACTCGC CCACCAACAT GCCACCCGCG CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_008766821.2
CDS 239..1441
Translation
Target ORF information:
RefSeq Version XM_008768599.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus runt-related transcription factor 1 (Runx1), transcript variant X3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_008768599.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 ATGGCTTCAG ACAGCATTTT TGAGTCATTT CCTTCATATC CACAGTGCTT CGTGAGAGAT GCCAGCACGA GCCGCCGCTT CACGCCGCCT TCCACCGCGC TGAGCCCCGG CAAGATGAGC GAGGCGCTGC CGCTGGGCGC CCCGGATGGC GGCGCCGCCC TGGCCAGCAA GCTGAGGAGC GGCGACCGCA GCATGGTGGA GGTACTAGCT GACCACCCCG GCGAGCTAGT CCGCACCGAC AGCCCCAACT TCCTCTGCTC CGTGCTGCCC ACTCACTGGC GCTGCAACAA GACCCTGCCC ATCGCTTTCA AGGTGGTAGC GCTGGGCGAC GTTCCGGATG GCACTCTGGT CACCGTCATG GCGGGCAATG ACGAAAACTA CTCGGCGGAG CTGAGAAACG CCACCGCGGC CATGAAGAAC CAAGTGGCGA GATTCAACGA CCTCAGGTTT GTCGGTCGGA GCGGCAGAGG CAAGAGCTTC ACTCTGACCA TCACCGTCTT TACAAACCCC CCACAAGTTG CCACCTACCA TAGAGCCATC AAAATCACAG TGGACGGCCC CCGAGAACCC CGAAATGCCA GGCAGATCCA GCCGTCCCCA CCGTGGTCCT ATGACCAGTC TTACCAGTAC CTGGGGTCCA TCACCTCTTC TGTGCACCCG GCGACACCCA TTTCTCCCGG CCGAGCCAGT GGCATGACCA GCCTCTCAGC GGAACTTTCC AGTCGACTCT CAACAGCCCC GGACCTGACA GCCTTCGGCG ACCCGCGCCA GTTCCCCACG CTGCCGTCCA TCTCCGACCC GCGCATGCAC TACCCAGGCG CCTTCACCTA CTCGCCTCCT GTCACATCGG GCATCGGCAT TGGCATGTCA GCCATGAGCT CGACCTCTCG CTACCACACC TACCTGCCGC CGCCCTACCC AGGCTCCTCG CAGGCGCAGG CCGGGCCCTT CCAGACCGGC TCGCCCTCCT ACCACCTGTA CTACGGCACC TCGGCAGGCT CCTACCAATT CTCCATGGTG GGCGGCGAGC GATCACCCCC GCGCATCCTG CCGCCCTGCA CCAACGCGTC CACCGGAGCC GCGCTGCTCA ACCCCAGCCT CCCCAGCCAG AGCGACGTGG TGGAAACCGA GGGCAGCCAT AGCAACTCGC CCACCAACAT GCCACCCGCG CGCCTGGAGG AGGCTGTCTG GCGGCCCTAC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
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