ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_25442 cDNA ORF clone

THAPS_25442 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_25442 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_25442 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

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OTf09086 XM_002295459.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $629.30
$899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_25442 ( XM_002295459.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295495.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09086
    Clone ID Related Accession (Same CDS sequence) XM_002295459.1
    Accession Version XM_002295459.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3177bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012081). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    ATGCCAATCA TCAAGGCTAA TCCTCATATT GTGGACTCTA TCTACTTCAC CAAAGATGGC 
    AAGCATTCTC CCATCATTAT TGGTGGTATT GTGATGAATA CCGATCCCAT CAAGACAATG 
    CAGACTTGGA CTGAGCTCCA TGTCGTTGTT CGTCTCCGTC TTCGGTGCAG GACGAGGCTA 
    ATGAATCGTC AGCTGAATCA CTCTATTGCC ATTGGCAATT CTGTGGCTGT CAACCTCTTT 
    CTTGGGCAAC CTTTCATCAA AGGTCTGGAG TGCATCTATC ATAGTCACTC CAACGCAGTG 
    ACTGCTCAGT TCGTCGAGAA AGTGAGGGTG GTCGCACTTG TCTTTGCATG GTACTTGACG 
    GGTGATTCAC GCAGATCCAA CGTATCTGTG CCTCCCAACG TCCATCTCGC CCATCATTAT 
    CGGCACCAAC TAACTAGCCA AGAGACCAGC GCTCCTACAA TGAAGAAGCT ATTCACCAGA 
    AAACGAAGCC AGCAGCGTGA ACAACAGCGC AAACAAGAAG AGAATATGCG CAATGAGATT 
    GATGTTCTGC ACGGTCGTAG CGCAACTTCC GATACAGCTG CCGCGTTGAC GTCAACGTCG 
    AGTGGAAGAG ATTCTAAATC GGCAGACCTC TCTCATGGAC TTGGAATTGC CTCGCTGGAC 
    ATCAATGGCT CTTCAATAAC AAATGCAGAG GCGCAGCAAC ATCATGAGCA TGATTTAATT 
    AACGACAATC TTAAGTCTGC CGAGGAGGAA TACTACGAGC GAGAAAATGG CCATGACGTA 
    GCAATAGGGG AGAAGAAGAA AAAGTCATCA CGAAAGCATC ACAAGAAGCA CAAACATCAT 
    TCCAAAGAGG GCAGGTCGTA TAGAGCACAC CGTAGTAGCC ATAGACGGGG AGATTGTCAC 
    GACAACGAGG AAGAAATAGC TGCAGCAGAA CGACGTTCAA GACGGCATAA ATCTCAGGAG 
    GAGGAGGATC GCAGGCCCAA AGAGCAGATT AGCGAGCAAA ACTGTGCTGC TGGAGACTTG 
    AGGAAGCGGG GGGATTATAA TGATGACGGC GAGCAACGAC AACGCATGAC AACCAAACCG 
    CACAAATACA ACAAAAAAAT CTCGTGTGAG CAAGAGGAAG AAAAGCAAGA AGAGCTCCCC 
    CACGAAGAAG TACAATCCTC TGATGACGAT GACGAACAAG AGAAGCAACG TCAAATCCAA 
    CAACAAAACC TAATAGACCT TCACATGGCA CAATACCTCC GAGCAAGTCG TCAAATTCCC 
    GGCAACTTCG ACCCATCCCA ACTAGACTAC AATTCCCAAG AAGAAAACGA CGACAACTCC 
    AACACCTCCT CCTCCAACAT CTTTGACGAA TACGATCCCA CCGCCCCCCT CTCTCAATTT 
    GAACAATCTG AACGCAAACG AAACATCATC CGTTCTCAAT CGTCTCGTTT CTCCGATACG 
    AAAATCAAGA TTAATGCATG GCATCAAAAG TATACGTTGA GGAAGGCGTT GGATTTGGCG 
    GAGAAGAGTC CGGAGATGGA GTGGTTGACT TCTTTTTATC GGTGTGATCC GAGGTGGCAG 
    ATTATGAAGT TTTTTGATGA GGTTGCTAGG GAGGGGGGTG AAGCCAAAGT GGACGAAGAT 
    CTGGGTGCTT CTCCCTTGGC TAGGTTGTTC AACAAGGCCA ATGTGTTTAC TGTCTGGAGA 
    CCTACATCAG AAGAGGCAAT CAAGAATATG ATGTTGGGTA TTGCTACGGG GAAAGGATTG 
    GATATCAAGG GAAAGTCGGC CAAGAAGGGT AACATCAGCT CGTACGTTCC ATTCATTCAG 
    ATATACGAAG AGCAGCACAA GGAACACGTC AGAGCTTACA TCAAAGATGG AAGAACAATC 
    CGCCTGTTTT ACCAAAGTGA ATCAAGCCGG GATGAAGCTC ATGAAATGAT ATTGGACGTC 
    AAAGACTTTA TGCTTTTCGC AGCAGAAGAT GCCATGCGAG TTTTGAGCGA CGAATATGCT 
    GATCCAGCCG AGCAGGAGTT GGCAATGAGG CACTTGATGT ACGATGACAC GAATCTCGGC 
    GTTACTGTGA TTGATACTTA TGCCGACTCA ACCCCCCCTG TGTTTGGTTT AGACATCACT 
    GAGAGGTTGT TTTGGGAAAG CTATGTTATG ATGCAAGATT GCTCGAGAAA GTCTGGCACG 
    GAATGGGATA TCGGCCGAGG ATCTGAGTTG GCATTCATGG ATATGAACTT TAAAGCAATT 
    CGCCATGAGC CTGGACCGGA TGAGCCACGC GCGGTGGTGT ATCAAATGAG CGACTCTTGC 
    CCAATGGAGC CCCGAACGTT GTTGATGGCA TACGAGGAAC ACAACAAAGT TAAGCCGGTA 
    GTTTCGGACT TTGACTGTTT CCTCCTTGGA TCACGAGGTG TGAAGTATGA ATATCCCATT 
    CCAGATGATC AAGTGGAGTT GGTAAAGTGG TCAGTGGACA ATATCAGAGA GGTACTTGAT 
    GAACGAGCAG CGTCCAACTC TAAGAAGGGG TGGATGGAGA CGTGGTTCAG CGTCTTGAAG 
    AAGGCTGCAA TGAAAGGATA TTATCCAAAG ACACCAAAGT ATGGTAACGG CGATCCAAAA 
    TCGTACCAGA TCATTGAGGT GGCAGTTAGT CGCCTACAGG AGAGTGGGTG TGTTCGGCAC 
    GGTGCAGAGT GTTTCAACTG GTTCTTCCCG CAGGAAATTG ATGACAAACT ACTTGTCATT 
    TCGGATACAT TGCCTGGTAA TGTCAAGTGG AAGCGAGTCG ATGTGCAAGA GCTACAATCC 
    ATCCTTTGCG ACAAAATTGA TGAAGGTTTT ACGTTTGCTC TCAATCCGAA GTGGGTACTG 
    TGTGATCCTG GATGGAGGAG AGTATACGAC AAACTAATGG GAAGCAATAA GCCAAACGTC 
    CAAGATTCAA TCAATTGTTG GCTGCCACCT GAGACTGGAC TACGCCAACA AATTGACGAG 
    ATTTCAGCGC GCCATCCTCA TGGATTTGGA GGCCTCGAGG GAGCACGAGA GGAGACAGAG 
    GGTACTGAGG TCATGGATAC GATGGAAGAT CAACTGCAAC GCTACATGGT GAGGCAACGA 
    GCATGGAGAA AGCTGAGGTT GGCATTGTAT TGGATAAGGT TTGTGAGAGA GAAGAGAGCA 
    GCAATGGCTG AGGAAGAGGC AAGTGCCGCG GCAGGGTTGA AAGAAGAGGA ATCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295495.1
    CDS1..3177
    Translation

    Target ORF information:

    RefSeq Version XM_002295459.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295459.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    ATGCCAATCA TCAAGGCTAA TCCTCATATT GTGGACTCTA TCTACTTCAC CAAAGATGGC 
    AAGCATTCTC CCATCATTAT TGGTGGTATT GTGATGAATA CCGATCCCAT CAAGACAATG 
    CAGACTTGGA CTGAGCTCCA TGTCGTTGTT CGTCTCCGTC TTCGGTGCAG GACGAGGCTA 
    ATGAATCGTC AGCTGAATCA CTCTATTGCC ATTGGCAATT CTGTGGCTGT CAACCTCTTT 
    CTTGGGCAAC CTTTCATCAA AGGTCTGGAG TGCATCTATC ATAGTCACTC CAACGCAGTG 
    ACTGCTCAGT TCGTCGAGAA AGTGAGGGTG GTCGCACTTG TCTTTGCATG GTACTTGACG 
    GGTGATTCAC GCAGATCCAA CGTATCTGTG CCTCCCAACG TCCATCTCGC CCATCATTAT 
    CGGCACCAAC TAACTAGCCA AGAGACCAGC GCTCCTACAA TGAAGAAGCT ATTCACCAGA 
    AAACGAAGCC AGCAGCGTGA ACAACAGCGC AAACAAGAAG AGAATATGCG CAATGAGATT 
    GATGTTCTGC ACGGTCGTAG CGCAACTTCC GATACAGCTG CCGCGTTGAC GTCAACGTCG 
    AGTGGAAGAG ATTCTAAATC GGCAGACCTC TCTCATGGAC TTGGAATTGC CTCGCTGGAC 
    ATCAATGGCT CTTCAATAAC AAATGCAGAG GCGCAGCAAC ATCATGAGCA TGATTTAATT 
    AACGACAATC TTAAGTCTGC CGAGGAGGAA TACTACGAGC GAGAAAATGG CCATGACGTA 
    GCAATAGGGG AGAAGAAGAA AAAGTCATCA CGAAAGCATC ACAAGAAGCA CAAACATCAT 
    TCCAAAGAGG GCAGGTCGTA TAGAGCACAC CGTAGTAGCC ATAGACGGGG AGATTGTCAC 
    GACAACGAGG AAGAAATAGC TGCAGCAGAA CGACGTTCAA GACGGCATAA ATCTCAGGAG 
    GAGGAGGATC GCAGGCCCAA AGAGCAGATT AGCGAGCAAA ACTGTGCTGC TGGAGACTTG 
    AGGAAGCGGG GGGATTATAA TGATGACGGC GAGCAACGAC AACGCATGAC AACCAAACCG 
    CACAAATACA ACAAAAAAAT CTCGTGTGAG CAAGAGGAAG AAAAGCAAGA AGAGCTCCCC 
    CACGAAGAAG TACAATCCTC TGATGACGAT GACGAACAAG AGAAGCAACG TCAAATCCAA 
    CAACAAAACC TAATAGACCT TCACATGGCA CAATACCTCC GAGCAAGTCG TCAAATTCCC 
    GGCAACTTCG ACCCATCCCA ACTAGACTAC AATTCCCAAG AAGAAAACGA CGACAACTCC 
    AACACCTCCT CCTCCAACAT CTTTGACGAA TACGATCCCA CCGCCCCCCT CTCTCAATTT 
    GAACAATCTG AACGCAAACG AAACATCATC CGTTCTCAAT CGTCTCGTTT CTCCGATACG 
    AAAATCAAGA TTAATGCATG GCATCAAAAG TATACGTTGA GGAAGGCGTT GGATTTGGCG 
    GAGAAGAGTC CGGAGATGGA GTGGTTGACT TCTTTTTATC GGTGTGATCC GAGGTGGCAG 
    ATTATGAAGT TTTTTGATGA GGTTGCTAGG GAGGGGGGTG AAGCCAAAGT GGACGAAGAT 
    CTGGGTGCTT CTCCCTTGGC TAGGTTGTTC AACAAGGCCA ATGTGTTTAC TGTCTGGAGA 
    CCTACATCAG AAGAGGCAAT CAAGAATATG ATGTTGGGTA TTGCTACGGG GAAAGGATTG 
    GATATCAAGG GAAAGTCGGC CAAGAAGGGT AACATCAGCT CGTACGTTCC ATTCATTCAG 
    ATATACGAAG AGCAGCACAA GGAACACGTC AGAGCTTACA TCAAAGATGG AAGAACAATC 
    CGCCTGTTTT ACCAAAGTGA ATCAAGCCGG GATGAAGCTC ATGAAATGAT ATTGGACGTC 
    AAAGACTTTA TGCTTTTCGC AGCAGAAGAT GCCATGCGAG TTTTGAGCGA CGAATATGCT 
    GATCCAGCCG AGCAGGAGTT GGCAATGAGG CACTTGATGT ACGATGACAC GAATCTCGGC 
    GTTACTGTGA TTGATACTTA TGCCGACTCA ACCCCCCCTG TGTTTGGTTT AGACATCACT 
    GAGAGGTTGT TTTGGGAAAG CTATGTTATG ATGCAAGATT GCTCGAGAAA GTCTGGCACG 
    GAATGGGATA TCGGCCGAGG ATCTGAGTTG GCATTCATGG ATATGAACTT TAAAGCAATT 
    CGCCATGAGC CTGGACCGGA TGAGCCACGC GCGGTGGTGT ATCAAATGAG CGACTCTTGC 
    CCAATGGAGC CCCGAACGTT GTTGATGGCA TACGAGGAAC ACAACAAAGT TAAGCCGGTA 
    GTTTCGGACT TTGACTGTTT CCTCCTTGGA TCACGAGGTG TGAAGTATGA ATATCCCATT 
    CCAGATGATC AAGTGGAGTT GGTAAAGTGG TCAGTGGACA ATATCAGAGA GGTACTTGAT 
    GAACGAGCAG CGTCCAACTC TAAGAAGGGG TGGATGGAGA CGTGGTTCAG CGTCTTGAAG 
    AAGGCTGCAA TGAAAGGATA TTATCCAAAG ACACCAAAGT ATGGTAACGG CGATCCAAAA 
    TCGTACCAGA TCATTGAGGT GGCAGTTAGT CGCCTACAGG AGAGTGGGTG TGTTCGGCAC 
    GGTGCAGAGT GTTTCAACTG GTTCTTCCCG CAGGAAATTG ATGACAAACT ACTTGTCATT 
    TCGGATACAT TGCCTGGTAA TGTCAAGTGG AAGCGAGTCG ATGTGCAAGA GCTACAATCC 
    ATCCTTTGCG ACAAAATTGA TGAAGGTTTT ACGTTTGCTC TCAATCCGAA GTGGGTACTG 
    TGTGATCCTG GATGGAGGAG AGTATACGAC AAACTAATGG GAAGCAATAA GCCAAACGTC 
    CAAGATTCAA TCAATTGTTG GCTGCCACCT GAGACTGGAC TACGCCAACA AATTGACGAG 
    ATTTCAGCGC GCCATCCTCA TGGATTTGGA GGCCTCGAGG GAGCACGAGA GGAGACAGAG 
    GGTACTGAGG TCATGGATAC GATGGAAGAT CAACTGCAAC GCTACATGGT GAGGCAACGA 
    GCATGGAGAA AGCTGAGGTT GGCATTGTAT TGGATAAGGT TTGTGAGAGA GAAGAGAGCA 
    GCAATGGCTG AGGAAGAGGC AAGTGCCGCG GCAGGGTTGA AAGAAGAGGA ATCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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