ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_25319 cDNA ORF clone

THAPS_25319 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_25319 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_25319 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

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OTf09094 XM_002295323.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $510.30
$729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_25319 ( XM_002295323.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295359.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09094
    Clone ID Related Accession (Same CDS sequence) XM_002295323.1
    Accession Version XM_002295323.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2565bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012081). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTTCCCTG CAAAAAACAA CGTGGTGAAA ACCAGAGAAT CTCGTGGGAC CACACTTCTC 
    TCTCGCAGTC ACCACCAGCA GCTGCAGTCC ACTTTGAGTT TCCAGCAGTC TGTCACCAAG 
    CACCACGCCA TCCACGCTCC CTCCTCAACT CACAAACGAC ACCCACAAAT ATTTCATGTC 
    ATCACACTAA TCAGTCACCA TATCGCCTAC AGCGGCCATT CATCATCACC GCTTCGACAT 
    TCCTCCAACG GCCGTACAGC GTGTGCAGTA GCGGTAGATT CATCATTCGT CGGTCTCAAT 
    TTCGGAACGC TTCGCCTCAT CGGTGCACCA AAAGTTAGGG CCTCACCCTA CTATCCCACG 
    ATGGAGCCGT GTCAGCCAGT GGATCAAATA ACACACCCTC AGAATGACAG CGCGGTGTTT 
    GACGGAGTGG AGGTTCCTTT TCCTGAATTA TTGAACAACA ACAACGACGA CGACGGCGTG 
    GAACGTCAGC TCAATCGCCA CGCTGACAAC CGACGCCGTC ACGACGACGT CATGAACAAC 
    CACAACATTC TCCTGCACAA CCTCCTGCAA CCAATGCAGC AACAGCCAAC AGACTCGGAA 
    CACAGCGAAA CAAGCGACGA GCAACGCAGT GCCGAGAGGG CTGTGGCTCG TGCTGCTGCG 
    GCAATGGCTG GTGAGGGCAG CAGTAGCGGT GGCAGCGACA ACGGTGGTGG TGAGATGAGG 
    GGAGTGCAGC ATCATCGTGC AGCTGCTGCT GATAATGGTG GATCGGGAGG ATCCACTGAC 
    GACGGGGGGA GATCACGGAG CACTCTTTCC ACGAGGAGTG ATATTTCCAG CATCAACGAC 
    AGCAACAACA ACGACAATTC AGAGGCATCG ACTTTCACGG GAAGATCTTC ATCGGAGGAT 
    GATTGCGTCA GGCAGAAGTT GGAACGGCAG CAGCTCGAGT CTTCCTCTTC GTCTTCCTCC 
    ATCTACGGTA TAGAACAGCA GCAGCAACAA CAACAACAAC AACAGCAAGC GGATTATGCC 
    TATTCTCCTC CTTCCAATCA GTCATCTCCT TCTCCACCAG CATCATCCGA CGACGGCCAC 
    CAACAGCAGC AGCAGTCGCC ACGAGCAGCC TCACCGCCCC GTCGTATCAC CTACCTAGAC 
    GAAATGTCCA CCCTTGACTC TACTTTATGT CAATTATCCA ATCCTGCTGT GGAAATCAAG 
    ATTATTTTGG AAAGGTTGAT TAATGAGTTA CGAGAGGCTA GATTGAAACG AAGGGAGGCG 
    GAGAGGGAGG AGGAGGGTGC TGTCATTGAT CAACCACCAA AGCCAAAGCA GCAACTGATG 
    AGGAAGGAGG AGGGGCAGCT TAGAAGAAGT AGCGCCCGAG AAAAAGAACA AGAAAGTATT 
    GATGGCAGTT GTGGTAGTGG GAGCAGGGGG AGTAAACGAT CTCGTACGGG GGAGGCTTCC 
    TATGTGGATA CTTTGCAAGT TGCTGCTACT GAGGCAGATG ATAGCAAACT GCAGCAACAC 
    CAACAGCCGA TTCAAATCAT TATGAAGTGG ATGGATTCGT TTCAGGAGGA TGAGCACATT 
    CAGCTAATCT GCCTCCAAGC CCTACCAACC ATCCTCGAAG ATCCACCAAC CCGTCTCATC 
    GCCCAATCCG ACGGTCTTGC CTCCATCGTC CTCTACAACA TGGCCGCCTT CCCTTCCAGC 
    TCGTTGCTAC AACTGACTGC CTTTCACACG TTAGTAGTGT TGCTAAGACC ACTGGGTGCC 
    AATGAGGGAA TGGTGCACAA GGCTCATGTG CACACGAACA AGAGTGCCAG GGGAATCCGT 
    AGTATTAATC ACGTTACCAA GAGCAACTCC CACTATGTTG ATACATCCTC TGTGATTTCC 
    AAAACTACCC TCAACGATGC ATCTTACGAA CCACGCTGGG AAGAAAACGG AGTGCGGGTA 
    ATGCTAGACT CTCTCCGTCG TTATTCTAAC GATCGGTACC TCCAAGCCAT GGGATGTTGG 
    GCAATGGTTA ATGCGGCGTT GTACTCCTCG TTGAAGGCGA GTTTGTTGAG GTTGGGGGGT 
    GTTTATGCTT GTACGAATGC AATGATGTTG CATCCGAATG TGGAGGCTGT ACAGTTTAGA 
    GGACTGTTTG CGTTGATCAA TCTGGTTATT CCTGACAACA CGAACAAAAA CGGCGACGGA 
    TCCTCCATCC ATACCCACGT ATACCAAATC GCACGCCTCA CTATCCTCGC TATGAAGAAC 
    TTTCATACCA ACAAGTCCAT CCTTAACCGT GGATGTCTCG TTCTTCGCAA TCTCTCCTTA 
    ACTCCGGCAT TTGTCAAGAT CTTGGCGCGA ACTCCAGGAT GTGTAGATAT TCTGTTGCAT 
    TGTAGGCAGA TGTGTCCACG GGATGTGTTG GTCCAGAGGA GTGCTAGGAC AATTATGATT 
    TTGATCCAGA GAGATACTGC TAGCGTGGGA AGCGGTGGCA GTGGAGGGGG AGGAGGAGGA 
    TTTGGGGTTG CTTCGGCTAC AGCAGCAGTG TCTTCGGCGG CAGCAGCCGG TGTTGCTTCG 
    GCTGCACATT CGACACCTGC AACGGAGGAA AGCGGCAAAT TTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295359.1
    CDS1..2565
    Translation

    Target ORF information:

    RefSeq Version XM_002295323.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295323.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTTCCCTG CAAAAAACAA CGTGGTGAAA ACCAGAGAAT CTCGTGGGAC CACACTTCTC 
    TCTCGCAGTC ACCACCAGCA GCTGCAGTCC ACTTTGAGTT TCCAGCAGTC TGTCACCAAG 
    CACCACGCCA TCCACGCTCC CTCCTCAACT CACAAACGAC ACCCACAAAT ATTTCATGTC 
    ATCACACTAA TCAGTCACCA TATCGCCTAC AGCGGCCATT CATCATCACC GCTTCGACAT 
    TCCTCCAACG GCCGTACAGC GTGTGCAGTA GCGGTAGATT CATCATTCGT CGGTCTCAAT 
    TTCGGAACGC TTCGCCTCAT CGGTGCACCA AAAGTTAGGG CCTCACCCTA CTATCCCACG 
    ATGGAGCCGT GTCAGCCAGT GGATCAAATA ACACACCCTC AGAATGACAG CGCGGTGTTT 
    GACGGAGTGG AGGTTCCTTT TCCTGAATTA TTGAACAACA ACAACGACGA CGACGGCGTG 
    GAACGTCAGC TCAATCGCCA CGCTGACAAC CGACGCCGTC ACGACGACGT CATGAACAAC 
    CACAACATTC TCCTGCACAA CCTCCTGCAA CCAATGCAGC AACAGCCAAC AGACTCGGAA 
    CACAGCGAAA CAAGCGACGA GCAACGCAGT GCCGAGAGGG CTGTGGCTCG TGCTGCTGCG 
    GCAATGGCTG GTGAGGGCAG CAGTAGCGGT GGCAGCGACA ACGGTGGTGG TGAGATGAGG 
    GGAGTGCAGC ATCATCGTGC AGCTGCTGCT GATAATGGTG GATCGGGAGG ATCCACTGAC 
    GACGGGGGGA GATCACGGAG CACTCTTTCC ACGAGGAGTG ATATTTCCAG CATCAACGAC 
    AGCAACAACA ACGACAATTC AGAGGCATCG ACTTTCACGG GAAGATCTTC ATCGGAGGAT 
    GATTGCGTCA GGCAGAAGTT GGAACGGCAG CAGCTCGAGT CTTCCTCTTC GTCTTCCTCC 
    ATCTACGGTA TAGAACAGCA GCAGCAACAA CAACAACAAC AACAGCAAGC GGATTATGCC 
    TATTCTCCTC CTTCCAATCA GTCATCTCCT TCTCCACCAG CATCATCCGA CGACGGCCAC 
    CAACAGCAGC AGCAGTCGCC ACGAGCAGCC TCACCGCCCC GTCGTATCAC CTACCTAGAC 
    GAAATGTCCA CCCTTGACTC TACTTTATGT CAATTATCCA ATCCTGCTGT GGAAATCAAG 
    ATTATTTTGG AAAGGTTGAT TAATGAGTTA CGAGAGGCTA GATTGAAACG AAGGGAGGCG 
    GAGAGGGAGG AGGAGGGTGC TGTCATTGAT CAACCACCAA AGCCAAAGCA GCAACTGATG 
    AGGAAGGAGG AGGGGCAGCT TAGAAGAAGT AGCGCCCGAG AAAAAGAACA AGAAAGTATT 
    GATGGCAGTT GTGGTAGTGG GAGCAGGGGG AGTAAACGAT CTCGTACGGG GGAGGCTTCC 
    TATGTGGATA CTTTGCAAGT TGCTGCTACT GAGGCAGATG ATAGCAAACT GCAGCAACAC 
    CAACAGCCGA TTCAAATCAT TATGAAGTGG ATGGATTCGT TTCAGGAGGA TGAGCACATT 
    CAGCTAATCT GCCTCCAAGC CCTACCAACC ATCCTCGAAG ATCCACCAAC CCGTCTCATC 
    GCCCAATCCG ACGGTCTTGC CTCCATCGTC CTCTACAACA TGGCCGCCTT CCCTTCCAGC 
    TCGTTGCTAC AACTGACTGC CTTTCACACG TTAGTAGTGT TGCTAAGACC ACTGGGTGCC 
    AATGAGGGAA TGGTGCACAA GGCTCATGTG CACACGAACA AGAGTGCCAG GGGAATCCGT 
    AGTATTAATC ACGTTACCAA GAGCAACTCC CACTATGTTG ATACATCCTC TGTGATTTCC 
    AAAACTACCC TCAACGATGC ATCTTACGAA CCACGCTGGG AAGAAAACGG AGTGCGGGTA 
    ATGCTAGACT CTCTCCGTCG TTATTCTAAC GATCGGTACC TCCAAGCCAT GGGATGTTGG 
    GCAATGGTTA ATGCGGCGTT GTACTCCTCG TTGAAGGCGA GTTTGTTGAG GTTGGGGGGT 
    GTTTATGCTT GTACGAATGC AATGATGTTG CATCCGAATG TGGAGGCTGT ACAGTTTAGA 
    GGACTGTTTG CGTTGATCAA TCTGGTTATT CCTGACAACA CGAACAAAAA CGGCGACGGA 
    TCCTCCATCC ATACCCACGT ATACCAAATC GCACGCCTCA CTATCCTCGC TATGAAGAAC 
    TTTCATACCA ACAAGTCCAT CCTTAACCGT GGATGTCTCG TTCTTCGCAA TCTCTCCTTA 
    ACTCCGGCAT TTGTCAAGAT CTTGGCGCGA ACTCCAGGAT GTGTAGATAT TCTGTTGCAT 
    TGTAGGCAGA TGTGTCCACG GGATGTGTTG GTCCAGAGGA GTGCTAGGAC AATTATGATT 
    TTGATCCAGA GAGATACTGC TAGCGTGGGA AGCGGTGGCA GTGGAGGGGG AGGAGGAGGA 
    TTTGGGGTTG CTTCGGCTAC AGCAGCAGTG TCTTCGGCGG CAGCAGCCGG TGTTGCTTCG 
    GCTGCACATT CGACACCTGC AACGGAGGAA AGCGGCAAAT TTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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