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nup43 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol nup43
Entrez Gene ID 548898
Full Name nucleoporin 43kDa
General protein information
Preferred Names

nucleoporin 43kDa

Names

nucleoporin Nup43
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001016144.2 NP_001016144.1 nucleoporin Nup43
XM_012962968.2 XP_012818422.1 nucleoporin Nup43 isoform X1

Pathways from BioSystems


Homologies


Bos taurus (cattle) NUP43 NP_001096566.1
Mus musculus (house mouse) Nup43 NP_663752.2
Rattus norvegicus (Norway rat) Nup43 NP_001121663.1
Pan troglodytes (chimpanzee) NUP43 XP_527530.3
Gallus gallus (chicken) NUP43 XP_419667.2
Danio rerio (zebrafish) nup43 NP_998057.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP000480 XP_310612.5
Xenopus tropicalis (tropical clawed frog) nup43 NP_001016144.1
Homo sapiens (human) NUP43 NP_942590.1
NUP43 XP_002803908.1
Canis lupus familiaris (dog) NUP43 XP_541148.2
Drosophila melanogaster (fruit fly) Nup43 NP_650716.2

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following nup43 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the nup43 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa22071 NM_001016144.2
Latest version!		 Xenopus tropicalis nucleoporin 43kDa (nup43), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
OXa27575 XM_012962968.2
Latest version!		 Xenopus tropicalis nucleoporin 43kDa (nup43), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa22071
Clone ID Related Accession (Same CDS sequence) NM_001016144.2
Accession Version NM_001016144.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1128bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-21
Organism Xenopus tropicalis(tropical clawed frog)
Product nucleoporin Nup43
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR762004.2. On Oct 14, 2005 this sequence version replaced NM_001016144.1. ##Evidence-Data-START## Transcript exon combination :: CR762004.2, BC171085.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGACGATA AATTCGCTGC AAAATTTGTC TCTCACAAAA TTAGCAGAAC TCGCTGGCGC 
CCAGTGTCGG CCTCGTCGCT GCAGCAACCG GATGTGTTTG CTACGGGTTC CTGGGATAAT 
GAGGAAAACA AGGTATGTGT GTGGGCCACT TCAGACTTTG GGGCCATAAG TCTAGAAGAA 
GAATACCAAG GAGATCCTAA ACAACTGTGT GACATCAGAC ACATTGGCGA TGTTATGGAC 
ATGCAGTTTT TAGATCAGGA GAGGATTGTA ACTGCCTCAT CCACAGGAAC TGTAACAATC 
TTTCGCCATC ATGAGAACAA TCAGACTTTA TCAGTAAACC AAAAGTGGGA ACAGGCACAT 
TATCATGTTG GATCAAACAT GAGAGCTCCT TGCACTGGCA TTGTATGTAG CAGTCCCGAA 
ATCGTTTCTG TTGGGGAGGA CGGCCGAATA AACTGTTTCC GTGCTGAGAG CAGAGATGTT 
GTGAGAACAA TAGATGATGC AGACAGCAGT ACTATGCATG GAGTAACATT TCTTCGGACA 
ACAGAGATAC TGACTGTGAA TTCAGTAGGC CAACTAAAGT TGTGGGATTT GAGAAAGCAA 
GGCAATGATC CTACCCAGAT CTTCTCTGTA ACTGGTGAAA GAGTTCCTCT GCATTGTGTC 
GACCGTCATC CTAACCAACA GCATGTTGTG GCAACAGGGG GACAGGATGG CATGCTGTGC 
ATCTGGGATG TCAGACATGG CAAAATGCCA ATGTCTCTGC TTAATGCTCA TAAAGCAGAA 
ATGTGGGAAG TACATTTCCA TCCGTCAAAC CCTGATCATT TGTTTACTTG CTCTGAGGAT 
GGCTCTTTGT GGCACTGGGA TGCATCAGCT GACACTGAAA AGCCTACCTT TATCATTGGG 
GGAAGGAGCA CCTTTAACAT TTCACGTAGC AGTATAGCCC ATACTAATGC TAATCAGTCC 
CTGGCTTGTG TTTGGCTTAG TACAGACCCT ACTAAAGGCC ATCTAGAAAT CACCAACCTC 
TTGCCAAGCT CAACACTGTC TGTGAATAGT TTGGATGTTT TAGGGCAAAA CCTTGTCTGT 
GGAACTGATG CAGAAGCAAT TTATGTTACC AGAAGACTCT TTTCATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001016144.1
CDS32..1159
Translation

Target ORF information:

RefSeq Version NM_001016144.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis nucleoporin 43kDa (nup43), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001016144.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGACGATA AATTCGCTGC AAAATTTGTC TCTCACAAAA TTAGCAGAAC TCGCTGGCGC 
CCAGTGTCGG CCTCGTCGCT GCAGCAACCG GATGTGTTTG CTACGGGTTC CTGGGATAAT 
GAGGAAAACA AGGTATGTGT GTGGGCCACT TCAGACTTTG GGGCCATAAG TCTAGAAGAA 
GAATACCAAG GAGATCCTAA ACAACTGTGT GACATCAGAC ACATTGGCGA TGTTATGGAC 
ATGCAGTTTT TAGATCAGGA GAGGATTGTA ACTGCCTCAT CCACAGGAAC TGTAACAATC 
TTTCGCCATC ATGAGAACAA TCAGACTTTA TCAGTAAACC AAAAGTGGGA ACAGGCACAT 
TATCATGTTG GATCAAACAT GAGAGCTCCT TGCACTGGCA TTGTATGTAG CAGTCCCGAA 
ATCGTTTCTG TTGGGGAGGA CGGCCGAATA AACTGTTTCC GTGCTGAGAG CAGAGATGTT 
GTGAGAACAA TAGATGATGC AGACAGCAGT ACTATGCATG GAGTAACATT TCTTCGGACA 
ACAGAGATAC TGACTGTGAA TTCAGTAGGC CAACTAAAGT TGTGGGATTT GAGAAAGCAA 
GGCAATGATC CTACCCAGAT CTTCTCTGTA ACTGGTGAAA GAGTTCCTCT GCATTGTGTC 
GACCGTCATC CTAACCAACA GCATGTTGTG GCAACAGGGG GACAGGATGG CATGCTGTGC 
ATCTGGGATG TCAGACATGG CAAAATGCCA ATGTCTCTGC TTAATGCTCA TAAAGCAGAA 
ATGTGGGAAG TACATTTCCA TCCGTCAAAC CCTGATCATT TGTTTACTTG CTCTGAGGAT 
GGCTCTTTGT GGCACTGGGA TGCATCAGCT GACACTGAAA AGCCTACCTT TATCATTGGG 
GGAAGGAGCA CCTTTAACAT TTCACGTAGC AGTATAGCCC ATACTAATGC TAATCAGTCC 
CTGGCTTGTG TTTGGCTTAG TACAGACCCT ACTAAAGGCC ATCTAGAAAT CACCAACCTC 
TTGCCAAGCT CAACACTGTC TGTGAATAGT TTGGATGTTT TAGGGCAAAA CCTTGTCTGT 
GGAACTGATG CAGAAGCAAT TTATGTTACC AGAAGACTCT TTTCATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa27575
Clone ID Related Accession (Same CDS sequence) XM_012962968.2
Accession Version XM_012962968.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1002bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product nucleoporin Nup43 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012962968.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGACGATA AATTCGCTGC AAAATTTGTC TCTCACAAAA TTAGCAGAAC TCGCTGGCGC 
CCAGTGTCGG CCTCGTCGCT GCAGCAACCG GATGTGTTTG CTACGGGTTC CTGGGATAAT 
GAGGAAAACA AGGTATGTGT GTGGGCCACT TCAGACTTTG GGGCCATAAG TCTAGAAGAA 
GAATACCAAG GAGATCCTAA ACAACTGTGT GACATCAGAC ACATTGGCGA TGTTATGGAC 
ATGCAGTTTT TAGATCAGGA GAGGATTGTA ACTGCCTCAT CCACAGGAAC TGTAACAATC 
TTTCGCCATC ATGAGAACAA TCAGACTTTA TCAGTAAACC AAAAGTGGGA ACAGGCACAT 
TATCATGTTG GATCAAACAT GAGAGCTCCT TGCACTGGCA TTGTATGTAG CAGTCCCGAA 
ATCGTTTCTG TTGGGGAGGA CGGCCGAATA AACTGTTTCC GTGCTGAGAG CAGAGATGTT 
GTGAGAACAA TAGATGATGC AGACAGCAGT ACTATGCATG GAGTAACATT TCTTCGTACA 
ACAGAGATAC TGACTGTGAA TTCAGTAGGC CAACTAAAGT TGTGGGATTT GAGAAAGCAA 
GGCAATGATC CTACCCAGAT CTTCTCTGTA ACTGGTGAAA GAGTTCCTCT GCATTGTGTC 
GACCGTCATC CTAACCAACA GCATGTTGTG GCAACAGGGG GACAGGATGG CATGCTGTGC 
ATCTGGGATG TCAGACATGG CAAAATGCCA ATGTCTCTGC TTAATGCTCA TAAAGCAGAA 
AAAGCTGAAA TGACAGAAAT GACAGTTCAT ATGGGGTATG TTCACATTGG GGCCCCTACA 
TGCCAGTGTG GGAAGTACAT TTCCATCCGT CAAACCCTGA TCATTTGTTT ACTTGCTCTG 
AGGATGGCTC TTTGTGGCAC TGGGATGCAT CAGCTGACAC TGAAAAGCCT ACCTTTCTCA 
TTGGGGGAAG GAGCACCTTT AACATTTCAC GTAGCAGTAT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012818422.1
CDS294..1295
Translation

Target ORF information:

RefSeq Version XM_012962968.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis nucleoporin 43kDa (nup43), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012962968.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGACGATA AATTCGCTGC AAAATTTGTC TCTCACAAAA TTAGCAGAAC TCGCTGGCGC 
CCAGTGTCGG CCTCGTCGCT GCAGCAACCG GATGTGTTTG CTACGGGTTC CTGGGATAAT 
GAGGAAAACA AGGTATGTGT GTGGGCCACT TCAGACTTTG GGGCCATAAG TCTAGAAGAA 
GAATACCAAG GAGATCCTAA ACAACTGTGT GACATCAGAC ACATTGGCGA TGTTATGGAC 
ATGCAGTTTT TAGATCAGGA GAGGATTGTA ACTGCCTCAT CCACAGGAAC TGTAACAATC 
TTTCGCCATC ATGAGAACAA TCAGACTTTA TCAGTAAACC AAAAGTGGGA ACAGGCACAT 
TATCATGTTG GATCAAACAT GAGAGCTCCT TGCACTGGCA TTGTATGTAG CAGTCCCGAA 
ATCGTTTCTG TTGGGGAGGA CGGCCGAATA AACTGTTTCC GTGCTGAGAG CAGAGATGTT 
GTGAGAACAA TAGATGATGC AGACAGCAGT ACTATGCATG GAGTAACATT TCTTCGTACA 
ACAGAGATAC TGACTGTGAA TTCAGTAGGC CAACTAAAGT TGTGGGATTT GAGAAAGCAA 
GGCAATGATC CTACCCAGAT CTTCTCTGTA ACTGGTGAAA GAGTTCCTCT GCATTGTGTC 
GACCGTCATC CTAACCAACA GCATGTTGTG GCAACAGGGG GACAGGATGG CATGCTGTGC 
ATCTGGGATG TCAGACATGG CAAAATGCCA ATGTCTCTGC TTAATGCTCA TAAAGCAGAA 
AAAGCTGAAA TGACAGAAAT GACAGTTCAT ATGGGGTATG TTCACATTGG GGCCCCTACA 
TGCCAGTGTG GGAAGTACAT TTCCATCCGT CAAACCCTGA TCATTTGTTT ACTTGCTCTG 
AGGATGGCTC TTTGTGGCAC TGGGATGCAT CAGCTGACAC TGAAAAGCCT ACCTTTCTCA 
TTGGGGGAAG GAGCACCTTT AACATTTCAC GTAGCAGTAT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P