| Gene Symbol | LOC542010 |
| Entrez Gene ID | 542010 |
| Full Name | outer cell layer5a |
| Synonyms | GRMZM2G130442,ocl5 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » LOC542010 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| XM_020551754.2 | XP_020407343.1 | outer cell layer5a isoform X1 |
| XM_020551754.1 | XP_020407343.1 | outer cell layer5a isoform X1 |
| NM_001111657.2 | NP_001105127.2 | outer cell layer5a |
Expression patterns of genes encoding HD-ZipIV homeo domain proteins define specific domains in maize embryos and meristems.
Ingram GC, Boisnard-Lorig C, Dumas C, Rogowsky PM
The Plant journal : for cell and molecular biology22(5)401-14(2000 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC542010 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC542010 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa22380 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001111657.2 | |
| Accession Version | NM_001111657.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-03-04 | |
| Organism | Zea mays | |
| Product | outer cell layer5a | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01002981.1. On May 15, 2015 this sequence version replaced NM_001111657.1. ##Evidence-Data-START## Transcript exon combination :: BT066376.1, SRR3147054.1718.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00780084, SAMN00780085 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGACGCCGG CAAGGCGCGT GCCGCCGGCG GCGATGATCG GCCGGAATGG CTTCGCGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001105127.2 |
| CDS | 236..2626 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001111657.2 |
1 | ATGACGCCGG CAAGGCGCGT GCCGCCGGCG GCGATGATCG GCCGGAATGG CTTCGCGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa60227 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020551754.2 , XM_020551754.1 | |
| Accession Version | XM_020551754.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-12-17 | |
| Organism | Zea mays | |
| Product | outer cell layer5a isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020551754.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCGATATC ACCAACGCTT CGCTGGAAGA AGGCGTCGTC ACAGACAGGG ATCGAAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020407343.1 |
| CDS | 209..2566 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020551754.2 |
1 | ATGCGATATC ACCAACGCTT CGCTGGAAGA AGGCGTCGTC ACAGACAGGG ATCGAAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa60227 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020551754.2 , XM_020551754.1 | |
| Accession Version | XM_020551754.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-03-19 | |
| Organism | Zea mays | |
| Product | outer cell layer5a isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCGATATC ACCAACGCTT CGCTGGAAGA AGGCGTCGTC ACAGACAGGG ATCGAAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020407343.1 |
| CDS | 211..2568 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020551754.1 |
1 | ATGCGATATC ACCAACGCTT CGCTGGAAGA AGGCGTCGTC ACAGACAGGG ATCGAAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Expression patterns of genes encoding HD-ZipIV homeo domain proteins define specific domains in maize embryos and meristems. |