Gene Symbol |
ACOX1 |
Entrez Gene ID |
513996 |
Full Name |
acyl-CoA oxidase 1 |
General protein information |
- Preferred Names
acyl-CoA oxidase 1
Names
peroxisomal acyl-coenzyme A oxidase 1 AOX acyl-Coenzyme A oxidase 1, palmitoyl palmitoyl-CoA oxidase
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_024980019.1 |
XP_024835787.1 |
peroxisomal acyl-coenzyme A oxidase 1 isoform X1 |
NM_001035289.3 |
NP_001030366.1 |
peroxisomal acyl-coenzyme A oxidase 1 |
XM_024980020.1 |
XP_024835788.1 |
peroxisomal acyl-coenzyme A oxidase 1 isoform X2 |
|
ACOX1 |
XP_001102134.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP011798 |
XP_320718.4 |
Caenorhabditis elegans (roundworm) |
F08A8.3 |
NP_493263.1 |
Arabidopsis thaliana (thale cress) |
ACX5 |
NP_181112.1 |
Bos taurus (cattle) |
ACOX1 |
NP_001030366.1 |
Mus musculus (house mouse) |
Acox1 |
NP_056544.2 |
Rattus norvegicus (Norway rat) |
Acox1 |
NP_059036.1 |
Caenorhabditis elegans (roundworm) |
F59F4.1 |
NP_510603.1 |
Arabidopsis thaliana (thale cress) |
ACX1 |
NP_567513.4 |
Homo sapiens (human) |
ACOX1 |
NP_009223.2 |
Pan troglodytes (chimpanzee) |
ACOX1 |
XP_001149084.1 |
Gallus gallus (chicken) |
ACOX1 |
NP_001006205.1 |
Oryza sativa (rice) |
Os06g0103500 |
NP_001056542.1 |
Canis lupus familiaris (dog) |
ACOX1 |
XP_003435209.1 |
Caenorhabditis elegans (roundworm) |
acox-1 |
NP_001021089.1 |
Danio rerio (zebrafish) |
acox1 |
NP_001005933.1 |
Drosophila melanogaster (fruit fly) |
CG5009 |
NP_611264.2 |
Caenorhabditis elegans (roundworm) |
F08A8.2 |
NP_493262.2 |
Caenorhabditis elegans (roundworm) |
F08A8.4 |
NP_493264.1 |
Caenorhabditis elegans (roundworm) |
C48B4.1 |
NP_499119.1 |
Xenopus tropicalis (tropical clawed frog) |
acox1 |
NP_001015762.1 |
Related articles in PubMed
Molecular characterization, polymorphism of the ACOX1 gene and association with ultrasound traits in Bos taurus.
Jiao Y, Zan LS, Liu YF, Wang HB
Genetics and molecular research : GMR10(3)1948-57(2011 Sep)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ACOX1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ACOX1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa44705 |
Clone ID Related Accession (Same CDS sequence) |
NM_001035289.3
|
Accession Version |
NM_001035289.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1983bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-24 |
Organism |
Bos taurus(cattle) |
Product |
peroxisomal acyl-coenzyme A oxidase 1 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC102761.2. On Aug 30, 2012 this sequence version replaced NM_001035289.2.
##Evidence-Data-START##
Transcript exon combination :: BC102761.2 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGAATCCAG ACCTGCAGAA AGAGCGGGCC GGCGCCAGCT TCAACCCGGA GCTGCTCACG AATGTCCTGG ACGGCAGCCC CGAGAACACT CGGCGCCGCC GAGAGATCGA GAACCTCATT CTGAACGACC CAGACTTCCA GCATGAGAAC TTGAATTTCC TCAGCCGTAG CCAGCGTTAC GAGGTGGCTG TTAAGAAGAG TGCCATCATG GTGCAGAAGA TGAGGAAGTT TGGCATCGCA GATCCTGCTG AAATCATGTG GTTTAAAAAA CTACATTTGG TCAATTTTGT GGAACCTGTG GGCCTCAATT ACTCCATGTT TATTCCTACC TTGCTGAATC AGGGCACCAC TGCTCAGCAA GAGAAATGGC TGCATTCATC CAAAGGACTC GAGATAATTG GCACCTACGC CCAGACGGAA ATGGGCCACG GAACCCATCT TCGAGGCTTG GAAACCACAG CCACTTATGA CCCTGAAACC CAGGAGTTCA TTCTCAACAG TCCTACTGTG ACCTCCATCA AGTGGTGGCC TGGTGGACTT GGAAAAACTT CAAATCATGC TATCGTACTT GCCCAGCTCT TCACTCAGGG AAAATGCTAT GGATTACATG CCTTCATTGT ACCTATTCGT GAACTTGGGA CCCATAAGCC TTTGCCAGGT ATTACTGTAG GAGACATTGG CCCCAAGTTT GGCTATGATG AGATGGATAA TGGCTACTTG AAGATGGACA ACTATCGTAT TCCCAGAGAA AACATGCTGA TGAAACATGC CCAGGTGAAG CCTGATGGCA CATACGTAAA ACCCCTGAAT AACAAGCTGA CCTACGGGAC CATGGTGTTC ATCAGGTCCT TCCTCGTGGG AGAATCCGCT CGGAGTCTGT CTAAGGCATG CACCATTGCC GTCCGATACA GTGCTGTGAG GCATCAGTCT GAAATCAACC CAGGTGAACC AGAACCACAG ATTTTGGATT ATCAAACCCA GCAATATAAA CTTTTCCCCC TCCTGGCCAC TGCCTATGCC TTCCAGTTTG TAGGCGCATA CATGAAAGAG ACCTATCTTC GGATTAATGA AGACATTGGC CATGGGGACC TGAGTGAGCT GCCTGAGCTT CACGCGCTCA CCGCTGGGCT GAAGGCTTTC ACGTCCTGGA CAACGAACAC AGCTATTGAA GCCTGTCGGA TGGCTTGTGG CGGACATGGC TATTCTCACT GCAGTGGACT TCCAAATATT TATGTCACTT TTACCCCAAC CTGCACCTTC GAGGGGGAAA ACACTGTCAT GATGCTGCAG ACAGCCAGGT TCCTGATGAA AAGTTACGAC CAGGTGCACT CAGGCAAGTT GGTGTGTGGC ATGGTGTCCT ACTTGAATGA CCTGCCCAGC CAGCGCATCC AGCCACAGCA GGTGGCTGTG TGGCCAACTA TGGTGGATAT CAACAGCCCC GACAGCCTGA CAGAGGCGTA CAAGCTTCGA GCGGCCAGAT TAGTAGAAAT TGCTGCTAAA AACCTTCAGA CTGAAGTGAT TCACAGAAAA AGCAAGGAGG TAGCGTGGAA CCTAACGTCC ATTGACCTTG TTCGGGCAAG TGAGGCACAT TGCCACTATG TGGTGGTTAA GCTCTTTACG GAAAAAGTCC TCCAGATTCA AGAGAAGTCC ATCCAAGCTG TCCTAAGGCG TTTGTGTCTC TTGTATTCTT TGTATGGAAT CAGTCAGAAT GCAGGGGATT TTCTTCAGGG GAGCATCATG ACAGAGTCTC AGATCACCCA GGTGAATGGG CGCATCAAGG AGCTGCTGAC TGCGATTCGC CCTGACGCGG TTGCTCTGGT GGATGCATTT GATTTTCAGG ATGTGACACT GGGCTCTGTG CTTGGCCGCT ATGATGGCAA TGTGTACGAA AACTTGTTTG AATGGGCCAA GAAATCCCCA CTGAACAAAA CAGAGGTCCA TGAGTCTTAC AAGCACCTAA AGTCGCTGCA GTCCAAGCTC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001030366.1 |
CDS | 52..2034 |
Translation | |
Target ORF information:
RefSeq Version | NM_001035289.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus acyl-CoA oxidase 1 (ACOX1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001035289.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGAATCCAG ACCTGCAGAA AGAGCGGGCC GGCGCCAGCT TCAACCCGGA GCTGCTCACG AATGTCCTGG ACGGCAGCCC CGAGAACACT CGGCGCCGCC GAGAGATCGA GAACCTCATT CTGAACGACC CAGACTTCCA GCATGAGAAC TTGAATTTCC TCAGCCGTAG CCAGCGTTAC GAGGTGGCTG TTAAGAAGAG TGCCATCATG GTGCAGAAGA TGAGGAAGTT TGGCATCGCA GATCCTGCTG AAATCATGTG GTTTAAAAAA CTACATTTGG TCAATTTTGT GGAACCTGTG GGCCTCAATT ACTCCATGTT TATTCCTACC TTGCTGAATC AGGGCACCAC TGCTCAGCAA GAGAAATGGC TGCATTCATC CAAAGGACTC GAGATAATTG GCACCTACGC CCAGACGGAA ATGGGCCACG GAACCCATCT TCGAGGCTTG GAAACCACAG CCACTTATGA CCCTGAAACC CAGGAGTTCA TTCTCAACAG TCCTACTGTG ACCTCCATCA AGTGGTGGCC TGGTGGACTT GGAAAAACTT CAAATCATGC TATCGTACTT GCCCAGCTCT TCACTCAGGG AAAATGCTAT GGATTACATG CCTTCATTGT ACCTATTCGT GAACTTGGGA CCCATAAGCC TTTGCCAGGT ATTACTGTAG GAGACATTGG CCCCAAGTTT GGCTATGATG AGATGGATAA TGGCTACTTG AAGATGGACA ACTATCGTAT TCCCAGAGAA AACATGCTGA TGAAACATGC CCAGGTGAAG CCTGATGGCA CATACGTAAA ACCCCTGAAT AACAAGCTGA CCTACGGGAC CATGGTGTTC ATCAGGTCCT TCCTCGTGGG AGAATCCGCT CGGAGTCTGT CTAAGGCATG CACCATTGCC GTCCGATACA GTGCTGTGAG GCATCAGTCT GAAATCAACC CAGGTGAACC AGAACCACAG ATTTTGGATT ATCAAACCCA GCAATATAAA CTTTTCCCCC TCCTGGCCAC TGCCTATGCC TTCCAGTTTG TAGGCGCATA CATGAAAGAG ACCTATCTTC GGATTAATGA AGACATTGGC CATGGGGACC TGAGTGAGCT GCCTGAGCTT CACGCGCTCA CCGCTGGGCT GAAGGCTTTC ACGTCCTGGA CAACGAACAC AGCTATTGAA GCCTGTCGGA TGGCTTGTGG CGGACATGGC TATTCTCACT GCAGTGGACT TCCAAATATT TATGTCACTT TTACCCCAAC CTGCACCTTC GAGGGGGAAA ACACTGTCAT GATGCTGCAG ACAGCCAGGT TCCTGATGAA AAGTTACGAC CAGGTGCACT CAGGCAAGTT GGTGTGTGGC ATGGTGTCCT ACTTGAATGA CCTGCCCAGC CAGCGCATCC AGCCACAGCA GGTGGCTGTG TGGCCAACTA TGGTGGATAT CAACAGCCCC GACAGCCTGA CAGAGGCGTA CAAGCTTCGA GCGGCCAGAT TAGTAGAAAT TGCTGCTAAA AACCTTCAGA CTGAAGTGAT TCACAGAAAA AGCAAGGAGG TAGCGTGGAA CCTAACGTCC ATTGACCTTG TTCGGGCAAG TGAGGCACAT TGCCACTATG TGGTGGTTAA GCTCTTTACG GAAAAAGTCC TCCAGATTCA AGAGAAGTCC ATCCAAGCTG TCCTAAGGCG TTTGTGTCTC TTGTATTCTT TGTATGGAAT CAGTCAGAAT GCAGGGGATT TTCTTCAGGG GAGCATCATG ACAGAGTCTC AGATCACCCA GGTGAATGGG CGCATCAAGG AGCTGCTGAC TGCGATTCGC CCTGACGCGG TTGCTCTGGT GGATGCATTT GATTTTCAGG ATGTGACACT GGGCTCTGTG CTTGGCCGCT ATGATGGCAA TGTGTACGAA AACTTGTTTG AATGGGCCAA GAAATCCCCA CTGAACAAAA CAGAGGTCCA TGAGTCTTAC AAGCACCTAA AGTCGCTGCA GTCCAAGCTC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa226268 |
Clone ID Related Accession (Same CDS sequence) |
XM_024980019.1
|
Accession Version |
XM_024980019.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1983bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
peroxisomal acyl-coenzyme A oxidase 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037346.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGAATCCAG ACCTGCAGAA AGAGCGGGCC GGCGCCAGCT TCAACCCGGA GCTGCTCACG AATGTCCTGG ACGGCAGCCC CGAGAACACT CGGCGCCGCC GAGAGATCGA GAACCTCATT CTGAACGACC CAGACTTCCA GCATGAGAAC TTGAATTTCC TCAGCCGTAG CCAGCGTTAC GAGGTGGCTG TTAAGAAGAG TGCCATCATG GTGCAGAAGA TGAGGAAGTT TGGCATCGCA GATCCTGCTG AAATCATGTG GTTTAAAAAC TTTGTGAATC GAGGGCGGCC TGCGCCTCTG GATCTTCACT TGGGCATGTT CCTGCCCACC TTGCTGCACC AGGCAACCGA GGAACAGCAG GAGCGCTTCT TCATGCCTGC CTGGAACTTG GAGATCATTG GCACTTATGC CCAAACAGAG ATGGGTCATG GAACCCATCT TCGAGGCTTG GAAACCACAG CCACTTATGA CCCTGAAACC CAGGAGTTCA TTCTCAACAG TCCTACTGTG ACCTCCATCA AGTGGTGGCC TGGTGGACTT GGAAAAACTT CAAATCATGC TATCGTACTT GCCCAGCTCT TCACTCAGGG AAAATGCTAT GGATTACATG CCTTCATTGT ACCTATTCGT GAACTTGGGA CCCATAAGCC TTTGCCAGGT ATTACTGTAG GAGACATTGG CCCCAAGTTT GGCTATGATG AGATGGATAA TGGCTACTTG AAGATGGACA ACTATCGTAT TCCCAGAGAA AACATGCTGA TGAAACATGC CCAGGTGAAG CCTGATGGCA CATACGTAAA ACCCCTGAAT AACAAGCTGA CCTACGGGAC CATGGTGTTC ATCAGGTCCT TCCTCGTGGG AGAATCCGCT CGGAGTCTGT CTAAGGCATG CACCATTGCC GTCCGATACA GTGCTGTGAG GCATCAGTCT GAAATCAACC CAGGTGAACC AGAACCACAG ATTTTGGATT ATCAAACCCA GCAATATAAA CTTTTCCCCC TCCTGGCCAC TGCCTATGCC TTCCAGTTTG TAGGCGCATA CATGAAAGAG ACCTATCTTC GGATTAATGA AGACATTGGC CATGGGGACC TGAGTGAGCT GCCTGAGCTT CACGCGCTCA CCGCTGGGCT GAAGGCTTTC ACGTCCTGGA CAACGAACAC AGCTATTGAA GCCTGTCGGA TGGCTTGTGG CGGACATGGC TATTCTCACT GCAGTGGACT TCCAAATATT TATGTCACTT TTACCCCAAC CTGCACCTTC GAGGGGGAAA ACACTGTCAT GATGCTGCAG ACAGCCAGGT TCCTGATGAA AAGTTACGAC CAGGTGCACT CAGGCAAGTT GGTGTGTGGC ATGGTGTCCT ACTTGAATGA CCTGCCCAGC CAGCGCATCC AGCCACAGCA GGTGGCTGTG TGGCCAACTA TGGTGGATAT CAACAGCCCC GACAGCCTGA CAGAGGCGTA CAAGCTTCGA GCGGCCAGAT TAGTAGAAAT TGCTGCTAAA AACCTTCAGA CTGAAGTGAT TCACAGAAAA AGCAAGGAGG TAGCGTGGAA CCTAACGTCC ATTGACCTTG TTCGGGCAAG TGAGGCACAT TGCCACTATG TGGTGGTTAA GCTCTTTACG GAAAAAGTCC TCCAGATTCA AGAGAAGTCC ATCCAAGCTG TCCTAAGGCG TTTGTGTCTC TTGTATTCTT TGTATGGAAT CAGTCAGAAT GCAGGGGATT TTCTTCAGGG GAGCATCATG ACAGAGTCTC AGATCACCCA GGTGAATGGG CGCATCAAGG AGCTGCTGAC TGCAATTCGC CCTGACGCGG TTGCTCTGGT GGATGCATTT GATTTTCAGG ATGTGACACT GGGCTCTGTG CTTGGCCGCT ATGATGGAAA TGTGTACGAA AACTTGTTTG AATGGGCCAA GAAATCCCCA CTGAACAAAA CAGAGGTCCA TGAGTCTTAC AAGCACCTAA AGTCGCTGCA GTCCAAGCTC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024835787.1 |
CDS | 411..2393 |
Translation | |
Target ORF information:
RefSeq Version | XM_024980019.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus acyl-CoA oxidase 1 (ACOX1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024980019.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGAATCCAG ACCTGCAGAA AGAGCGGGCC GGCGCCAGCT TCAACCCGGA GCTGCTCACG AATGTCCTGG ACGGCAGCCC CGAGAACACT CGGCGCCGCC GAGAGATCGA GAACCTCATT CTGAACGACC CAGACTTCCA GCATGAGAAC TTGAATTTCC TCAGCCGTAG CCAGCGTTAC GAGGTGGCTG TTAAGAAGAG TGCCATCATG GTGCAGAAGA TGAGGAAGTT TGGCATCGCA GATCCTGCTG AAATCATGTG GTTTAAAAAC TTTGTGAATC GAGGGCGGCC TGCGCCTCTG GATCTTCACT TGGGCATGTT CCTGCCCACC TTGCTGCACC AGGCAACCGA GGAACAGCAG GAGCGCTTCT TCATGCCTGC CTGGAACTTG GAGATCATTG GCACTTATGC CCAAACAGAG ATGGGTCATG GAACCCATCT TCGAGGCTTG GAAACCACAG CCACTTATGA CCCTGAAACC CAGGAGTTCA TTCTCAACAG TCCTACTGTG ACCTCCATCA AGTGGTGGCC TGGTGGACTT GGAAAAACTT CAAATCATGC TATCGTACTT GCCCAGCTCT TCACTCAGGG AAAATGCTAT GGATTACATG CCTTCATTGT ACCTATTCGT GAACTTGGGA CCCATAAGCC TTTGCCAGGT ATTACTGTAG GAGACATTGG CCCCAAGTTT GGCTATGATG AGATGGATAA TGGCTACTTG AAGATGGACA ACTATCGTAT TCCCAGAGAA AACATGCTGA TGAAACATGC CCAGGTGAAG CCTGATGGCA CATACGTAAA ACCCCTGAAT AACAAGCTGA CCTACGGGAC CATGGTGTTC ATCAGGTCCT TCCTCGTGGG AGAATCCGCT CGGAGTCTGT CTAAGGCATG CACCATTGCC GTCCGATACA GTGCTGTGAG GCATCAGTCT GAAATCAACC CAGGTGAACC AGAACCACAG ATTTTGGATT ATCAAACCCA GCAATATAAA CTTTTCCCCC TCCTGGCCAC TGCCTATGCC TTCCAGTTTG TAGGCGCATA CATGAAAGAG ACCTATCTTC GGATTAATGA AGACATTGGC CATGGGGACC TGAGTGAGCT GCCTGAGCTT CACGCGCTCA CCGCTGGGCT GAAGGCTTTC ACGTCCTGGA CAACGAACAC AGCTATTGAA GCCTGTCGGA TGGCTTGTGG CGGACATGGC TATTCTCACT GCAGTGGACT TCCAAATATT TATGTCACTT TTACCCCAAC CTGCACCTTC GAGGGGGAAA ACACTGTCAT GATGCTGCAG ACAGCCAGGT TCCTGATGAA AAGTTACGAC CAGGTGCACT CAGGCAAGTT GGTGTGTGGC ATGGTGTCCT ACTTGAATGA CCTGCCCAGC CAGCGCATCC AGCCACAGCA GGTGGCTGTG TGGCCAACTA TGGTGGATAT CAACAGCCCC GACAGCCTGA CAGAGGCGTA CAAGCTTCGA GCGGCCAGAT TAGTAGAAAT TGCTGCTAAA AACCTTCAGA CTGAAGTGAT TCACAGAAAA AGCAAGGAGG TAGCGTGGAA CCTAACGTCC ATTGACCTTG TTCGGGCAAG TGAGGCACAT TGCCACTATG TGGTGGTTAA GCTCTTTACG GAAAAAGTCC TCCAGATTCA AGAGAAGTCC ATCCAAGCTG TCCTAAGGCG TTTGTGTCTC TTGTATTCTT TGTATGGAAT CAGTCAGAAT GCAGGGGATT TTCTTCAGGG GAGCATCATG ACAGAGTCTC AGATCACCCA GGTGAATGGG CGCATCAAGG AGCTGCTGAC TGCAATTCGC CCTGACGCGG TTGCTCTGGT GGATGCATTT GATTTTCAGG ATGTGACACT GGGCTCTGTG CTTGGCCGCT ATGATGGAAA TGTGTACGAA AACTTGTTTG AATGGGCCAA GAAATCCCCA CTGAACAAAA CAGAGGTCCA TGAGTCTTAC AAGCACCTAA AGTCGCTGCA GTCCAAGCTC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa226269 |
Clone ID Related Accession (Same CDS sequence) |
XM_024980020.1
|
Accession Version |
XM_024980020.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1779bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
peroxisomal acyl-coenzyme A oxidase 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037346.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGCTGCAT TCATCCAAAG GACTCGAGAT AATTGGCACC TACGCCCAGA CGGAAATGGG CCACGCTTTG TGAATCGAGG GCGGCCTGCG CCTCTGGATC TTCACTTGGG CATGTTCCTG CCCACCTTGC TGCACCAGGC AACCGAGGAA CAGCAGGAGC GCTTCTTCAT GCCTGCCTGG AACTTGGAGA TCATTGGCAC TTATGCCCAA ACAGAGATGG GTCATGGAAC CCATCTTCGA GGCTTGGAAA CCACAGCCAC TTATGACCCT GAAACCCAGG AGTTCATTCT CAACAGTCCT ACTGTGACCT CCATCAAGTG GTGGCCTGGT GGACTTGGAA AAACTTCAAA TCATGCTATC GTACTTGCCC AGCTCTTCAC TCAGGGAAAA TGCTATGGAT TACATGCCTT CATTGTACCT ATTCGTGAAC TTGGGACCCA TAAGCCTTTG CCAGGTATTA CTGTAGGAGA CATTGGCCCC AAGTTTGGCT ATGATGAGAT GGATAATGGC TACTTGAAGA TGGACAACTA TCGTATTCCC AGAGAAAACA TGCTGATGAA ACATGCCCAG GTGAAGCCTG ATGGCACATA CGTAAAACCC CTGAATAACA AGCTGACCTA CGGGACCATG GTGTTCATCA GGTCCTTCCT CGTGGGAGAA TCCGCTCGGA GTCTGTCTAA GGCATGCACC ATTGCCGTCC GATACAGTGC TGTGAGGCAT CAGTCTGAAA TCAACCCAGG TGAACCAGAA CCACAGATTT TGGATTATCA AACCCAGCAA TATAAACTTT TCCCCCTCCT GGCCACTGCC TATGCCTTCC AGTTTGTAGG CGCATACATG AAAGAGACCT ATCTTCGGAT TAATGAAGAC ATTGGCCATG GGGACCTGAG TGAGCTGCCT GAGCTTCACG CGCTCACCGC TGGGCTGAAG GCTTTCACGT CCTGGACAAC GAACACAGCT ATTGAAGCCT GTCGGATGGC TTGTGGCGGA CATGGCTATT CTCACTGCAG TGGACTTCCA AATATTTATG TCACTTTTAC CCCAACCTGC ACCTTCGAGG GGGAAAACAC TGTCATGATG CTGCAGACAG CCAGGTTCCT GATGAAAAGT TACGACCAGG TGCACTCAGG CAAGTTGGTG TGTGGCATGG TGTCCTACTT GAATGACCTG CCCAGCCAGC GCATCCAGCC ACAGCAGGTG GCTGTGTGGC CAACTATGGT GGATATCAAC AGCCCCGACA GCCTGACAGA GGCGTACAAG CTTCGAGCGG CCAGATTAGT AGAAATTGCT GCTAAAAACC TTCAGACTGA AGTGATTCAC AGAAAAAGCA AGGAGGTAGC GTGGAACCTA ACGTCCATTG ACCTTGTTCG GGCAAGTGAG GCACATTGCC ACTATGTGGT GGTTAAGCTC TTTACGGAAA AAGTCCTCCA GATTCAAGAG AAGTCCATCC AAGCTGTCCT AAGGCGTTTG TGTCTCTTGT ATTCTTTGTA TGGAATCAGT CAGAATGCAG GGGATTTTCT TCAGGGGAGC ATCATGACAG AGTCTCAGAT CACCCAGGTG AATGGGCGCA TCAAGGAGCT GCTGACTGCA ATTCGCCCTG ACGCGGTTGC TCTGGTGGAT GCATTTGATT TTCAGGATGT GACACTGGGC TCTGTGCTTG GCCGCTATGA TGGAAATGTG TACGAAAACT TGTTTGAATG GGCCAAGAAA TCCCCACTGA ACAAAACAGA GGTCCATGAG TCTTACAAGC ACCTAAAGTC GCTGCAGTCC AAGCTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024835788.1 |
CDS | 454..2232 |
Translation | |
Target ORF information:
RefSeq Version | XM_024980020.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus acyl-CoA oxidase 1 (ACOX1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024980020.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGCTGCAT TCATCCAAAG GACTCGAGAT AATTGGCACC TACGCCCAGA CGGAAATGGG CCACGCTTTG TGAATCGAGG GCGGCCTGCG CCTCTGGATC TTCACTTGGG CATGTTCCTG CCCACCTTGC TGCACCAGGC AACCGAGGAA CAGCAGGAGC GCTTCTTCAT GCCTGCCTGG AACTTGGAGA TCATTGGCAC TTATGCCCAA ACAGAGATGG GTCATGGAAC CCATCTTCGA GGCTTGGAAA CCACAGCCAC TTATGACCCT GAAACCCAGG AGTTCATTCT CAACAGTCCT ACTGTGACCT CCATCAAGTG GTGGCCTGGT GGACTTGGAA AAACTTCAAA TCATGCTATC GTACTTGCCC AGCTCTTCAC TCAGGGAAAA TGCTATGGAT TACATGCCTT CATTGTACCT ATTCGTGAAC TTGGGACCCA TAAGCCTTTG CCAGGTATTA CTGTAGGAGA CATTGGCCCC AAGTTTGGCT ATGATGAGAT GGATAATGGC TACTTGAAGA TGGACAACTA TCGTATTCCC AGAGAAAACA TGCTGATGAA ACATGCCCAG GTGAAGCCTG ATGGCACATA CGTAAAACCC CTGAATAACA AGCTGACCTA CGGGACCATG GTGTTCATCA GGTCCTTCCT CGTGGGAGAA TCCGCTCGGA GTCTGTCTAA GGCATGCACC ATTGCCGTCC GATACAGTGC TGTGAGGCAT CAGTCTGAAA TCAACCCAGG TGAACCAGAA CCACAGATTT TGGATTATCA AACCCAGCAA TATAAACTTT TCCCCCTCCT GGCCACTGCC TATGCCTTCC AGTTTGTAGG CGCATACATG AAAGAGACCT ATCTTCGGAT TAATGAAGAC ATTGGCCATG GGGACCTGAG TGAGCTGCCT GAGCTTCACG CGCTCACCGC TGGGCTGAAG GCTTTCACGT CCTGGACAAC GAACACAGCT ATTGAAGCCT GTCGGATGGC TTGTGGCGGA CATGGCTATT CTCACTGCAG TGGACTTCCA AATATTTATG TCACTTTTAC CCCAACCTGC ACCTTCGAGG GGGAAAACAC TGTCATGATG CTGCAGACAG CCAGGTTCCT GATGAAAAGT TACGACCAGG TGCACTCAGG CAAGTTGGTG TGTGGCATGG TGTCCTACTT GAATGACCTG CCCAGCCAGC GCATCCAGCC ACAGCAGGTG GCTGTGTGGC CAACTATGGT GGATATCAAC AGCCCCGACA GCCTGACAGA GGCGTACAAG CTTCGAGCGG CCAGATTAGT AGAAATTGCT GCTAAAAACC TTCAGACTGA AGTGATTCAC AGAAAAAGCA AGGAGGTAGC GTGGAACCTA ACGTCCATTG ACCTTGTTCG GGCAAGTGAG GCACATTGCC ACTATGTGGT GGTTAAGCTC TTTACGGAAA AAGTCCTCCA GATTCAAGAG AAGTCCATCC AAGCTGTCCT AAGGCGTTTG TGTCTCTTGT ATTCTTTGTA TGGAATCAGT CAGAATGCAG GGGATTTTCT TCAGGGGAGC ATCATGACAG AGTCTCAGAT CACCCAGGTG AATGGGCGCA TCAAGGAGCT GCTGACTGCA ATTCGCCCTG ACGCGGTTGC TCTGGTGGAT GCATTTGATT TTCAGGATGT GACACTGGGC TCTGTGCTTG GCCGCTATGA TGGAAATGTG TACGAAAACT TGTTTGAATG GGCCAAGAAA TCCCCACTGA ACAAAACAGA GGTCCATGAG TCTTACAAGC ACCTAAAGTC GCTGCAGTCC AAGCTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |