Gene Symbol | ctr9 |
Entrez Gene ID | 100036549 |
Full Name | CTR9 homolog, Paf1/RNA polymerase II complex component |
Synonyms | fc54a06,wu:fc54a06 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » ctr9 cDNA ORF clone
Gene Symbol | ctr9 |
Entrez Gene ID | 100036549 |
Full Name | CTR9 homolog, Paf1/RNA polymerase II complex component |
Synonyms | fc54a06,wu:fc54a06 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001083583.1 | NP_001077052.1 | RNA polymerase-associated protein CTR9 homolog |
Caenorhabditis elegans (roundworm) | B0464.2 | NP_001254998.1 |
Canis lupus familiaris (dog) | CTR9 | XP_003639833.1 |
Drosophila melanogaster (fruit fly) | CG2469 | NP_788448.1 |
Xenopus tropicalis (tropical clawed frog) | ctr9 | NP_001005076.1 |
Bos taurus (cattle) | CTR9 | NP_001192326.1 |
Gallus gallus (chicken) | CTR9 | XP_420968.3 |
Danio rerio (zebrafish) | ctr9 | NP_001077052.1 |
Rattus norvegicus (Norway rat) | Ctr9 | NP_001094131.1 |
Oryza sativa (rice) | Os07g0476200 | NP_001059625.1 |
Homo sapiens (human) | CTR9 | NP_055448.1 |
Pan troglodytes (chimpanzee) | CTR9 | XP_521841.3 |
CTR9 | XP_001094093.2 | |
Mus musculus (house mouse) | Ctr9 | NP_033457.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001559 | XP_321554.1 |
Arabidopsis thaliana (thale cress) | ELF8 | NP_178674.6 |
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
MMAPPR: mutation mapping analysis pipeline for pooled RNA-seq.
Hill JT, Demarest BL, Bisgrove BW, Gorsi B, Su YC, Yost HJ
Genome research23(4)687-97(2013 Apr)
The PAF1 complex differentially regulates cardiomyocyte specification.
Langenbacher AD, Nguyen CT, Cavanaugh AM, Huang J, Lu F, Chen JN
Developmental biology353(1)19-28(2011 May)
TIF1gamma controls erythroid cell fate by regulating transcription elongation.
Bai X, Kim J, Yang Z, Jurynec MJ, Akie TE, Lee J, LeBlanc J, Sessa A, Jiang H, DiBiase A, Zhou Y, Grunwald DJ, Lin S, Cantor AB, Orkin SH, Zon LI
Cell142(1)133-43(2010 Jul)
Paf1 complex homologues are required for Notch-regulated transcription during somite segmentation.
Akanuma T, Koshida S, Kawamura A, Kishimoto Y, Takada S
EMBO reports8(9)858-63(2007 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ctr9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ctr9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa04266 | |
Clone ID Related Accession (Same CDS sequence) | NM_001083583.1 | |
Accession Version | NM_001083583.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3483bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | RNA polymerase-associated protein CTR9 homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB286670.1. ##Evidence-Data-START## Transcript exon combination :: AB286670.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTCTCGGG GATCCATTGA AATCCCTCTG CGGGACACAG ATGAGGTAAT CGAGCTCGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001077052.1 |
CDS | 107..3589 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001083583.1 |
1 | ATGTCTCGGG GATCCATTGA AATCCCTCTG CGGGACACAG ATGAGGTAAT CGAGCTCGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RFX transcription factors are essential for hearing in mice. |
MMAPPR: mutation mapping analysis pipeline for pooled RNA-seq. |
The PAF1 complex differentially regulates cardiomyocyte specification. |
TIF1gamma controls erythroid cell fate by regulating transcription elongation. |
Paf1 complex homologues are required for Notch-regulated transcription during somite segmentation. |