Gene Symbol | actn4 |
Entrez Gene ID | 322221 |
Full Name | actinin, alpha 4 |
Synonyms | wu:fb53f05,zgc:63508 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » actn4 cDNA ORF clone
Gene Symbol | actn4 |
Entrez Gene ID | 322221 |
Full Name | actinin, alpha 4 |
Synonyms | wu:fb53f05,zgc:63508 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021481334.1 | XP_021337009.1 | alpha-actinin-4 isoform X1 |
XM_021481337.1 | XP_021337012.1 | alpha-actinin-4 isoform X4 |
NM_199586.1 | NP_955880.1 | alpha-actinin-4 |
XM_021481335.1 | XP_021337010.1 | alpha-actinin-4 isoform X2 |
XM_021481338.1 | XP_021337013.1 | alpha-actinin-4 isoform X5 |
XM_021481336.1 | XP_021337011.1 | alpha-actinin-4 isoform X3 |
XM_021481339.1 | XP_021337014.1 | alpha-actinin-4 isoform X6 |
ACTN4 | XP_001083825.1 | |
Danio rerio (zebrafish) | actn4 | NP_955880.1 |
Pan troglodytes (chimpanzee) | ACTN4 | XP_003954421.1 |
Rattus norvegicus (Norway rat) | Actn4 | NP_113863.2 |
Homo sapiens (human) | ACTN4 | NP_004915.2 |
Bos taurus (cattle) | ACTN4 | NP_001091521.1 |
Schizosaccharomyces pombe (fission yeast) | ain1 | NP_594295.1 |
Canis lupus familiaris (dog) | ACTN4 | XP_541640.2 |
Mus musculus (house mouse) | Actn4 | NP_068695.1 |
Gallus gallus (chicken) | ACTN4 | NP_990457.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_06475 | XP_003717088.1 |
Neurospora crassa | NCU06429 | XP_957320.1 |
Xenopus tropicalis (tropical clawed frog) | actn4 | NP_001006810.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
New classes of mind bomb-interacting proteins identified from yeast two-hybrid screens.
Tseng LC, Zhang C, Cheng CM, Xu H, Hsu CH, Jiang YJ
PloS one9(4)e93394(2014)
?-Actinin-2 deficiency results in sarcomeric defects in zebrafish that cannot be rescued by ?-actinin-3 revealing functional differences between sarcomeric isoforms.
Gupta V, Discenza M, Guyon JR, Kunkel LM, Beggs AH
FASEB journal : official publication of the Federation of American Societies for Experimental Biology26(5)1892-908(2012 May)
Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung.
Zheng W, Wang Z, Collins JE, Andrews RM, Stemple D, Gong Z
PloS one6(8)e24019(2011)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following actn4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the actn4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa04952 | |
Clone ID Related Accession (Same CDS sequence) | NM_199586.1 | |
Accession Version | NM_199586.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | alpha-actinin-4 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054901.1. On Jul 6, 2005 this sequence version replaced XM_690966.1. ##Evidence-Data-START## Transcript exon combination :: BC054901.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_955880.1 |
CDS | 156..2861 |
Translation |
Target ORF information:
Target ORF information:
|
NM_199586.1 |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148921 | |
Clone ID Related Accession (Same CDS sequence) | XM_021481334.1 , XM_021481335.1 | |
Accession Version | XM_021481334.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2772bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | alpha-actinin-4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021337009.1 |
CDS | 184..2955 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021481334.1 |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148921 | |
Clone ID Related Accession (Same CDS sequence) | XM_021481334.1 , XM_021481335.1 | |
Accession Version | XM_021481335.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2772bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | alpha-actinin-4 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021337010.1 |
CDS | 184..2955 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021481335.1 |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148922 | |
Clone ID Related Accession (Same CDS sequence) | XM_021481336.1 | |
Accession Version | XM_021481336.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2772bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | alpha-actinin-4 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021337011.1 |
CDS | 184..2955 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021481336.1 |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148923 | |
Clone ID Related Accession (Same CDS sequence) | XM_021481337.1 | |
Accession Version | XM_021481337.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | alpha-actinin-4 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021337012.1 |
CDS | 184..2889 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021481337.1 |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148924 | |
Clone ID Related Accession (Same CDS sequence) | XM_021481338.1 | |
Accession Version | XM_021481338.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2691bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | alpha-actinin-4 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021337013.1 |
CDS | 184..2874 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021481338.1 |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148925 | |
Clone ID Related Accession (Same CDS sequence) | XM_021481339.1 | |
Accession Version | XM_021481339.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2691bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | alpha-actinin-4 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021337014.1 |
CDS | 184..2874 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021481339.1 |
1 | ATGGTAGATT ATCACGCCGT TAATAATCAA GGCCAGTATT CAGCGGGCGG GCCACCGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
New classes of mind bomb-interacting proteins identified from yeast two-hybrid screens. |
?-Actinin-2 deficiency results in sarcomeric defects in zebrafish that cannot be rescued by ?-actinin-3 revealing functional differences between sarcomeric isoforms. |
Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung. |